Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01261 GCCGCCTCTAATTCGAACTCAACTGGTAATCTCAACGCCCAAAACTCTCTCCAGTCCATCTGCTACGAACGCGGTTCTCTTCGTCTTCTCGATCAGAGAAAGCTTCCTCTTGAAACTTTTTATCTGGATATCAAGGATGCAGCAGGTGGATGGCATGCGATAAGTGATATGGTGGTCCGTGGAGCACCTGCTATTGCAATTGCAGCCGCTCTCTCGTTGGCCGTCGAAGTTTTTAACTTGAGGGATTTTGGAGGGACCTCTAATGATGCAGCTATTTTTCTTAGCAATAAGCTGGATTACCTAGTTTCCAGCCGGCCAACTGCTGTGAATCTCTCTGATGCTGCTACAAAACTCAAACAAATAGTTTCAGAGGCATGTTCTACTTCGTCGAAATACAGCAGCATTTTCCAGGCCTACATTGAGGCTGCTGAATCAATGCTTAAGGACGATGTTGCTTCAAATAAAGCGATTGGGTCATATGGAGCAGATTTTATCCAGGATCAACATAAATTATTGAACAAACTCTCTGTTCTAACCCACTGCAACACTGGCAGTCTTGCGACGGCTGGATATGGAACTGCCCTAGGTGTGATTCGCTCACTTCATGCTGAAGGGGTCTTAGAAAGAGCCTACTGTACCGAAACAAGGCCATTTAATCAAGGATCCAGATTGACAGCATATGAGTTGGTGCATGAAAAAATACCTGCCACTCTCGTTGCAGATTCTGCTGCAGCTGCACTTATGCAACTAGGATGTGTGAATGCTGTCATTGTCGGAGCAGATCGTGTGGCTGCTAATGGCGATACGGCTAACAAGATTGGAACTTACAATCTGGCCTTAAGTGCAATGTATCACAAGGTCCCGTTTTATGTGGCAGCCCCATTGACTTCCGTAGATTTATCCCTTTCTTCTGGCCAAGAGATTGTCATTGAAGAACGGTCGCCTAAAGAGTTATTGCACTCCCGGGGCGGTCTTGGGGAGCAAGTTGCAGCTTCTGGAATCTCGGTCTGGAATCCGGCATTCGATGTTACCCCAGCTTCTCTCATATCAGGGATCATAACAGAAAAGGGGGTGATCACCAAGGAGAGTGGTGATGGTTTTGACATTAAGGGATTCGTCAATCGGGGAGGTGGGCGGGCCGCT 1143 47.07 AASNSNSTGNLNAQNSLQSICYERGSLRLLDQRKLPLETFYLDIKDAAGGWHAISDMVVRGAPAIAIAAALSLAVEVFNLRDFGGTSNDAAIFLSNKLDYLVSSRPTAVNLSDAATKLKQIVSEACSTSSKYSSIFQAYIEAAESMLKDDVASNKAIGSYGADFIQDQHKLLNKLSVLTHCNTGSLATAGYGTALGVIRSLHAEGVLERAYCTETRPFNQGSRLTAYELVHEKIPATLVADSAAAALMQLGCVNAVIVGADRVAANGDTANKIGTYNLALSAMYHKVPFYVAAPLTSVDLSLSSGQEIVIEERSPKELLHSRGGLGEQVAASGISVWNPAFDVTPASLISGIITEKGVITKESGDGFDIKGFVNRGGGRAA 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44244658 44247863 + Bda034145 Bda09g01261 13511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01261 381 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 15 373 - -
Bda09g01261 381 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
Bda09g01261 381 Gene3D - 172 368 IPR042529 -
Bda09g01261 381 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 15 373 - -
Bda09g01261 381 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Bda09g01261 381 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237
Bda09g01261 381 Gene3D - 15 171 IPR027363 -
Bda09g01261 381 SUPERFAMILY NagB/RpiA/CoA transferase-like 15 362 IPR037171 -
Bda09g01261 381 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 47 361 IPR011559 GO:0044249
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01060 Bda-Chr9:40812964 Bda09g01261 Bda-Chr9:44244658 0 dispersed
Bda09g01261 Bda-Chr9:44244658 Bda11g00117 Bda-Chr11:1614800 2.30E-09 dispersed
Bda09g01261 Bda-Chr9:44244658 Bda01g01886 Bda-Chr1:55032435 2.79E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01261 K08963 - csv:101210526 569.311