Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01261 | GCCGCCTCTAATTCGAACTCAACTGGTAATCTCAACGCCCAAAACTCTCTCCAGTCCATCTGCTACGAACGCGGTTCTCTTCGTCTTCTCGATCAGAGAAAGCTTCCTCTTGAAACTTTTTATCTGGATATCAAGGATGCAGCAGGTGGATGGCATGCGATAAGTGATATGGTGGTCCGTGGAGCACCTGCTATTGCAATTGCAGCCGCTCTCTCGTTGGCCGTCGAAGTTTTTAACTTGAGGGATTTTGGAGGGACCTCTAATGATGCAGCTATTTTTCTTAGCAATAAGCTGGATTACCTAGTTTCCAGCCGGCCAACTGCTGTGAATCTCTCTGATGCTGCTACAAAACTCAAACAAATAGTTTCAGAGGCATGTTCTACTTCGTCGAAATACAGCAGCATTTTCCAGGCCTACATTGAGGCTGCTGAATCAATGCTTAAGGACGATGTTGCTTCAAATAAAGCGATTGGGTCATATGGAGCAGATTTTATCCAGGATCAACATAAATTATTGAACAAACTCTCTGTTCTAACCCACTGCAACACTGGCAGTCTTGCGACGGCTGGATATGGAACTGCCCTAGGTGTGATTCGCTCACTTCATGCTGAAGGGGTCTTAGAAAGAGCCTACTGTACCGAAACAAGGCCATTTAATCAAGGATCCAGATTGACAGCATATGAGTTGGTGCATGAAAAAATACCTGCCACTCTCGTTGCAGATTCTGCTGCAGCTGCACTTATGCAACTAGGATGTGTGAATGCTGTCATTGTCGGAGCAGATCGTGTGGCTGCTAATGGCGATACGGCTAACAAGATTGGAACTTACAATCTGGCCTTAAGTGCAATGTATCACAAGGTCCCGTTTTATGTGGCAGCCCCATTGACTTCCGTAGATTTATCCCTTTCTTCTGGCCAAGAGATTGTCATTGAAGAACGGTCGCCTAAAGAGTTATTGCACTCCCGGGGCGGTCTTGGGGAGCAAGTTGCAGCTTCTGGAATCTCGGTCTGGAATCCGGCATTCGATGTTACCCCAGCTTCTCTCATATCAGGGATCATAACAGAAAAGGGGGTGATCACCAAGGAGAGTGGTGATGGTTTTGACATTAAGGGATTCGTCAATCGGGGAGGTGGGCGGGCCGCT | 1143 | 47.07 | AASNSNSTGNLNAQNSLQSICYERGSLRLLDQRKLPLETFYLDIKDAAGGWHAISDMVVRGAPAIAIAAALSLAVEVFNLRDFGGTSNDAAIFLSNKLDYLVSSRPTAVNLSDAATKLKQIVSEACSTSSKYSSIFQAYIEAAESMLKDDVASNKAIGSYGADFIQDQHKLLNKLSVLTHCNTGSLATAGYGTALGVIRSLHAEGVLERAYCTETRPFNQGSRLTAYELVHEKIPATLVADSAAAALMQLGCVNAVIVGADRVAANGDTANKIGTYNLALSAMYHKVPFYVAAPLTSVDLSLSSGQEIVIEERSPKELLHSRGGLGEQVAASGISVWNPAFDVTPASLISGIITEKGVITKESGDGFDIKGFVNRGGGRAA | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 44244658 | 44247863 | + | Bda034145 | Bda09g01261 | 13511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01261 | 381 | PANTHER | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE | 15 | 373 | - | - | |
Bda09g01261 | 381 | TIGRFAM | salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase | 18 | 361 | IPR005251 | - | |
Bda09g01261 | 381 | Gene3D | - | 172 | 368 | IPR042529 | - | |
Bda09g01261 | 381 | PANTHER | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE | 15 | 373 | - | - | |
Bda09g01261 | 381 | Hamap | Putative methylthioribose-1-phosphate isomerase [mtnA]. | 17 | 370 | IPR005251 | - | |
Bda09g01261 | 381 | Pfam | Initiation factor 2 subunit family | 59 | 360 | IPR000649 | GO:0044237 | |
Bda09g01261 | 381 | Gene3D | - | 15 | 171 | IPR027363 | - | |
Bda09g01261 | 381 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 15 | 362 | IPR037171 | - | |
Bda09g01261 | 381 | TIGRFAM | eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins | 47 | 361 | IPR011559 | GO:0044249 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01060 | Bda-Chr9:40812964 | Bda09g01261 | Bda-Chr9:44244658 | 0 | dispersed | |
Bda09g01261 | Bda-Chr9:44244658 | Bda11g00117 | Bda-Chr11:1614800 | 2.30E-09 | dispersed | |
Bda09g01261 | Bda-Chr9:44244658 | Bda01g01886 | Bda-Chr1:55032435 | 2.79E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01261 | K08963 | - | csv:101210526 | 569.311 |