Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01276 | ATGAACGATCTGTTCTCTAACTCTTTCAAAAAATACGCCGACCTGAAGCAGCAGGCGTACGAAGACGGAATGGAGGCAGGAAACGAGACTGTAGATCTCGACAAATTCTTTGAAGACGTTGAGAATGTGAAGGAAGACATGAAACAGGTGGAAAAGCTCTACAAGAGACTGCAAGAAGCAAATGAAGAAAGCAAAGTAGTTCACAACGCCAAAACCATGAAAGAATTGAGAGCAAGAATGGATCAAGATGTCAGCCAGGTCTTAAGAAGAGTCAAAGTGATCAAAGGAAAGCTCGAAGCTCTCGATCGATCGAACGCATCTCATCGGAGCCTTCCCGGGTGCGGTCCCGGCTCGTCTGCCGATAGAACAAGAACCTCAGTGGTGAGTGGATTGGGGAAGAAACTTAAAGACACCATGGATGATTTTCAGAGCTTAAGAGCTAGAATGAATGCCGAATACAAGGAAACAGTAGAACGCAGGTATTTCACAATCACAGGAGAGAAGGCAAATGAAGAAACAATTGAGACTCTGATATCTAGCGGAGAAAGCGAAAATTTTCTGCAGAAAGCGATTCAAGAACAGGGTAGAGGCCAAATAATGGACACAATATCAGAAATACAAGAGAGGCACGATGCAGTGAAGGAGATAGAGAAGAACCTGATTGAGCTGCACCAGATATTTCTGGACATGGCTGCGCTTGTGGAGGCGCAGGGGCATCAGCTTAACGACATAGAGAGTCACGTTGCACATGCTAATTCGTTTGTCCGGCGAGGCACTCAGCAACTGCAGGAGGCCAAAGAACAGCAGAAAAGCTCGAGGAAATGGACGTGCATTGCTGTAATTCTCGGCGCCGTTCTCGTTGCCGTTCTGCTCTTCCCGCTTTTGACGTCGATTTTGCCCCACTTGATGTAG | 912 | 46.6 | MNDLFSNSFKKYADLKQQAYEDGMEAGNETVDLDKFFEDVENVKEDMKQVEKLYKRLQEANEESKVVHNAKTMKELRARMDQDVSQVLRRVKVIKGKLEALDRSNASHRSLPGCGPGSSADRTRTSVVSGLGKKLKDTMDDFQSLRARMNAEYKETVERRYFTITGEKANEETIETLISSGESENFLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTQQLQEAKEQQKSSRKWTCIAVILGAVLVAVLLFPLLTSILPHLM | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 44512231 | 44513142 | - | Bda032344.1 | Bda09g01276 | 13526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01276 | 303 | CDD | SNARE_syntaxin1-like | 202 | 264 | - | - | |
Bda09g01276 | 303 | Pfam | Syntaxin | 35 | 238 | IPR006011 | GO:0016020 | |
Bda09g01276 | 303 | PANTHER | T-SNARE-RELATED | 10 | 295 | - | - | |
Bda09g01276 | 303 | CDD | SynN | 33 | 190 | IPR006011 | GO:0016020 | |
Bda09g01276 | 303 | Pfam | SNARE domain | 240 | 291 | IPR000727 | - | |
Bda09g01276 | 303 | Coils | Coil | 33 | 67 | - | - | |
Bda09g01276 | 303 | Gene3D | - | 33 | 160 | - | - | |
Bda09g01276 | 303 | MobiDBLite | consensus disorder prediction | 106 | 127 | - | - | |
Bda09g01276 | 303 | PANTHER | SYNTAXIN | 10 | 295 | IPR045242 | - | |
Bda09g01276 | 303 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 203 | 265 | IPR000727 | - | |
Bda09g01276 | 303 | ProSitePatterns | Syntaxin / epimorphin family signature. | 209 | 248 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bda09g01276 | 303 | Gene3D | - | 192 | 295 | - | - | |
Bda09g01276 | 303 | SUPERFAMILY | t-snare proteins | 31 | 258 | IPR010989 | GO:0016020|GO:0016192 | |
Bda09g01276 | 303 | SMART | tSNARE_6 | 198 | 265 | IPR000727 | - | |
Bda09g01276 | 303 | SMART | SynN_4 | 28 | 154 | IPR006011 | GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00422 | Bda-Chr1:30755288 | Bda09g01276 | Bda-Chr9:44512231 | 7.28E-117 | dispersed | |
Bda03g00658 | Bda-Chr3:5593717 | Bda09g01276 | Bda-Chr9:44512231 | 1.38E-123 | dispersed | |
Bda05g01127 | Bda-Chr5:59493476 | Bda09g01276 | Bda-Chr9:44512231 | 7.02E-123 | dispersed | |
Bda09g01276 | Bda-Chr9:44512231 | Bda11g01860 | Bda-Chr11:53717274 | 1.17E-65 | dispersed | |
Bda14g01003 | Bda-Chr14:8450716 | Bda09g01276 | Bda-Chr9:44512231 | 8.26E-64 | dispersed | |
Bda06g00358 | Bda-Chr6:5725017 | Bda09g01276 | Bda-Chr9:44512231 | 1.61E-87 | transposed | |
Bda02g00552 | Bda-Chr2:46377171 | Bda09g01276 | Bda-Chr9:44512231 | 6.98E-95 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01276 | K08486 | - | csv:101217140 | 520.776 |