Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01286 | ATGGCGATTCAGGTGCCGCATGACTTCAAGTGTCCGATTTCGCTGGAGACAATGACTGACCCGGTTATACTTTCATCGGGTCATACCTTTGATCGGGCCTCTATCCAACGGTGGCTCGACGATGGCCACCGGAATTGTCCTATCACTCTTCTTCCCCTCCCTCAATGTCCTACGCTCATCCCCAACCACGCTCTCAGAAGCTTAATTTCAAACTATACTACCCTTTCGCTTCCCAAACAGCCATCTCGTCCCGAGCCCCAATCCCTAATCTCCGCCCTAACTGCCCCGTCTTCTTCGGTGCAAGCCAAACTCGATTCGCTGAACCAACTAGCACGGTTGTCGAAGCGCGACTCTGTGTTTCGTAGAAAGTTGATGGAGTCGGGTGTCGTCTCGCCGGTTCTTAAATGTGCTGGCTCCTGCGATGTAGGTCTACAAGAGAAAGCGCTCGCGTTATTCCTGAATCTTAGTTTAGACGACGATAACAAAGTGGGTTTGGTTGCAGAAGGTGCAATTGGGTTTATCGTCGCTGCTCTACGCGGTGGCTCGTCGGATTGCCGAGCTGTAGCAGCGACGATTCTGACAAGCTTGGCAGTCGTGGAGGTCAATAAGGTCACAATTGGAGAATACCCACATGCAGTTCGAGCTTTGGTATCGCTTCTACGTGAAGGTAGAGGCCGGGAGAAGAAAGAAGCGGCGACGGCACTTTATGCCATCTGTTCATTCCCGGAGAATCGGCTGCGAGCGGTGGGATGTGGTGCTGTCCCGATTCTGATTCGAATTGCGGATTTTGGTCTTGAAAGGGCTATCGAAGTTTTGAGCCATTTAGCAAAATGCAAGGAAGGTCGAGAAGAGATGCAGAGATTGGAGGGATGCTTGAAAATCTTCGTGCGGGTGTTGAGAAATGGAAGTTCAAGAGGAGTTCAATATGCTCTTCTAACTTTAAGCTCTATCTGTTGTCATTGCGATGGAATGTGTTTAGAAGCTAGGAGAGAAGGAGCTTTGGATATGGCCATGGCTTTGGTTGACGATGACAACGACAAAATCAGGAGAAATGCTTCAAATTTAATCCGGGTTTTGCAAGAGAGCCATTTTACGAGGTAA | 1101 | 49.41 | MAIQVPHDFKCPISLETMTDPVILSSGHTFDRASIQRWLDDGHRNCPITLLPLPQCPTLIPNHALRSLISNYTTLSLPKQPSRPEPQSLISALTAPSSSVQAKLDSLNQLARLSKRDSVFRRKLMESGVVSPVLKCAGSCDVGLQEKALALFLNLSLDDDNKVGLVAEGAIGFIVAALRGGSSDCRAVAATILTSLAVVEVNKVTIGEYPHAVRALVSLLREGRGREKKEAATALYAICSFPENRLRAVGCGAVPILIRIADFGLERAIEVLSHLAKCKEGREEMQRLEGCLKIFVRVLRNGSSRGVQYALLTLSSICCHCDGMCLEARREGALDMAMALVDDDNDKIRRNASNLIRVLQESHFTR | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 44634210 | 44635310 | + | Bda032355.1 | Bda09g01286 | 13536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01286 | 366 | Gene3D | - | 86 | 264 | IPR011989 | - | |
Bda09g01286 | 366 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 8 | 1 | 360 | - | - | |
Bda09g01286 | 366 | ProSiteProfiles | U-box domain profile. | 4 | 79 | IPR003613 | GO:0004842|GO:0016567 | |
Bda09g01286 | 366 | SUPERFAMILY | ARM repeat | 88 | 359 | IPR016024 | - | |
Bda09g01286 | 366 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 76 | IPR013083 | - | |
Bda09g01286 | 366 | Gene3D | - | 265 | 363 | IPR011989 | - | |
Bda09g01286 | 366 | PANTHER | U BOX DOMAIN-CONTAINING | 1 | 360 | - | - | |
Bda09g01286 | 366 | Pfam | U-box domain | 5 | 73 | IPR003613 | GO:0004842|GO:0016567 | |
Bda09g01286 | 366 | SUPERFAMILY | RING/U-box | 3 | 73 | - | - | |
Bda09g01286 | 366 | CDD | RING-Ubox_PUB | 9 | 49 | IPR045210 | - | |
Bda09g01286 | 366 | SMART | arm_5 | 158 | 198 | IPR000225 | GO:0005515 | |
Bda09g01286 | 366 | SMART | arm_5 | 278 | 319 | IPR000225 | GO:0005515 | |
Bda09g01286 | 366 | SMART | arm_5 | 321 | 361 | IPR000225 | GO:0005515 | |
Bda09g01286 | 366 | SMART | arm_5 | 117 | 157 | IPR000225 | GO:0005515 | |
Bda09g01286 | 366 | SMART | Ubox_2 | 8 | 72 | IPR003613 | GO:0004842|GO:0016567 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01749 | Bda-Chr1:53663078 | Bda09g01286 | Bda-Chr9:44634210 | 1.15E-174 | dispersed | |
Bda09g01286 | Bda-Chr9:44634210 | Bda14g00363 | Bda-Chr14:2631344 | 3.25E-55 | dispersed | |
Bda09g01286 | Bda-Chr9:44634210 | Bda07g00590 | Bda-Chr7:7230889 | 3.78E-55 | transposed | |
Bda09g01286 | Bda-Chr9:44634210 | Bda02g00818 | Bda-Chr2:48770320 | 1.76E-55 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01286 | - | - | zju:107421885 | 533.872 |