Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01304 ATGGATCTCTTACAGTCTCAAAGGACGGAGATGATAGGCATAGCCATAGCTCTTGCTGCCGTTGGTCTTGGCACCGCCTATTATTTCTATATCACCAAGAAACCCAAAGATTGTTTGGACCCTAATGATTTCAAGGAATTTAAGCTTGTCAAGCGCACCCAACTCAGCCACAATGTGGCTAGTTTCAGATTTGCTCTTCCTACCCCAAACTCAGTCTTGGGCCTTCCGATTGGACAACATATGAGTTGCAGAGGAAAAGATTGTCTTGGCGAAGATGTTTGCAAACCATACACTCCAACGACTTTGGATTCAGATACTGGATACTTTGATTTTGTTATAAAGATGTATCCGCAAGGAAGGATGTCCCACCACTTTCGGGAGATGCGCGAAGGAGATTATTTGGCTGTAAAGGGGCCTAAGGGTCGATTCAAGTATCAGCCGAACCAAGTTAGAGCTTTTGGCATGCTTGCCGGTGGCTCTGGGATCACTCCCATGTTCCAGGTACACAAAGTTGAACTAGTCATTTTGCAGAGTCTTATGACTGCTTCTTGTGGTAACTTTGTAACTCTGCAGGTGGCCAGAGGAATCCTGGAAAATCCAGTTGACAAGACGATTGTGCATCTTATATATGCTAATGTCAAGTATGAAGACATTCTTCTTAAAAAAGAATTAGACCACCTCGTTAGTAGTTGTCCGGGCCGGATCACTGTGTATTACGTTCTGAATGAGCCTCCTCAAGAGTGGGACGGTGGCGTTGGGTTCATATCCAAGGAAATGATTCAAACATTTTGTCCTGCTCCCTCTCCTGATATTAAGGTCATCTCTCTCGCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTAAGTGCTTTCTTTATGTCCTGCAGATACTGCGGTGTGGGCCACCTCCGATGAACAAGGCCATGGCTGCCCACCTTCAAGAACTGGGATACAGCTCCCAAATGCAGTTCCAGTTTTAA 978 45.4 MDLLQSQRTEMIGIAIALAAVGLGTAYYFYITKKPKDCLDPNDFKEFKLVKRTQLSHNVASFRFALPTPNSVLGLPIGQHMSCRGKDCLGEDVCKPYTPTTLDSDTGYFDFVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRAFGMLAGGSGITPMFQVHKVELVILQSLMTASCGNFVTLQVARGILENPVDKTIVHLIYANVKYEDILLKKELDHLVSSCPGRITVYYVLNEPPQEWDGGVGFISKEMIQTFCPAPSPDIKVISLALSLSLFLSLSKCFLYVLQILRCGPPPMNKAMAAHLQELGYSSQMQFQF 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44872317 44875186 - Bda032374.1 Bda09g01304 13554

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01304 325 Pfam Oxidoreductase NAD-binding domain 155 308 IPR001433 GO:0016491
Bda09g01304 325 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Bda09g01304 325 PRINTS Cytochrome B5 reductase signature 131 145 - -
Bda09g01304 325 PRINTS Cytochrome B5 reductase signature 95 102 - -
Bda09g01304 325 PRINTS Cytochrome B5 reductase signature 154 173 - -
Bda09g01304 325 PRINTS Cytochrome B5 reductase signature 73 84 - -
Bda09g01304 325 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 274 IPR001834 GO:0016491
Bda09g01304 325 CDD cyt_b5_reduct_like 47 325 - -
Bda09g01304 325 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 322 IPR039261 -
Bda09g01304 325 Gene3D - 137 323 IPR039261 -
Bda09g01304 325 Gene3D Translation factors 35 136 - -
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 IPR001834 GO:0016491
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 294 325 IPR001834 GO:0016491
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 294 325 - -
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 274 - -
Bda09g01304 325 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 - -
Bda09g01304 325 SUPERFAMILY Riboflavin synthase domain-like 36 148 IPR017938 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01304 K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] - rcu:8289547 444.121
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01493 Bda-Chr3:53238692 Bda09g01304 Bda-Chr9:44872317 4.98E-128 dispersed
Bda09g01304 Bda-Chr9:44872317 Bda11g00134 Bda-Chr11:1834176 5.48E-44 dispersed
Bda09g01304 Bda-Chr9:44872317 Bda05g00993 Bda-Chr5:58358234 8.04E-147 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda09g01304 Bda_Chr09 FPKM 5.152408 6.090024 5.745726 5.531655 8.391531 8.510004 9.900545 3.809649 4.597112