Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01316 | ATGGCAGCTTCTCTCTCTTCTGTCGTGCTGGTCGTTGTACTAATGCATTTTCTAGCAACAACCCTCGTTTCATCTTCCCCAGTTCAAGACCCTGAATTAGTCGTGGATGAAGTTCTTACGAGCATCAACAACGCCTCCATTAGCAGAAGAAATCTAGCTTCGTGTAGTACAGGCAACCCCATTGACGACTGTTGGAGGTGCGACTCCAATTGGGAGACTAACCGGAAGCGTCTCGCTGATTGTGCCATCGGCTTCGGCAAGGGGGCGATCGGCGGGAGAGATGGAAAGATTTACGTCGTCACTGATCCAACCGACGAAGACCTCGTAAACCCTAAACCAGGCACTCTCCGTTACGCGGTCATACAAGACGAGCCCCTCTGGATCATCTTCAGTCGAGATATGGTCATCAAGCTAAAAGCGGAGCTCATCATGAACTCCTTCAAGACCATCGACGGCCGCGGAGCCAACGTCCACATCGCCGGCGGACCTTGCATTACGATTCAGTACGTGACGAACATCATAATTCACGGAATCAGCATTCACGATTGCAAGGTCGGAGGGAACACCTACGTGAGAGACTCGCCGGATCATTACGGCTGGCGAACGTTGTCAGATGGAGATGGGATTTCGATCTTCGGAGGAAGCTATGTTTGGGTGGACCATTGCTCTCTGTCTAACTGCAACGACGGTCTGATAGACGCCATTCATGGATCGACCGCCATAACCATATCTAACAATTACATGACCCATCACAACAAAGTCATGCTCTTAGGCCACAGCGATTCCTACCAACAAGACAAGAACATGCAAGTCACCATAGCTTTCAACCATTTCGGAGAAGGATTAATCCAGAGAATGCCAAGATGCAGACTTGGGTATTTCCACGTCGTGAATAATGACTACACTCATTGGGTCATGTACGCCATTGGCGGTAGCGCAGCTCCGACGATCAACAGCCAAGGCAACAGATTTCTAGCCCCAGACGACGCTGCCCACAAAGAGGTAACGAAGCACGAGAACACAGCGGAGAGAGTATGGACAAACTGGAACTGGAGATCGCAGGGAGATTTGATGTTAAACGGTGCGTTTTTCACTAGATCTGGATCGGCAGGGTCCTCCAGCTACGCCAAGGCGTCGAGCGTGAGCGCAAGACCGGTGTCGCTAGTGAGCTCACTCACCGCCGGCGCCGGCGCTCTTAGATGCAAAAAGGGTTCTCTTTGCTGA | 1224 | 51.31 | MAASLSSVVLVVVLMHFLATTLVSSSPVQDPELVVDEVLTSINNASISRRNLASCSTGNPIDDCWRCDSNWETNRKRLADCAIGFGKGAIGGRDGKIYVVTDPTDEDLVNPKPGTLRYAVIQDEPLWIIFSRDMVIKLKAELIMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGISIHDCKVGGNTYVRDSPDHYGWRTLSDGDGISIFGGSYVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSYQQDKNMQVTIAFNHFGEGLIQRMPRCRLGYFHVVNNDYTHWVMYAIGGSAAPTINSQGNRFLAPDDAAHKEVTKHENTAERVWTNWNWRSQGDLMLNGAFFTRSGSAGSSSYAKASSVSARPVSLVSSLTAGAGALRCKKGSLC | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 44937624 | 44939115 | + | Bda032387.1 | Bda09g01316 | 13566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01316 | 407 | Gene3D | - | 58 | 400 | IPR012334 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 205 | 226 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 105 | 130 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 285 | 304 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 378 | 401 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 81 | 98 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 141 | 157 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 349 | 373 | IPR018082 | - | |
Bda09g01316 | 407 | PRINTS | Pollen allergen Amb family signature | 307 | 326 | IPR018082 | - | |
Bda09g01316 | 407 | PANTHER | PECTATE LYASE 18-RELATED | 12 | 404 | IPR045032 | GO:0030570 | |
Bda09g01316 | 407 | SUPERFAMILY | Pectin lyase-like | 43 | 401 | IPR011050 | - | |
Bda09g01316 | 407 | SMART | amb_all | 133 | 330 | IPR002022 | - | |
Bda09g01316 | 407 | Pfam | Pectate lyase | 141 | 324 | IPR002022 | - | |
Bda09g01316 | 407 | PANTHER | PECTATE LYASE | 12 | 404 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01316 | Bda-Chr9:44937624 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
Bda13g01679 | Bda-Chr13:40172820 | Bda09g01316 | Bda-Chr9:44937624 | 2.49E-165 | dispersed | |
Bda14g00368 | Bda-Chr14:2672466 | Bda09g01316 | Bda-Chr9:44937624 | 4.55E-137 | dispersed | |
Bda02g00603 | Bda-Chr2:46877864 | Bda09g01316 | Bda-Chr9:44937624 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01316 | K01728 | - | zju:107428464 | 669.463 |