Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01331 ATGTGGTCTGCTGCCCCTAGACAAATCAATTACGGCATTTCACCGGAGATGGGCATGGTGGGTCTACGCGATGTCTTTGTTGTAGCACCCGCCTCCTCTTTCAACCCTAATAATCATATTCATCATCCGCATGAAACCATCAATGCCGATCATCACTCCTTTAACAGCTCAAACCCAGCGACGGCCCTCGGAGTCGGCGTCGGCGTTATTCCTCTCCTCAGTGCGGCTCACCTGGCTCCGCATGGCCTTGTCGGTGAAGATCAAGAGGGTTTGGTGGGTAGAAGCCGAGGTGGTGGAGTTCAGCTATGGCAAAATCCGCAGTTAAACCATGGTCACTACCTGAAGAAACAAGCTCCTTTCGATCATAATAACAATTCTGCAAATTTAGTCCTTAGTGGAGGTGGTAACTTTGGAGGAGCTTCTGTGTCTGAGTCTGCTCCTTCATCATCGACCTTGACTTGCCAAGACTGTGGAAATCAAGCGAAGAAAGATTGTAGCCATAGGCGTTGCAGAACTTGCTGCAGAAGTCGAGGTTTCGATTGTTCAACTCATGTTAGAAGTACTTGGGTGCCAGCTGCTCGCCGGAGAGAGCGGCAATCAATGACGGTCGGTGCTTCTCCTGCCGCAGGATCTTCTGCATCGACCTCCGGCGCCAAGAAACCCAGACTCATAACTTCACAAACAACAACCACCTCTCATACTTCTACTTCTAACACCACTCCTGGAAGCTTTGACACAAGCTCTAGCCAGCAAGATGTAAGTTTTAAGGAGTCATTTCCTGGTCAAGTTCGAGCGCCGGCAGTTTTCAAATGCGTTAGAGTGACGGCAGTGGAAGATGGAGAAGACGAGTACGCTTACCAAGCAGTCGTCAAAATCGGCGGCCATGTTTTCAAAGGTTTTTTGTACGATCAAGGTGTAGAATCAAGAGATGGGTTTCCAAACATGTCTGAACTGCATTTAACCAATAGAAGTGCCGGAGATGTCATAGAATCCGGCGAAGGCGGAGGAGGAAGAAATAGAACCTCATCTCCAGTTCTTAATCACCCCTTGGATGTTTTTGCGGCCTCCGGCGGCGGAGGATTGCTTGGAGGTTCTAGCTATGGTAACTCTATGAACTCATAA 1122 49.02 MWSAAPRQINYGISPEMGMVGLRDVFVVAPASSFNPNNHIHHPHETINADHHSFNSSNPATALGVGVGVIPLLSAAHLAPHGLVGEDQEGLVGRSRGGGVQLWQNPQLNHGHYLKKQAPFDHNNNSANLVLSGGGNFGGASVSESAPSSSTLTCQDCGNQAKKDCSHRRCRTCCRSRGFDCSTHVRSTWVPAARRRERQSMTVGASPAAGSSASTSGAKKPRLITSQTTTTSHTSTSNTTPGSFDTSSSQQDVSFKESFPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVESRDGFPNMSELHLTNRSAGDVIESGEGGGGRNRTSSPVLNHPLDVFAASGGGGLLGGSSYGNSMNS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45050922 45052153 - Bda032401.1 Bda09g01331 13581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01331 373 MobiDBLite consensus disorder prediction 204 255 - -
Bda09g01331 373 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 372 - -
Bda09g01331 373 MobiDBLite consensus disorder prediction 192 255 - -
Bda09g01331 373 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 372 IPR007818 GO:0003700|GO:0006355
Bda09g01331 373 Pfam Domain of unknown function (DUF702) 151 307 - -
Bda09g01331 373 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 153 195 IPR006510 -
Bda09g01331 373 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 259 306 IPR006511 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00763 Bda09g01331 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01331 Bda-Chr9:45050922 Bda10g00166 Bda-Chr10:4910528 6.75E-48 dispersed
Bda11g00432 Bda-Chr11:4590759 Bda09g01331 Bda-Chr9:45050922 1.78E-09 transposed
Bda07g00763 Bda-Chr7:9051685 Bda09g01331 Bda-Chr9:45050922 2.05E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16439 PF05142 DUF702 7.50E-62 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01331 - - vri:117916582 426.402