Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01385 | ATGATCCAACTTTCCGATGAATCAAAGTATTATTCGCTTAATGCAAGAAAACCCACTAACCCTACTACTTCCCCCACTTCGCCAATCTTTCCCGACCAGAGGAGTCCCATCTTCACCCTAGAGATTTTAGTACACACTCTCTCTCTACCTTCTGTTTCTCTCTCTACCTCTCTTTGTCTCTGGCTTTCTAGTTTCTTACCCATTTCTTATGAGTTTTTGATCGACGGTATTTTGGTTTTGTTTGAAACAATTCTTCCTGATCTGTTTCTACACACACCTTCTGCGAATTTCCAGTCACTAAGAAAAATGTCTCTGGACTTGATGGCCTCCGAACGTGTTTGTTATGTCCACTGCAACTTCTGCAACACTGTTTTGGCGGTAATCGTTCCATACAGTAACTTGTCTACGATTAGGACAGTAAGATGTGGACATTGCGCCAATTTGCTGTCAGTGAATATGGGAACTTCCCTTCAAGTATTTCCCCCACAAAATTCACAGCAGCTAAGCCCTGGGGGTTCTAGTACAGACAGTGGAGGTTCATCTTCAACAACCATCAATTTAGCTGCCTTTGAGTCTCTAGATCATGAACCACCTAGACTGGCTCCAATTCGCCCACCAGAGAAAAGACAGCGCGTCCCTTCTGCTTATAACAGGTTCATTAAAGAGGAAATCCAAAGGATTAAAGCTGGTAATCCAGAAATAAGCCACAGGGAAGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTTCCTCATATTCATTTCGGGTTGAAGACGATGGACGGGAACAAGCAAGCAAAGTCGGATCATTCATTTGCAGGAGAAGGGATAAACAAGAAGGCAAAGTCTAATGCATTCTGCAAAGCTGTGTAG | 873 | 43.07 | MIQLSDESKYYSLNARKPTNPTTSPTSPIFPDQRSPIFTLEILVHTLSLPSVSLSTSLCLWLSSFLPISYEFLIDGILVLFETILPDLFLHTPSANFQSLRKMSLDLMASERVCYVHCNFCNTVLAVIVPYSNLSTIRTVRCGHCANLLSVNMGTSLQVFPPQNSQQLSPGGSSTDSGGSSSTTINLAAFESLDHEPPRLAPIRPPEKRQRVPSAYNRFIKEEIQRIKAGNPEISHREAFSTAAKNWAHFPHIHFGLKTMDGNKQAKSDHSFAGEGINKKAKSNAFCKAV | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45711455 | 45716217 | + | Bda032467.1 | Bda09g01385 | 13635 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01385 | 290 | Gene3D | High mobility group box domain | 202 | 268 | IPR036910 | - | |
Bda09g01385 | 290 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Bda09g01385 | 290 | PANTHER | PROTEIN YABBY 6-RELATED | 108 | 279 | IPR006780 | GO:0007275 | |
Bda09g01385 | 290 | Pfam | YABBY protein | 109 | 257 | IPR006780 | GO:0007275 | |
Bda09g01385 | 290 | PANTHER | AXIAL REGULATOR YABBY 2-RELATED | 108 | 279 | - | - | |
Bda09g01385 | 290 | SUPERFAMILY | HMG-box | 202 | 250 | IPR036910 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00059 | Bda-Chr8:474375 | Bda09g01385 | Bda-Chr9:45711455 | 6.37E-30 | dispersed | |
Bda08g00564 | Bda-Chr8:5726069 | Bda09g01385 | Bda-Chr9:45711455 | 2.34E-49 | dispersed | |
Bda09g01385 | Bda-Chr9:45711455 | Bda11g00056 | Bda-Chr11:675973 | 6.67E-48 | dispersed | |
Bda02g00672 | Bda-Chr2:47697065 | Bda09g01385 | Bda-Chr9:45711455 | 6.44E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16447 | PF04690 | YABBY | 2.20E-64 | CL0114 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01385 | K25796 | - | zju:107410267 | 263.077 |