Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01385 ATGATCCAACTTTCCGATGAATCAAAGTATTATTCGCTTAATGCAAGAAAACCCACTAACCCTACTACTTCCCCCACTTCGCCAATCTTTCCCGACCAGAGGAGTCCCATCTTCACCCTAGAGATTTTAGTACACACTCTCTCTCTACCTTCTGTTTCTCTCTCTACCTCTCTTTGTCTCTGGCTTTCTAGTTTCTTACCCATTTCTTATGAGTTTTTGATCGACGGTATTTTGGTTTTGTTTGAAACAATTCTTCCTGATCTGTTTCTACACACACCTTCTGCGAATTTCCAGTCACTAAGAAAAATGTCTCTGGACTTGATGGCCTCCGAACGTGTTTGTTATGTCCACTGCAACTTCTGCAACACTGTTTTGGCGGTAATCGTTCCATACAGTAACTTGTCTACGATTAGGACAGTAAGATGTGGACATTGCGCCAATTTGCTGTCAGTGAATATGGGAACTTCCCTTCAAGTATTTCCCCCACAAAATTCACAGCAGCTAAGCCCTGGGGGTTCTAGTACAGACAGTGGAGGTTCATCTTCAACAACCATCAATTTAGCTGCCTTTGAGTCTCTAGATCATGAACCACCTAGACTGGCTCCAATTCGCCCACCAGAGAAAAGACAGCGCGTCCCTTCTGCTTATAACAGGTTCATTAAAGAGGAAATCCAAAGGATTAAAGCTGGTAATCCAGAAATAAGCCACAGGGAAGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTTCCTCATATTCATTTCGGGTTGAAGACGATGGACGGGAACAAGCAAGCAAAGTCGGATCATTCATTTGCAGGAGAAGGGATAAACAAGAAGGCAAAGTCTAATGCATTCTGCAAAGCTGTGTAG 873 43.07 MIQLSDESKYYSLNARKPTNPTTSPTSPIFPDQRSPIFTLEILVHTLSLPSVSLSTSLCLWLSSFLPISYEFLIDGILVLFETILPDLFLHTPSANFQSLRKMSLDLMASERVCYVHCNFCNTVLAVIVPYSNLSTIRTVRCGHCANLLSVNMGTSLQVFPPQNSQQLSPGGSSTDSGGSSSTTINLAAFESLDHEPPRLAPIRPPEKRQRVPSAYNRFIKEEIQRIKAGNPEISHREAFSTAAKNWAHFPHIHFGLKTMDGNKQAKSDHSFAGEGINKKAKSNAFCKAV 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45711455 45716217 + Bda032467.1 Bda09g01385 13635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01385 290 Gene3D High mobility group box domain 202 268 IPR036910 -
Bda09g01385 290 MobiDBLite consensus disorder prediction 162 181 - -
Bda09g01385 290 PANTHER PROTEIN YABBY 6-RELATED 108 279 IPR006780 GO:0007275
Bda09g01385 290 Pfam YABBY protein 109 257 IPR006780 GO:0007275
Bda09g01385 290 PANTHER AXIAL REGULATOR YABBY 2-RELATED 108 279 - -
Bda09g01385 290 SUPERFAMILY HMG-box 202 250 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00059 Bda-Chr8:474375 Bda09g01385 Bda-Chr9:45711455 6.37E-30 dispersed
Bda08g00564 Bda-Chr8:5726069 Bda09g01385 Bda-Chr9:45711455 2.34E-49 dispersed
Bda09g01385 Bda-Chr9:45711455 Bda11g00056 Bda-Chr11:675973 6.67E-48 dispersed
Bda02g00672 Bda-Chr2:47697065 Bda09g01385 Bda-Chr9:45711455 6.44E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16447 PF04690 YABBY 2.20E-64 CL0114 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01385 K25796 - zju:107410267 263.077