Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01389 | ATGGAAGAAGCAGCCATTGAAGTTCCTTCTCATTTTCTCTGCCCTATTTCTCTGCAAATGATGAGAGATCCACGAATCAAAGCAGTGGAAGAAGGAGCAGTAATGACGCTCATCGAACTTCTTCTAAACTCATCAGACACGAGAATTTGCGAGCTTTCGCTCATAGTTCTTGACCAGCTCTGCGGCTGCGCAGAGGGAAGAGCTCAGTTGATGGATCACGCAGGTGGGTTTGCCGTAATCTCAAAGAAAATACTTAGGGTTTCGAGAGTGGCAACTGATAGAGGAGTTAAAATATTTTCCTCCATTTGTAAGTTTTCTGCAACTTCTAGGGTTCTTCAGGAGATGATGGAGGTCGGTGTGGCGACGAAGTTGTGTTTGGTGGTGCAAATGGAGGTGAGTTTCAAGACAAAAGAGAGGGCTCGAGAAACCCTAAAATTACACTCTAGGGTTTGGAAAAATTCCCCCTGTATCCCTCCCCATTTATTGTCTTCTTACCCTTCTTAA | 504 | 44.64 | MEEAAIEVPSHFLCPISLQMMRDPRIKAVEEGAVMTLIELLLNSSDTRICELSLIVLDQLCGCAEGRAQLMDHAGGFAVISKKILRVSRVATDRGVKIFSSICKFSATSRVLQEMMEVGVATKLCLVVQMEVSFKTKERARETLKLHSRVWKNSPCIPPHLLSSYPS | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45801807 | 45803014 | + | Bda032473.1 | Bda09g01389 | 13639 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01389 | 167 | PANTHER | OS11G0573500 PROTEIN | 25 | 166 | - | - | |
Bda09g01389 | 167 | PANTHER | OS11G0573500 PROTEIN | 2 | 24 | - | - | |
Bda09g01389 | 167 | SUPERFAMILY | RING/U-box | 3 | 26 | - | - | |
Bda09g01389 | 167 | SUPERFAMILY | ARM repeat | 23 | 144 | IPR016024 | - | |
Bda09g01389 | 167 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 48 | IPR013083 | - | |
Bda09g01389 | 167 | PANTHER | WDSAM1 PROTEIN | 25 | 166 | IPR045185 | GO:0061630 | |
Bda09g01389 | 167 | PANTHER | WDSAM1 PROTEIN | 2 | 24 | IPR045185 | GO:0061630 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01389 | Bda-Chr9:45801807 | Bda15g00567 | Bda-Chr15:8833776 | 5.00E-08 | dispersed | |
Bda09g01389 | Bda-Chr9:45801807 | Bda09g01390 | Bda-Chr9:45807203 | 4.89E-40 | tandem | |
Bda02g00678 | Bda-Chr2:47760594 | Bda09g01389 | Bda-Chr9:45801807 | 2.86E-09 | wgd | |
Bda03g01627 | Bda-Chr3:55631798 | Bda09g01389 | Bda-Chr9:45801807 | 4.42E-54 | wgd | |
Bda09g00271 | Bda-Chr9:3361028 | Bda09g01389 | Bda-Chr9:45801807 | 6.22E-40 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01389 | - | - | qsu:112009329 | 207.608 |