Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01389 ATGGAAGAAGCAGCCATTGAAGTTCCTTCTCATTTTCTCTGCCCTATTTCTCTGCAAATGATGAGAGATCCACGAATCAAAGCAGTGGAAGAAGGAGCAGTAATGACGCTCATCGAACTTCTTCTAAACTCATCAGACACGAGAATTTGCGAGCTTTCGCTCATAGTTCTTGACCAGCTCTGCGGCTGCGCAGAGGGAAGAGCTCAGTTGATGGATCACGCAGGTGGGTTTGCCGTAATCTCAAAGAAAATACTTAGGGTTTCGAGAGTGGCAACTGATAGAGGAGTTAAAATATTTTCCTCCATTTGTAAGTTTTCTGCAACTTCTAGGGTTCTTCAGGAGATGATGGAGGTCGGTGTGGCGACGAAGTTGTGTTTGGTGGTGCAAATGGAGGTGAGTTTCAAGACAAAAGAGAGGGCTCGAGAAACCCTAAAATTACACTCTAGGGTTTGGAAAAATTCCCCCTGTATCCCTCCCCATTTATTGTCTTCTTACCCTTCTTAA 504 44.64 MEEAAIEVPSHFLCPISLQMMRDPRIKAVEEGAVMTLIELLLNSSDTRICELSLIVLDQLCGCAEGRAQLMDHAGGFAVISKKILRVSRVATDRGVKIFSSICKFSATSRVLQEMMEVGVATKLCLVVQMEVSFKTKERARETLKLHSRVWKNSPCIPPHLLSSYPS 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45801807 45803014 + Bda032473.1 Bda09g01389 13639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01389 167 PANTHER OS11G0573500 PROTEIN 25 166 - -
Bda09g01389 167 PANTHER OS11G0573500 PROTEIN 2 24 - -
Bda09g01389 167 SUPERFAMILY RING/U-box 3 26 - -
Bda09g01389 167 SUPERFAMILY ARM repeat 23 144 IPR016024 -
Bda09g01389 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 48 IPR013083 -
Bda09g01389 167 PANTHER WDSAM1 PROTEIN 25 166 IPR045185 GO:0061630
Bda09g01389 167 PANTHER WDSAM1 PROTEIN 2 24 IPR045185 GO:0061630
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01389 Bda-Chr9:45801807 Bda15g00567 Bda-Chr15:8833776 5.00E-08 dispersed
Bda09g01389 Bda-Chr9:45801807 Bda09g01390 Bda-Chr9:45807203 4.89E-40 tandem
Bda02g00678 Bda-Chr2:47760594 Bda09g01389 Bda-Chr9:45801807 2.86E-09 wgd
Bda03g01627 Bda-Chr3:55631798 Bda09g01389 Bda-Chr9:45801807 4.42E-54 wgd
Bda09g00271 Bda-Chr9:3361028 Bda09g01389 Bda-Chr9:45801807 6.22E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01389 - - qsu:112009329 207.608