Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01394 | TTAAAGAGAAAAAGTGGTACGCCAGATTTTGAAGCTGAATCTAGTGATAGAGCTACTGGTCCTGGATTCCCTGAAGTATCCGGCAGCTCTCTTCAAACACCTGGATCGGTAAAAGGAGGAAAAGGAAGCAAATCAAGGCTTACAAAGTGCAGTAGATTGGTACCTCAAACTCCTGTTTCGAACGTAGGTTCACCTTCTGGCAATAATCTCGCATCAGCAGGTCCTTGCCGTTATGACAGTTCCCTAGGTCTCTTGACAAAAAAGTTTATCAACCTAATCAAACAAGCAGATGATGGTATCCTTGACCTGAATAAAGCTGCAGACACATTAGAGGTGCAGAAAAGGCGAATATATGATATAACAAACGTACTTGAAGGAATTGGTCTGATAGAAAAGAAGCTGAAAAACAGAATTCAATGGAAGGGGCTTGACGTGTCAAGACCAGGGGATGATGATGGAAATTTTTCTAGCTTACAGGCAGAAGTCGAAAACCTTTCCATTGAGGAGCGTGGATTAGATGAACAAATAAGAGAAATGCAGGAAAGATTAAGAGATCTCAGTGAAAATGACAACAATCAGAGGTGGCTTTTTGTCACTGAAGAAGATATCAAAGGTTTGCCTTGTTTCCAGAATGAAACGTTGATAGCTATTAAGGCTCCACATGGGACTACTTTGGAAGTACCTGATCCTGACGAGGCTGTTGACTATCCCCAAAGGACGTACAGAATAGTCCTAAGAAGCACTATGGGTCCTATAGATGTTTACCTTGTCAGTCAATTTGAAGAGAAGTTTGAGGAGGTTAATGGTGTTGAAGTGCCTCTGACCACAATCTTACCTTCAACTTCCGGGTACAATGAGCCTCCCATGACAACAATGGAAATAGAAGAAAGTAGAGGGAAGAGTATTGAAATGCAAGAAGCCGATGTTCATCAAATGTGCTCCGATCTTAATGCTTCACAGGACTTTGTGGGTGGGATTATGAAGATTGTTCCCTCGGTAGTGGACAGTGACGCTGATTACTGGCTTCTATCAGACGCTGATGTTAGCATTACTGACATGTGGAGAACTGAAACTGGTGTTGAATGGAACGATTTGGGTACACTTCATGAAGATTACCCTATGTCCAGCATTGACGAGATAGCCAATATCAGCTTGCCTCTTCCGCAGGCTTCACCAGCCCCATCTGCGGCAGGTGAATTACCTTCTAGCTCAAACCCTACTGGAAGTTGA | 1230 | 43.01 | LKRKSGTPDFEAESSDRATGPGFPEVSGSSLQTPGSVKGGKGSKSRLTKCSRLVPQTPVSNVGSPSGNNLASAGPCRYDSSLGLLTKKFINLIKQADDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGDDDGNFSSLQAEVENLSIEERGLDEQIREMQERLRDLSENDNNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRTYRIVLRSTMGPIDVYLVSQFEEKFEEVNGVEVPLTTILPSTSGYNEPPMTTMEIEESRGKSIEMQEADVHQMCSDLNASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTETGVEWNDLGTLHEDYPMSSIDEIANISLPLPQASPAPSAAGELPSSSNPTGS | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45834440 | 45837826 | + | Bda032478.1 | Bda09g01394 | 13644 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01394 | 409 | MobiDBLite | consensus disorder prediction | 25 | 39 | - | - | |
Bda09g01394 | 409 | SUPERFAMILY | Winged helix DNA-binding domain | 77 | 140 | IPR036390 | - | |
Bda09g01394 | 409 | Pfam | E2F/DP family winged-helix DNA-binding domain | 79 | 142 | IPR003316 | GO:0005667|GO:0006355 | |
Bda09g01394 | 409 | Pfam | E2F transcription factor CC-MB domain | 158 | 258 | IPR032198 | GO:0046983 | |
Bda09g01394 | 409 | CDD | E2F_DD | 156 | 259 | IPR032198 | GO:0046983 | |
Bda09g01394 | 409 | Gene3D | - | 72 | 144 | IPR036388 | - | |
Bda09g01394 | 409 | PANTHER | TRANSCRIPTION FACTOR E2F | 1 | 392 | IPR015633 | GO:0000978|GO:0006357 | |
Bda09g01394 | 409 | MobiDBLite | consensus disorder prediction | 49 | 71 | - | - | |
Bda09g01394 | 409 | Gene3D | - | 152 | 259 | - | - | |
Bda09g01394 | 409 | MobiDBLite | consensus disorder prediction | 386 | 409 | - | - | |
Bda09g01394 | 409 | Coils | Coil | 155 | 189 | - | - | |
Bda09g01394 | 409 | SUPERFAMILY | E2F-DP heterodimerization region | 155 | 259 | IPR037241 | - | |
Bda09g01394 | 409 | PANTHER | TRANSCRIPTION FACTOR E2FB | 1 | 392 | - | - | |
Bda09g01394 | 409 | SMART | E2F_TDP_2 | 77 | 142 | IPR003316 | GO:0005667|GO:0006355 | |
Bda09g01394 | 409 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00683 | Bda09g01394 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00346 | Bda-Chr1:29132992 | Bda09g01394 | Bda-Chr9:45834440 | 1.78E-17 | dispersed | |
Bda03g00671 | Bda-Chr3:5691855 | Bda09g01394 | Bda-Chr9:45834440 | 1.07E-152 | dispersed | |
Bda09g01394 | Bda-Chr9:45834440 | Bda11g01676 | Bda-Chr11:50911377 | 1.43E-08 | dispersed | |
Bda02g00683 | Bda-Chr2:47790281 | Bda09g01394 | Bda-Chr9:45834440 | 1.08E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16448 | PF16421 | E2F_CC-MB | 1.60E-34 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01394 | K06620 | - | csv:101219318 | 629.787 |