Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01394 TTAAAGAGAAAAAGTGGTACGCCAGATTTTGAAGCTGAATCTAGTGATAGAGCTACTGGTCCTGGATTCCCTGAAGTATCCGGCAGCTCTCTTCAAACACCTGGATCGGTAAAAGGAGGAAAAGGAAGCAAATCAAGGCTTACAAAGTGCAGTAGATTGGTACCTCAAACTCCTGTTTCGAACGTAGGTTCACCTTCTGGCAATAATCTCGCATCAGCAGGTCCTTGCCGTTATGACAGTTCCCTAGGTCTCTTGACAAAAAAGTTTATCAACCTAATCAAACAAGCAGATGATGGTATCCTTGACCTGAATAAAGCTGCAGACACATTAGAGGTGCAGAAAAGGCGAATATATGATATAACAAACGTACTTGAAGGAATTGGTCTGATAGAAAAGAAGCTGAAAAACAGAATTCAATGGAAGGGGCTTGACGTGTCAAGACCAGGGGATGATGATGGAAATTTTTCTAGCTTACAGGCAGAAGTCGAAAACCTTTCCATTGAGGAGCGTGGATTAGATGAACAAATAAGAGAAATGCAGGAAAGATTAAGAGATCTCAGTGAAAATGACAACAATCAGAGGTGGCTTTTTGTCACTGAAGAAGATATCAAAGGTTTGCCTTGTTTCCAGAATGAAACGTTGATAGCTATTAAGGCTCCACATGGGACTACTTTGGAAGTACCTGATCCTGACGAGGCTGTTGACTATCCCCAAAGGACGTACAGAATAGTCCTAAGAAGCACTATGGGTCCTATAGATGTTTACCTTGTCAGTCAATTTGAAGAGAAGTTTGAGGAGGTTAATGGTGTTGAAGTGCCTCTGACCACAATCTTACCTTCAACTTCCGGGTACAATGAGCCTCCCATGACAACAATGGAAATAGAAGAAAGTAGAGGGAAGAGTATTGAAATGCAAGAAGCCGATGTTCATCAAATGTGCTCCGATCTTAATGCTTCACAGGACTTTGTGGGTGGGATTATGAAGATTGTTCCCTCGGTAGTGGACAGTGACGCTGATTACTGGCTTCTATCAGACGCTGATGTTAGCATTACTGACATGTGGAGAACTGAAACTGGTGTTGAATGGAACGATTTGGGTACACTTCATGAAGATTACCCTATGTCCAGCATTGACGAGATAGCCAATATCAGCTTGCCTCTTCCGCAGGCTTCACCAGCCCCATCTGCGGCAGGTGAATTACCTTCTAGCTCAAACCCTACTGGAAGTTGA 1230 43.01 LKRKSGTPDFEAESSDRATGPGFPEVSGSSLQTPGSVKGGKGSKSRLTKCSRLVPQTPVSNVGSPSGNNLASAGPCRYDSSLGLLTKKFINLIKQADDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGDDDGNFSSLQAEVENLSIEERGLDEQIREMQERLRDLSENDNNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRTYRIVLRSTMGPIDVYLVSQFEEKFEEVNGVEVPLTTILPSTSGYNEPPMTTMEIEESRGKSIEMQEADVHQMCSDLNASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTETGVEWNDLGTLHEDYPMSSIDEIANISLPLPQASPAPSAAGELPSSSNPTGS 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45834440 45837826 + Bda032478.1 Bda09g01394 13644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01394 409 MobiDBLite consensus disorder prediction 25 39 - -
Bda09g01394 409 SUPERFAMILY Winged helix DNA-binding domain 77 140 IPR036390 -
Bda09g01394 409 Pfam E2F/DP family winged-helix DNA-binding domain 79 142 IPR003316 GO:0005667|GO:0006355
Bda09g01394 409 Pfam E2F transcription factor CC-MB domain 158 258 IPR032198 GO:0046983
Bda09g01394 409 CDD E2F_DD 156 259 IPR032198 GO:0046983
Bda09g01394 409 Gene3D - 72 144 IPR036388 -
Bda09g01394 409 PANTHER TRANSCRIPTION FACTOR E2F 1 392 IPR015633 GO:0000978|GO:0006357
Bda09g01394 409 MobiDBLite consensus disorder prediction 49 71 - -
Bda09g01394 409 Gene3D - 152 259 - -
Bda09g01394 409 MobiDBLite consensus disorder prediction 386 409 - -
Bda09g01394 409 Coils Coil 155 189 - -
Bda09g01394 409 SUPERFAMILY E2F-DP heterodimerization region 155 259 IPR037241 -
Bda09g01394 409 PANTHER TRANSCRIPTION FACTOR E2FB 1 392 - -
Bda09g01394 409 SMART E2F_TDP_2 77 142 IPR003316 GO:0005667|GO:0006355
Bda09g01394 409 MobiDBLite consensus disorder prediction 1 71 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00683 Bda09g01394 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00346 Bda-Chr1:29132992 Bda09g01394 Bda-Chr9:45834440 1.78E-17 dispersed
Bda03g00671 Bda-Chr3:5691855 Bda09g01394 Bda-Chr9:45834440 1.07E-152 dispersed
Bda09g01394 Bda-Chr9:45834440 Bda11g01676 Bda-Chr11:50911377 1.43E-08 dispersed
Bda02g00683 Bda-Chr2:47790281 Bda09g01394 Bda-Chr9:45834440 1.08E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16448 PF16421 E2F_CC-MB 1.60E-34 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01394 K06620 - csv:101219318 629.787