Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01453 ATGGATTTGACGGGAGTAAGATCTGAACCTCACGTCGCCCAACAAAGGCGCCGGGAAAGGCTAAGAGTTCAGCAAATTAATACATCACAATCTCTTCCGACAGATGATCGCCAATTCTCTTTCCATTCCGAATTAAGGCCAGATCTCGGTCAAGTTGGCAATGCAAGTTCTCTTTTTGACCCATCTTTTCTCCCCTCGGAAATGATCGGGTTTTCGTCGGATTTTAATTCTCTACCCGGCCAAAGTGACTCAATCGGACGTCAGCAAATGTCAGAGAATCCCCTCTTTCGTTCTAGATCGATCTCATCTAATTTGAATTTATCATCTAAAGTTCAACAACAAGCCGGTGATTGGATGTTGACTTATGGAAGTAGTTTATGGTCTGCGGAAAATAATCCCAATCTTATGATTTCCGGCGAAGTAGGTAATGCTTCTGTTCATCAGCCAGAATCGAACCCAAGTTACAGCCATAACTATAATTTTTCCTGTGATCATCTTCCTGAACCAGATCGCCGGAAGCATGCAAGAGAAACTCATTTCGGTTCTCCACATTTTCAAAACACCCTGCAAGATGTAGTCATTCCGGCGTCTATCCGGTCTCCGGTATCAGAAAGCGGACAAGCAAGGTGGTCCAGTGCAAGTGAGCTTGCCAGTTTTCCATCGTCTAAAGATCAAGAAAATTTATTACGCTTTGAAAATTCTAGTTATTGGGTCGATAGATCAGTTCAAAATAGCTCTCAACAAGGTCTTTCTCTATCACTCTCATCGAATCCACCTTCCAAATCGCCGGCTTTTCAGCTTGAAGATGGCTGTGCGTCCGAAGATTTGGAGCAAAGCGGTGGTTTTGACAAGTATAAAAAAGATCCAGTCGCCGGATTATCTGGCTCTTTCAGTTCGATATCAAAACCGTCCGCCATTAGTAAACGCTGTGGAAAGTCAATCCAAGATATAGTTTGCGTTTCTTCAAACACTCGCAGAAACACTGGTCCTCTCGGTCCTTTCACCGGCTACTCAATCATTTTGAAGCGTTCAAAATTTTTAAAGCCTGCCCAGCAATTATTAGATCAAATTTGTGGTAAAAGTAGATTAAAGTTTGGAAGAACGCGCGACGTGTTGAATAGAACATCTGGAGAAGTCAGTGTCTCAGTTTCTGCTGATGTTTCCGATGCGACTGCAACTGAAGCTGTGTCCAAGGGTTATAACTTAACTTCGTCGTCGTCTATATTTTATGGTCCGAACGAAACCAGTTGTGTTAAAGCCGGGAGCTTTTTCTCTGAACCAGTTCTTCCAGACATCCAACGGAAGAAAGTTAGGCTACTGCACATAATGGAAGAGGTTTGCCGAAGATACAGACAGTATAATCAACAAATGCAAATGGCTGTTTCGTCGTTTGAATCCGTTGCTGGGCTTGGGTCGGCTATGCCATTCATGTCGTTTGCGTTGAAGACAGTCTCTAGGCAATTTAAGTGTCTGAAGAATGTAGTTTCCGAGCAGGTGAGGCATGTCCGGCGAGGGATGGCTGAAGAATTAACGTCCCAAAAAGTTGAAGGGAGTAGTGGGCAGATGAGATGCGGTGAAGCAAGCTTGGAAAATTATGGTTATGGCGATGGTGGGGATGGCTTCCGATTGTTCCATCCCCATCAACATCTGTGGAAGCCCCAGCGAGGCCTACCTGAAAGAGCTGTTGTTATTCTTAGAGCTTGGCTTTTCGAACATTTTCTTCACCCGTACCCAACCGATGCTGATAAGCTTATGTTATCCACTCAAACAGGCTTATCTCGAAACCAGATATCAAACTGGTTTATAAATGCTCGAGTGAGAGTGTGGAAGCCGATGGTTGAAGAAATACACATCCTAGAAACTAGAGAGCCGAGCGAAACAAACCAAATTCACGACCTGAGAAACCATTCAGAGAGTTTCAGTCAGCCAAACCCTGGAGGAATTGACGATCAGGGTCAGCCATTACAGTGCTTGGATGAAGACAACACATGGTGTAGCAGCCTTGAGAAGCGGTCGAGAGTGGAGAATGAAGAACCATTTCCGGACAGCTTCAATGAGCCACCCATGATGGAGTTTATGCCCTACGACGGCGGTGTGTCTTTAACGTTAGGGCTCCGGCATGGGGTGGAGAATTCTCAGCAACAGCTGCTGTTGCAACAACAGAATCAACTTAGAAGACAATGTGGAGGCCACTTTCTTCGTGATTTCGTCGGATAA 2217 44.84 MDLTGVRSEPHVAQQRRRERLRVQQINTSQSLPTDDRQFSFHSELRPDLGQVGNASSLFDPSFLPSEMIGFSSDFNSLPGQSDSIGRQQMSENPLFRSRSISSNLNLSSKVQQQAGDWMLTYGSSLWSAENNPNLMISGEVGNASVHQPESNPSYSHNYNFSCDHLPEPDRRKHARETHFGSPHFQNTLQDVVIPASIRSPVSESGQARWSSASELASFPSSKDQENLLRFENSSYWVDRSVQNSSQQGLSLSLSSNPPSKSPAFQLEDGCASEDLEQSGGFDKYKKDPVAGLSGSFSSISKPSAISKRCGKSIQDIVCVSSNTRRNTGPLGPFTGYSIILKRSKFLKPAQQLLDQICGKSRLKFGRTRDVLNRTSGEVSVSVSADVSDATATEAVSKGYNLTSSSSIFYGPNETSCVKAGSFFSEPVLPDIQRKKVRLLHIMEEVCRRYRQYNQQMQMAVSSFESVAGLGSAMPFMSFALKTVSRQFKCLKNVVSEQVRHVRRGMAEELTSQKVEGSSGQMRCGEASLENYGYGDGGDGFRLFHPHQHLWKPQRGLPERAVVILRAWLFEHFLHPYPTDADKLMLSTQTGLSRNQISNWFINARVRVWKPMVEEIHILETREPSETNQIHDLRNHSESFSQPNPGGIDDQGQPLQCLDEDNTWCSSLEKRSRVENEEPFPDSFNEPPMMEFMPYDGGVSLTLGLRHGVENSQQQLLLQQQNQLRRQCGGHFLRDFVG 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46393445 46396972 + Bda032542.1 Bda09g01453 13703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01453 738 MobiDBLite consensus disorder prediction 1 36 - -
Bda09g01453 738 Gene3D - 554 616 - -
Bda09g01453 738 ProSiteProfiles 'Homeobox' domain profile. 570 611 IPR001356 GO:0003677
Bda09g01453 738 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 64 709 - -
Bda09g01453 738 Pfam Associated with HOX 340 495 IPR006563 -
Bda09g01453 738 SUPERFAMILY Homeodomain-like 555 616 IPR009057 -
Bda09g01453 738 SMART prehox3 335 497 IPR006563 -
Bda09g01453 738 Pfam Homeobox KN domain 568 607 IPR008422 GO:0003677|GO:0006355
Bda09g01453 738 SMART HOX_1 551 615 IPR001356 GO:0003677
Bda09g01453 738 CDD homeodomain 551 612 IPR001356 GO:0003677
Bda09g01453 738 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 64 709 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00751 Bda09g01453 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01377 Bda-Chr3:49928582 Bda09g01453 Bda-Chr9:46393445 4.63E-73 dispersed
Bda05g00950 Bda-Chr5:58019524 Bda09g01453 Bda-Chr9:46393445 1.36E-65 dispersed
Bda09g01453 Bda-Chr9:46393445 Bda03g01628 Bda-Chr3:55639780 4.12E-64 dispersed
Bda02g00751 Bda-Chr2:48265321 Bda09g01453 Bda-Chr9:46393445 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16453 PF07526 POX 1.80E-35 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01453 - - jre:109019501 517.694