Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01486 | ATGGAACGTACAGACAACTCGCCCGTGAAGTCATCGTCCCTCGTACCACCTTTTCCGAGAGACTCCCGAGGTTCTCTTGAAGTTTTCAATCCTTCTAATTACTCGTCCACATCTCGGCCGACGAACTCCGTCTTCCGACCGAGCCCGACATGGAAGAGCTTGATCGAGCCGCGTGATCGCTCGGAACCGGACAATTTCAAGCTTCCATCCAAATTAAGTGGGGCCAATGAAGAGATCACCACATGGATGGCTCTCAAAGACCCTGCCCCAGAGAAATCACCACCACCACCAACGTTGGTTCAGAAGTCTATTGCTTCGATCATCAACGAAAAATTACCGGCGCCGACTGCGAAACCTGCAGACGAAATCGGCAACGCAGCTCAGCGAGCCGCGGAGTGGGGTCTGGTGCTGAAAACAGATACGGAGACCGGAAAGCCTCAAGGAGTGGGAGTGAGAACTTCCGGTGGAGATGAACCGAATATCGGCAAACCGGAGCATTCGAGAAGAACTTCGAACAACTCGGTTAGAAACTCCGGCGACATGTCGGATGACGGAGGAGGGAAGGAACGAGGGTTTCCGAGAGTGTCAGAGGATTTGAGGGACGCATTGTCGACGTTTCAGCAGACTTTTGTCGTCTCTGACGCGTCGAAACCCGATTATCCGATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGAGCTGATACAGACCCGGAAGATGTGGCGAGGATTAGGGAGGCGTTGCAGGCGGGGACGAGCTACTGTGGGAGGTTATTGAATTATAAGAAAGATGGGACCCCGTTTTGGAATTTACTTACTATTGCACCGATCAAGGATGAGGACGGGAAAGTTCTCAAATTTATTGGGATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAAGATCAGACGATGCGTCCAAATGGATTGCCAGAGTCCTTGATTAGATATGATGCTCGTCAAAAAGATGTGGCCAAAAATTCAGTAACTGAACTTGTTCAAGCCATGAAGAGACCACGATCACTCAGTGAATCATCAAATCATCGTGCGTTTAGAAAATCAGGTGGAGGCGAGCAAGAGGAAAGACCAGAGCCGCCTGTGAGGAGGAAATCAGAGAGTGTTGCTCCGGCCTTGCGAAATTCACAAGGCAGTACTCGAAGATCAATGCAAAGTATTAGTGAATTGCCTGAGAAGAAACAAAGAAAATCCATCCGTCTCTCTTTCATGGGGATAATTCCTAAAAATCAGCCGAATAGTGATAGCTTTGGAGATGGCGTAAATGTGGATTTTGAGGAGAGTGACGACGACGATTACGATGATGATGAGAGGCCTGAGAGTTTTGATGACAAAGTTAGGCAGAGGGAAATGAGAAAGGGTATTGATCTTGCTACAACACTTGAGCGTATCGAGAAGAACTTTGTCATTACTGATCCAAGGCTGCCTGATAATCCTATTATATTTGCTTCCGATAGCTTCTTGGAGCTAACGGAGTACAGCCGAGAAGAAATCTTAGGAAGAAATTGCAGGTTCTTGCAAGGGCCAGAGACTGATCGAGGGACTGTAAGGAAGATAAGAGAGGCTATCGACAACCAAACTGAAGTTACGGTGCAGCTCATCAACTACACAAAAAGCGGGAAAAAATTCTGGAATCTGTTTCATCTACAAGCTATGAGAGATCAAAAGGGTGAAGTTCAGTATTTCATTGGAGTCCAACTAGATGGGAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCGGAAGATACTGCAATTGAGAGTGAAAAATTGGTAAGAGAAACAGCAGAAAACGTTGATGTGGCAGTCAGAGAACTTCCAGATGCTAATATGAAACCGGAAGATTTATGGATGAACCATTCCAAAGTTGTTCATCCAAAACCCCATAGGAGAGATACTCCACCTTGGAAAGCTATGCAGAAGATTCTAGATAGTGGTGAAGAGATAGGCTTGAAACATTTTAGGCCAGTTAAACCTTTGGGATCTGGTGATACTGGCAGTGTGCACTTGGTGGAACTGTGTGGGACTGGTCAATTCTTTGCAATGAAGGCTATGGATAAGGGAGTTATGCTTAACCGTAATAAGGTGCATAGAGCTTGTGCTGAGAGAGAAATCCTGGACCTCTTGGACCACCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCTGGTGGAGAACTCTTTATGCTTCTGGACAGACAACCAACAAAAGTCCTAAAGGAAGACGCTGTAAGATTTTATGCTGCAGAAGTTGTCATCGCCTTGGAGTACCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTTTACTCCAGGGTGACGGGCACGTCTCCTTGACGGATTTTGACTTGTCGTGTTTGACTTCTTGCAAACCTCAGCTTTTGATGCCAACTACAAATGCAAAGAAAAAAAAGCATAAGAAAACTCAACAAACCCCTATATTTATGGCTGAACCTGTGAGAGCATCGAATTCTTTCGTCGGCACGGAAGAATACATAGCTCCGGAAATCATAACTGGGGCTGGCCATACTAGTGCTGTGGACTGGTGGGCATTGGGTATTCTTCTATACGAGATGCTGTATGGATATACGCCATTTAGGGGTAAGACTAGGCAGAAAACTTTCTCCAATATTCTACAGAGAGATATAAAATTTCCCAGAAGTAAGCAGGTTAGTCTCAGCTGCAAGCAGTTAATATACAGATTATTACACAGGGACCCAAAAAATCGATTGGGATCAAGGGAAGGAGCCAGCGAGATTAAGCGTCATCCTTTTTTTCGCGACGTAACTTGGGCACTCATTCGATCCACGAAAGCTCCTGAGCTCGAGGCTCCCCTTTTTGAGACGAAAGAAGCAGAGCAGAACGTGAAAGACGACGTGGATCCTGCTCTAGATGATTTACAAGTCAATATTTTTTGA | 3036 | 45.78 | MERTDNSPVKSSSLVPPFPRDSRGSLEVFNPSNYSSTSRPTNSVFRPSPTWKSLIEPRDRSEPDNFKLPSKLSGANEEITTWMALKDPAPEKSPPPPTLVQKSIASIINEKLPAPTAKPADEIGNAAQRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNIGKPEHSRRTSNNSVRNSGDMSDDGGGKERGFPRVSEDLRDALSTFQQTFVVSDASKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPEDVARIREALQAGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEDGKVLKFIGMQVEVSKHTEGYKDQTMRPNGLPESLIRYDARQKDVAKNSVTELVQAMKRPRSLSESSNHRAFRKSGGGEQEERPEPPVRRKSESVAPALRNSQGSTRRSMQSISELPEKKQRKSIRLSFMGIIPKNQPNSDSFGDGVNVDFEESDDDDYDDDERPESFDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRGTVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQAMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAIESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRRDTPPWKAMQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELCGTGQFFAMKAMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPTKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGDGHVSLTDFDLSCLTSCKPQLLMPTTNAKKKKHKKTQQTPIFMAEPVRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFSNILQRDIKFPRSKQVSLSCKQLIYRLLHRDPKNRLGSREGASEIKRHPFFRDVTWALIRSTKAPELEAPLFETKEAEQNVKDDVDPALDDLQVNIF | 1011 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 46684330 | 46690253 | - | Bda032581.1 | Bda09g01486 | 13736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01486 | 1011 | Gene3D | PAS domain | 209 | 368 | - | - | |
Bda09g01486 | 1011 | Pfam | Protein kinase domain | 680 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01486 | 1011 | SMART | pac_2 | 272 | 314 | IPR001610 | - | |
Bda09g01486 | 1011 | SMART | pac_2 | 553 | 595 | IPR001610 | - | |
Bda09g01486 | 1011 | SUPERFAMILY | Protein kinase-like (PK-like) | 654 | 986 | IPR011009 | - | |
Bda09g01486 | 1011 | ProSiteProfiles | PAC domain profile. | 269 | 323 | IPR000700 | - | |
Bda09g01486 | 1011 | ProSiteProfiles | PAS repeat profile. | 480 | 549 | IPR000014 | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 353 | 464 | - | - | |
Bda09g01486 | 1011 | Gene3D | Phosphorylase Kinase; domain 1 | 676 | 994 | - | - | |
Bda09g01486 | 1011 | CDD | STKc_phototropin_like | 675 | 984 | - | - | |
Bda09g01486 | 1011 | Gene3D | PAS domain | 464 | 629 | - | - | |
Bda09g01486 | 1011 | ProSiteProfiles | PAS repeat profile. | 195 | 266 | IPR000014 | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Bda09g01486 | 1011 | CDD | PAS | 491 | 591 | IPR000014 | - | |
Bda09g01486 | 1011 | ProSitePatterns | Protein kinases ATP-binding region signature. | 683 | 706 | IPR017441 | GO:0005524 | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 445 | 462 | - | - | |
Bda09g01486 | 1011 | SMART | serkin_6 | 677 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01486 | 1011 | Gene3D | Transferase(Phosphotransferase) domain 1 | 761 | 985 | - | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 393 | 409 | - | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 360 | 387 | - | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 138 | 193 | - | - | |
Bda09g01486 | 1011 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 798 | 810 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g01486 | 1011 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 218 | 308 | IPR035965 | - | |
Bda09g01486 | 1011 | ProSiteProfiles | PAC domain profile. | 550 | 604 | IPR000700 | - | |
Bda09g01486 | 1011 | Pfam | PAS domain | 217 | 312 | IPR000014 | - | |
Bda09g01486 | 1011 | Pfam | PAS domain | 499 | 591 | IPR000014 | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Bda09g01486 | 1011 | ProSiteProfiles | Protein kinase domain profile. | 677 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01486 | 1011 | PANTHER | PHOTOTROPIN-1 | 142 | 1011 | - | - | |
Bda09g01486 | 1011 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 492 | 591 | IPR035965 | - | |
Bda09g01486 | 1011 | PANTHER | FLIPPASE KINASE 1-RELATED | 142 | 1011 | - | - | |
Bda09g01486 | 1011 | MobiDBLite | consensus disorder prediction | 166 | 180 | - | - | |
Bda09g01486 | 1011 | CDD | PAS | 222 | 311 | IPR000014 | - | |
Bda09g01486 | 1011 | SMART | pas_2 | 197 | 267 | IPR000014 | - | |
Bda09g01486 | 1011 | SMART | pas_2 | 478 | 547 | IPR000014 | - | |
Bda09g01486 | 1011 | TIGRFAM | sensory_box: PAS domain S-box protein | 221 | 315 | IPR000014 | - | |
Bda09g01486 | 1011 | TIGRFAM | sensory_box: PAS domain S-box protein | 501 | 591 | IPR000014 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00455 | Bda-Chr6:6582510 | Bda09g01486 | Bda-Chr9:46684330 | 2.34E-27 | dispersed | |
Bda09g01486 | Bda-Chr9:46684330 | Bda13g00562 | Bda-Chr13:6565897 | 0 | dispersed | |
Bda10g00636 | Bda-Chr10:40402956 | Bda09g01486 | Bda-Chr9:46684330 | 2.74E-48 | dispersed | |
Bda05g00756 | Bda-Chr5:56066818 | Bda09g01486 | Bda-Chr9:46684330 | 1.00E-30 | transposed | |
Bda15g00404 | Bda-Chr15:6952390 | Bda09g01486 | Bda-Chr9:46684330 | 3.08E-54 | transposed | |
Bda02g00791 | Bda-Chr2:48624228 | Bda09g01486 | Bda-Chr9:46684330 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69827 | PF00069 | Pkinase | 5.00E-64 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01486 | K20715 | - | vvi:100262213 | 1535.01 |