Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01486 ATGGAACGTACAGACAACTCGCCCGTGAAGTCATCGTCCCTCGTACCACCTTTTCCGAGAGACTCCCGAGGTTCTCTTGAAGTTTTCAATCCTTCTAATTACTCGTCCACATCTCGGCCGACGAACTCCGTCTTCCGACCGAGCCCGACATGGAAGAGCTTGATCGAGCCGCGTGATCGCTCGGAACCGGACAATTTCAAGCTTCCATCCAAATTAAGTGGGGCCAATGAAGAGATCACCACATGGATGGCTCTCAAAGACCCTGCCCCAGAGAAATCACCACCACCACCAACGTTGGTTCAGAAGTCTATTGCTTCGATCATCAACGAAAAATTACCGGCGCCGACTGCGAAACCTGCAGACGAAATCGGCAACGCAGCTCAGCGAGCCGCGGAGTGGGGTCTGGTGCTGAAAACAGATACGGAGACCGGAAAGCCTCAAGGAGTGGGAGTGAGAACTTCCGGTGGAGATGAACCGAATATCGGCAAACCGGAGCATTCGAGAAGAACTTCGAACAACTCGGTTAGAAACTCCGGCGACATGTCGGATGACGGAGGAGGGAAGGAACGAGGGTTTCCGAGAGTGTCAGAGGATTTGAGGGACGCATTGTCGACGTTTCAGCAGACTTTTGTCGTCTCTGACGCGTCGAAACCCGATTATCCGATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGAGCTGATACAGACCCGGAAGATGTGGCGAGGATTAGGGAGGCGTTGCAGGCGGGGACGAGCTACTGTGGGAGGTTATTGAATTATAAGAAAGATGGGACCCCGTTTTGGAATTTACTTACTATTGCACCGATCAAGGATGAGGACGGGAAAGTTCTCAAATTTATTGGGATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAAGATCAGACGATGCGTCCAAATGGATTGCCAGAGTCCTTGATTAGATATGATGCTCGTCAAAAAGATGTGGCCAAAAATTCAGTAACTGAACTTGTTCAAGCCATGAAGAGACCACGATCACTCAGTGAATCATCAAATCATCGTGCGTTTAGAAAATCAGGTGGAGGCGAGCAAGAGGAAAGACCAGAGCCGCCTGTGAGGAGGAAATCAGAGAGTGTTGCTCCGGCCTTGCGAAATTCACAAGGCAGTACTCGAAGATCAATGCAAAGTATTAGTGAATTGCCTGAGAAGAAACAAAGAAAATCCATCCGTCTCTCTTTCATGGGGATAATTCCTAAAAATCAGCCGAATAGTGATAGCTTTGGAGATGGCGTAAATGTGGATTTTGAGGAGAGTGACGACGACGATTACGATGATGATGAGAGGCCTGAGAGTTTTGATGACAAAGTTAGGCAGAGGGAAATGAGAAAGGGTATTGATCTTGCTACAACACTTGAGCGTATCGAGAAGAACTTTGTCATTACTGATCCAAGGCTGCCTGATAATCCTATTATATTTGCTTCCGATAGCTTCTTGGAGCTAACGGAGTACAGCCGAGAAGAAATCTTAGGAAGAAATTGCAGGTTCTTGCAAGGGCCAGAGACTGATCGAGGGACTGTAAGGAAGATAAGAGAGGCTATCGACAACCAAACTGAAGTTACGGTGCAGCTCATCAACTACACAAAAAGCGGGAAAAAATTCTGGAATCTGTTTCATCTACAAGCTATGAGAGATCAAAAGGGTGAAGTTCAGTATTTCATTGGAGTCCAACTAGATGGGAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCGGAAGATACTGCAATTGAGAGTGAAAAATTGGTAAGAGAAACAGCAGAAAACGTTGATGTGGCAGTCAGAGAACTTCCAGATGCTAATATGAAACCGGAAGATTTATGGATGAACCATTCCAAAGTTGTTCATCCAAAACCCCATAGGAGAGATACTCCACCTTGGAAAGCTATGCAGAAGATTCTAGATAGTGGTGAAGAGATAGGCTTGAAACATTTTAGGCCAGTTAAACCTTTGGGATCTGGTGATACTGGCAGTGTGCACTTGGTGGAACTGTGTGGGACTGGTCAATTCTTTGCAATGAAGGCTATGGATAAGGGAGTTATGCTTAACCGTAATAAGGTGCATAGAGCTTGTGCTGAGAGAGAAATCCTGGACCTCTTGGACCACCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCTGGTGGAGAACTCTTTATGCTTCTGGACAGACAACCAACAAAAGTCCTAAAGGAAGACGCTGTAAGATTTTATGCTGCAGAAGTTGTCATCGCCTTGGAGTACCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTTTACTCCAGGGTGACGGGCACGTCTCCTTGACGGATTTTGACTTGTCGTGTTTGACTTCTTGCAAACCTCAGCTTTTGATGCCAACTACAAATGCAAAGAAAAAAAAGCATAAGAAAACTCAACAAACCCCTATATTTATGGCTGAACCTGTGAGAGCATCGAATTCTTTCGTCGGCACGGAAGAATACATAGCTCCGGAAATCATAACTGGGGCTGGCCATACTAGTGCTGTGGACTGGTGGGCATTGGGTATTCTTCTATACGAGATGCTGTATGGATATACGCCATTTAGGGGTAAGACTAGGCAGAAAACTTTCTCCAATATTCTACAGAGAGATATAAAATTTCCCAGAAGTAAGCAGGTTAGTCTCAGCTGCAAGCAGTTAATATACAGATTATTACACAGGGACCCAAAAAATCGATTGGGATCAAGGGAAGGAGCCAGCGAGATTAAGCGTCATCCTTTTTTTCGCGACGTAACTTGGGCACTCATTCGATCCACGAAAGCTCCTGAGCTCGAGGCTCCCCTTTTTGAGACGAAAGAAGCAGAGCAGAACGTGAAAGACGACGTGGATCCTGCTCTAGATGATTTACAAGTCAATATTTTTTGA 3036 45.78 MERTDNSPVKSSSLVPPFPRDSRGSLEVFNPSNYSSTSRPTNSVFRPSPTWKSLIEPRDRSEPDNFKLPSKLSGANEEITTWMALKDPAPEKSPPPPTLVQKSIASIINEKLPAPTAKPADEIGNAAQRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNIGKPEHSRRTSNNSVRNSGDMSDDGGGKERGFPRVSEDLRDALSTFQQTFVVSDASKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPEDVARIREALQAGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEDGKVLKFIGMQVEVSKHTEGYKDQTMRPNGLPESLIRYDARQKDVAKNSVTELVQAMKRPRSLSESSNHRAFRKSGGGEQEERPEPPVRRKSESVAPALRNSQGSTRRSMQSISELPEKKQRKSIRLSFMGIIPKNQPNSDSFGDGVNVDFEESDDDDYDDDERPESFDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRGTVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQAMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAIESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRRDTPPWKAMQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELCGTGQFFAMKAMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPTKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGDGHVSLTDFDLSCLTSCKPQLLMPTTNAKKKKHKKTQQTPIFMAEPVRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFSNILQRDIKFPRSKQVSLSCKQLIYRLLHRDPKNRLGSREGASEIKRHPFFRDVTWALIRSTKAPELEAPLFETKEAEQNVKDDVDPALDDLQVNIF 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46684330 46690253 - Bda032581.1 Bda09g01486 13736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01486 1011 Gene3D PAS domain 209 368 - -
Bda09g01486 1011 Pfam Protein kinase domain 680 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01486 1011 SMART pac_2 272 314 IPR001610 -
Bda09g01486 1011 SMART pac_2 553 595 IPR001610 -
Bda09g01486 1011 SUPERFAMILY Protein kinase-like (PK-like) 654 986 IPR011009 -
Bda09g01486 1011 ProSiteProfiles PAC domain profile. 269 323 IPR000700 -
Bda09g01486 1011 ProSiteProfiles PAS repeat profile. 480 549 IPR000014 -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 353 464 - -
Bda09g01486 1011 Gene3D Phosphorylase Kinase; domain 1 676 994 - -
Bda09g01486 1011 CDD STKc_phototropin_like 675 984 - -
Bda09g01486 1011 Gene3D PAS domain 464 629 - -
Bda09g01486 1011 ProSiteProfiles PAS repeat profile. 195 266 IPR000014 -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 1 73 - -
Bda09g01486 1011 CDD PAS 491 591 IPR000014 -
Bda09g01486 1011 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Bda09g01486 1011 MobiDBLite consensus disorder prediction 445 462 - -
Bda09g01486 1011 SMART serkin_6 677 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01486 1011 Gene3D Transferase(Phosphotransferase) domain 1 761 985 - -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 393 409 - -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 360 387 - -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 138 193 - -
Bda09g01486 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Bda09g01486 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 218 308 IPR035965 -
Bda09g01486 1011 ProSiteProfiles PAC domain profile. 550 604 IPR000700 -
Bda09g01486 1011 Pfam PAS domain 217 312 IPR000014 -
Bda09g01486 1011 Pfam PAS domain 499 591 IPR000014 -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 26 49 - -
Bda09g01486 1011 ProSiteProfiles Protein kinase domain profile. 677 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01486 1011 PANTHER PHOTOTROPIN-1 142 1011 - -
Bda09g01486 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 492 591 IPR035965 -
Bda09g01486 1011 PANTHER FLIPPASE KINASE 1-RELATED 142 1011 - -
Bda09g01486 1011 MobiDBLite consensus disorder prediction 166 180 - -
Bda09g01486 1011 CDD PAS 222 311 IPR000014 -
Bda09g01486 1011 SMART pas_2 197 267 IPR000014 -
Bda09g01486 1011 SMART pas_2 478 547 IPR000014 -
Bda09g01486 1011 TIGRFAM sensory_box: PAS domain S-box protein 221 315 IPR000014 -
Bda09g01486 1011 TIGRFAM sensory_box: PAS domain S-box protein 501 591 IPR000014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00455 Bda-Chr6:6582510 Bda09g01486 Bda-Chr9:46684330 2.34E-27 dispersed
Bda09g01486 Bda-Chr9:46684330 Bda13g00562 Bda-Chr13:6565897 0 dispersed
Bda10g00636 Bda-Chr10:40402956 Bda09g01486 Bda-Chr9:46684330 2.74E-48 dispersed
Bda05g00756 Bda-Chr5:56066818 Bda09g01486 Bda-Chr9:46684330 1.00E-30 transposed
Bda15g00404 Bda-Chr15:6952390 Bda09g01486 Bda-Chr9:46684330 3.08E-54 transposed
Bda02g00791 Bda-Chr2:48624228 Bda09g01486 Bda-Chr9:46684330 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69827 PF00069 Pkinase 5.00E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01486 K20715 - vvi:100262213 1535.01