Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01488 ATGGAACGGAGGATTGCAACTCTGGAGTTTGATCGAGATCGAAAATCCATGGGAGTGATTGCTTCTTCTAGCTCCGGAAGTAATTTATTACTAGTGAAGGGCGCAGTGGAAAATCTCTTAGAGCGAAGTTCATATATTCAGTTGCTTGATGGCTCTGTAGTGGAACTGGATGATTATTCAAGGAAGGTTATCTTAGAAAGCCTTCGTGAAATGTCCACTGGTGCATTGAGATGTTTGGGTTTTGCATATAAGGAAGACCTTGGAGAGTTTTCGCAATATGACGGAGATGAAGAGCATCCCGCTCATGAGCTTCTACTTAACCCATCCAATTACTCCTTAATTGAGAGTAATTTGATCTTTGTTGGTTTGGTGGGCCTGAGGGATCCTCCTCGGAAAGAGGTACGTCAAGCTATTGAAGACTGCAAAGCTGCAGGAATTCGCGTCATGGTTATAACAGGGGACAACAAGAATACAGCTGAAGCTATATGCCGTGAAATAGGTGTATTTGGATCTCATGAAAATATTATCTCAAAAAGCTTGACAGGAACAGAATTCATTGATATGGACCACCAAAGTCAGAAAACACATTTGGAACAAACTGGAGGGCTCCTGTTTTCTAGGGCTGAACCAAGACATAAACAAGAGATTGTCAGGTTACTCAAGGAGGACAGTGAAGTTGTTGCTATGACCGGTGATGGAATCAATGATGCACCTGCCCTTAAATTAGCAGATATTGGAATTGCAATGGGCATTGCAGGGACCGAGGTTGCTAAGGAAGCCTCTGACATGGTGCTAGCAGATGATAATTTTAGCTCTATAGTTGCTGCAGTTGGTGAAGGAAGATCTATTTACAACAATATGAAGGCATTTATAAGGTACATGATTTCTTCAAATATTGGTGAGGTTGCCTCCATATTTCTGACAGCTTCTCTGGGTATTCCTGAAGGCATGATCCCTGTTCAGCTTCTCTGGGTCAATCTTGTCACAGATGGCCCCCCTGCAACGGCTCTCGGATTCAATCCTCCAGACAAAGACATAATGAAGAAGCCCCCACGAAGAAGTAATGATTCATTGATTACTGCTTGGATTTTGTTCCGCTATCTGGTTATCGGAGTCTACGTTGGAATAGCCACAGTTGGAGTGTTTGTCATCTGGTACACTCATTCTTCATTCTTAGGCATTGACTTGAGTGGGGATGGCCATAGTCTTGTTACGTACTCCCAACTTGCGAGCTGGGATCAATGCCCTTCTTGGGAAGGATTCTCTGTATCGCCCTTTTCAGCTGGCGCTCAAGTCTTCAATTTCGACTCGAATCCATGCAATTATTTCCAGGCCGGTAAAATCAAGGCCTCCACACTCTCTCTTTCGGTCTTGGTTGCAATTGAGATGTTCAATTCCCTCAATGCACTTTCTGAAGATGGGAGTCTTCTCACAATGCCTCCTTGGGTCAACCCTTGGCTCCTTCTCGCCATGTCCATCTCATTTGGGCTGCACTTACTCATCCTTTATGTGCCGTTCTTGGCTCAAGTGTTTGGCATAGTACCTCTTAGTTTAAACGAATGGCTATTGGTCTTGGCGGTTGCTCTTCCCGTGATTATAATTGATGAGATTTTGAAGTTTGTGGGCAGGTCTATGAGTGGATTCCGGATTTCCGGTTTGAGCAAATCTTCGAAGTGGAAATCAGAGTAA 1689 43.93 MERRIATLEFDRDRKSMGVIASSSSGSNLLLVKGAVENLLERSSYIQLLDGSVVELDDYSRKVILESLREMSTGALRCLGFAYKEDLGEFSQYDGDEEHPAHELLLNPSNYSLIESNLIFVGLVGLRDPPRKEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGSHENIISKSLTGTEFIDMDHQSQKTHLEQTGGLLFSRAEPRHKQEIVRLLKEDSEVVAMTGDGINDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTASLGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNDSLITAWILFRYLVIGVYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCPSWEGFSVSPFSAGAQVFNFDSNPCNYFQAGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFGLHLLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVIIIDEILKFVGRSMSGFRISGLSKSSKWKSE 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46698681 46702292 - Bda032584.1 Bda09g01488 13738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01488 562 PRINTS P-type cation-transporting ATPase superfamily signature 122 133 - -
Bda09g01488 562 PRINTS P-type cation-transporting ATPase superfamily signature 230 249 - -
Bda09g01488 562 PRINTS P-type cation-transporting ATPase superfamily signature 254 266 - -
Bda09g01488 562 PRINTS P-type cation-transporting ATPase superfamily signature 144 154 - -
Bda09g01488 562 Pfam haloacid dehalogenase-like hydrolase 122 244 - -
Bda09g01488 562 Pfam Cation transport ATPase (P-type) 3 46 - -
Bda09g01488 562 PANTHER CALCIUM-TRANSPORTING ATPASE 2 561 - -
Bda09g01488 562 Gene3D - 276 543 - -
Bda09g01488 562 SUPERFAMILY HAD-like 119 334 IPR036412 -
Bda09g01488 562 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 3 134 IPR023299 GO:0000166
Bda09g01488 562 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 204 312 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda09g01488 562 Gene3D - 3 129 IPR023299 GO:0000166
Bda09g01488 562 Gene3D - 130 275 IPR023214 -
Bda09g01488 562 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 2 561 - -
Bda09g01488 562 SUPERFAMILY Calcium ATPase, transmembrane domain M 280 544 IPR023298 -
Bda09g01488 562 Pfam Cation transporting ATPase, C-terminus 315 541 IPR006068 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00797 Bda09g01488 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01381 Bda-Chr8:54563505 Bda09g01488 Bda-Chr9:46698681 3.35E-158 dispersed
Bda09g01488 Bda-Chr9:46698681 Bda12g00373 Bda-Chr12:4278000 7.95E-68 dispersed
Bda02g00797 Bda-Chr2:48657146 Bda09g01488 Bda-Chr9:46698681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01488 K01537 - tcc:18590783 965.681