Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01504 ATGGCAGACGCAGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTTAAGGCTGGTTTTGCTGGAGATGATGCTCCAAGGGCTGTGTTCCCCAGTATTGTGGGTCGTCCAAGGCACACAGGGGTGATGGTCGGTATGGGCCAAAAAGATGCATACGTTGGTGATGAAGCTCAATCCAAACGTGGTATACTAACATTGAAATACCCCATTGAGCATGGAATCGTCAGCAACTGGGATGACATGGAGAAAATTTGGCATCACACTTTTTACAATGAGCTCAGAGTGGCTCCTGAAGAACATCCCGTTCTGCTCACTGAAGCACCTCTAAACCCAAAGGCCAATCGTGAAAAGATGACCCAAATCATGTTTGAGACATTCAACACTCCAGCAATGTATGTGGCAATACAGGCAGTTCTCTCCCTCTATGCCAGTGGACGTACAACTGGTATTGTTTTGGACTCTGGAGATGGTGTCAGCCATACGGTCCCCATTTATGAGGGCTATGCCCTTCCCCATGCCATTCTTCGTCTTGACCTGGCGGGGCGTGACCTCACAGATGCCCTGATGAAAATCCTTACTGAACGTGGCTATTCCTTCACCACCACAGCTGAGCGGGAAATTGTCAGGGACATGAAGGAGAAGCTTGCATATATTGCTCTTGACTATGAGCAGGAACTTGAAACTTCCAAGACTAGTTCTTCTGTTGAGAAGAGCTATGAGCTACCTGATGGACAGGTCATCACAATCGGGGCTGAGCGTTTCCGATGTCCAGAGGTTCTTTTCCAGCCTTCCATGATTGGGATGGAGGCTGCTGGCATTCATGAAACTACATATAATTCCATCATGAAGTGTGACGTTGATATTAGGAAGGATTTGTATGGAAACATTGTTCTTAGTGGCGGCTCTACAATGTTCCCGGAATTGCTGACAGAATGA 945 47.3 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPELLTE 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46817275 46819267 + Bda032603.1 Bda09g01504 13754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01504 314 Gene3D Actin; Chain A, domain 4 184 270 - -
Bda09g01504 314 SUPERFAMILY Actin-like ATPase domain 149 311 IPR043129 -
Bda09g01504 314 PRINTS Actin signature 142 161 IPR004000 -
Bda09g01504 314 PRINTS Actin signature 28 37 IPR004000 -
Bda09g01504 314 PRINTS Actin signature 63 85 IPR004000 -
Bda09g01504 314 PRINTS Actin signature 117 130 IPR004000 -
Bda09g01504 314 PRINTS Actin signature 238 254 IPR004000 -
Bda09g01504 314 PRINTS Actin signature 51 62 IPR004000 -
Bda09g01504 314 PANTHER ACTIN 1 310 IPR004000 -
Bda09g01504 314 Gene3D - 1 151 - -
Bda09g01504 314 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Bda09g01504 314 PANTHER ACTIN-4 1 310 - -
Bda09g01504 314 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Bda09g01504 314 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Bda09g01504 314 SMART actin_3 7 314 IPR004000 -
Bda09g01504 314 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Bda09g01504 314 Gene3D - 152 311 - -
Bda09g01504 314 Pfam Actin 5 311 IPR004000 -
Bda09g01504 314 Gene3D Actin; Chain A, domain 2 34 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01504 Bda-Chr9:46817275 Bda15g00349 Bda-Chr15:6357586 0 dispersed
Bda02g00206 Bda-Chr2:37365864 Bda09g01504 Bda-Chr9:46817275 1.43E-07 transposed
Bda14g00128 Bda-Chr14:873558 Bda09g01504 Bda-Chr9:46817275 0 wgd
Bda15g00357 Bda-Chr15:6440329 Bda09g01504 Bda-Chr9:46817275 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01504 K10355 - psom:113323526 616.305