Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01506 ATGGCGGTCGCTAATTTGGCTTCGTGTTTTACCCCTCTAATCATCGTTTGTTTGTTTGTTTTCTGTCCTGCCCCCATTGTTACCCTCAACATCACCACCCTTCTGTCCTCCTTTCCTGAACTCTCAGCTTTCACCGCCCTCCTTTCTCCGTCCATTGTTTCCGATCTCAGCTCTCGTTCTTCTCTCACCCTCCTCGCCGTCCCCAATTCTTACCTCTCCACCTCCTCCGACCTTACCCGCCGCTTTTCGGGCACGTCTCTGGCCGACGTCCTCCGTTATCACGTGCTTCTTGAATATCTCTCTTGGTCCGATTTTACCGAGATCCCTCCTTCCGGCAAGCTCGTCACTACTCTTTTCCAAACCACCGGCCGCGCTACTAGCGATTTTGGCTCCGTGAATATCACCAGAGACGCATCCAGTGGCTTCGTCTCCGTTCGCTCCACTGTTCCTTATTCTGCCTCTAACGCCACTGTTCTTTATCTTATCAAGAATCTTCCTTACAATGTGAGCATCTTCGCTGTTGATTCGCTTCTCGTCCCCTACGGAATTGATCTGATGGCGTCGGAGACTCGACCTCCGCCAGGTCTGAACATCACCAAGGCGTTAATTGACGGCCATAACTTCAACGTCGCTGCCTCCATGTTACTGGCCTCCGGCGTGGTCAGCGATTTTGAAGCCGATGAAGGTGGAGCAGGAATTACCCTCTTCGTTCCGACTGATTCTGCGTTCGCAAACCTTCCGCCCACCGTCAAACTACAATCGCTGCCGGCGGAGAAGAAAGCGATGGTACTGAAGTTCCACGTCTTACATTCCTATTACCCGTTGGGTTCGTTGGAATCAATTGTGAATCCAGTTCAGCCGACGTTGGCGCCTCGGACCGAGAAATACAACGAGAATTTGACGGTGAGCTGTGTAAATTTAAGCAGCGATGGTAGCTTGGAGGACGACGATTCAAAGGGGAGCCAGAATCTGCAGTGGGCTCAAGGGAAAGCCGGAGAGGATCGAGTTCACGTCGTCGTTTCGGAGGAGCATGGCTGGGTTTTCGTCGGAATATACGATGGATTCAACGGACCCGATGCACCCGATTTTCTCTTATCAAACTTATACTCTGCCGTACACCAGGAGCTTAAAGGATTATTATGGGACGAAAAGGCGGAACCTTCAGGAGTGGCTGAAAACTCTCATTCAGAAATGGCAGATTCTAAACTAGGTAACAGCGACGATTTTGTCAGGAATCAGTTTGAGCCAGAAAATTCTCCTTGCCCAAGTGGGACAGGGAATTTCAATTCGAATTCAAGAAGAAGAAAGGGTAGAAATTCAAAAGGAAAGTACCGCGGAGCAGTGAACAAATGGGAGGATAATCAGAGAAGATGGAAGTGCGAATGGGATCGAGATAGGCAAGAACTTGATCGGAGGTTAAAAGAAAAGTTAAATCGATCTCATTCTGACGGTATTAGTTCCGTCGATCACGCAGACGTGCTAAAAGCACTGTCTCAGGCGCTGAGGAAGACAGAGGAGGCCTTCTTAGACATTGCAGATAATATGCTTGTGGAAAGTCCTGTGCTAGCTTTAATGGGATCTTGTCTGCTTGTGATGCTAATGAAAGGAGACGATAATTTTTCACGTAAATCTTGGTGTCTTTGTTTTTTTCGTTTGTTTTTTTTTTCGATTATTAGCGTTCGATTCTCAACCGTACTAAATCGATGCTTCTGGTTTTTGCAGCCTAAATGGAACAATGCACTTCTAGAGATGTTCAGAGTAGATTTTGTAGGAACATCTCCATATATCACTTGCTCTCCCTCTCTCTACCACCATAGACTCGGCTCCAAAGATAGGTTTATGATATTATCTTCCGATGGCCTCTACCAGTACTTCACTAATGAAGAAGCTGTTTCGGAAGTTGAACTTTTCATCCAATTACAACCCGAAGGAGACCCCGCCCAGCATCTCATCGAGGAAGTCCTCTTTCGGGCTGCAAGAAAAGCTGGTATGGATTTTCATGAATTGCTCGAAATCCCTGTGGGCGATCGGAGGAAATATCACGATGATGTTTCGATTATCGTTATTTCTTTAGAGGGTAGGATTTGGAGATCTTGTGTATAA 2103 47.27 MAVANLASCFTPLIIVCLFVFCPAPIVTLNITTLLSSFPELSAFTALLSPSIVSDLSSRSSLTLLAVPNSYLSTSSDLTRRFSGTSLADVLRYHVLLEYLSWSDFTEIPPSGKLVTTLFQTTGRATSDFGSVNITRDASSGFVSVRSTVPYSASNATVLYLIKNLPYNVSIFAVDSLLVPYGIDLMASETRPPPGLNITKALIDGHNFNVAASMLLASGVVSDFEADEGGAGITLFVPTDSAFANLPPTVKLQSLPAEKKAMVLKFHVLHSYYPLGSLESIVNPVQPTLAPRTEKYNENLTVSCVNLSSDGSLEDDDSKGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDFLLSNLYSAVHQELKGLLWDEKAEPSGVAENSHSEMADSKLGNSDDFVRNQFEPENSPCPSGTGNFNSNSRRRKGRNSKGKYRGAVNKWEDNQRRWKCEWDRDRQELDRRLKEKLNRSHSDGISSVDHADVLKALSQALRKTEEAFLDIADNMLVESPVLALMGSCLLVMLMKGDDNFSRKSWCLCFFRLFFFSIISVRFSTVLNRCFWFLQPKWNNALLEMFRVDFVGTSPYITCSPSLYHHRLGSKDRFMILSSDGLYQYFTNEEAVSEVELFIQLQPEGDPAQHLIEEVLFRAARKAGMDFHELLEIPVGDRRKYHDDVSIIVISLEGRIWRSCV 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46826262 46833107 - Bda032605.1 Bda09g01506 13756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01506 700 Pfam Fasciclin domain 207 286 IPR000782 -
Bda09g01506 700 Gene3D FAS1 domain 25 180 IPR036378 -
Bda09g01506 700 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 573 700 - -
Bda09g01506 700 Gene3D - 559 696 IPR036457 -
Bda09g01506 700 ProSiteProfiles PPM-type phosphatase domain profile. 316 691 IPR001932 -
Bda09g01506 700 ProSiteProfiles FAS1/BIgH3 domain profile. 195 343 IPR000782 -
Bda09g01506 700 MobiDBLite consensus disorder prediction 394 433 - -
Bda09g01506 700 Gene3D - 294 546 IPR036457 -
Bda09g01506 700 ProSiteProfiles FAS1/BIgH3 domain profile. 28 178 IPR000782 -
Bda09g01506 700 PANTHER PROTEIN PHOSPHATASE 2C 573 700 IPR015655 GO:0004722|GO:0006470
Bda09g01506 700 SUPERFAMILY PP2C-like 330 692 IPR036457 -
Bda09g01506 700 PANTHER PROTEIN PHOSPHATASE 2C 279 539 IPR015655 GO:0004722|GO:0006470
Bda09g01506 700 MobiDBLite consensus disorder prediction 387 446 - -
Bda09g01506 700 Pfam Protein phosphatase 2C 592 647 IPR001932 -
Bda09g01506 700 SMART PP2C_4 317 689 IPR001932 -
Bda09g01506 700 SUPERFAMILY FAS1 domain 188 297 IPR036378 -
Bda09g01506 700 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 279 539 - -
Bda09g01506 700 SUPERFAMILY FAS1 domain 25 180 IPR036378 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00587 Bda09g01506 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01276 Bda-Chr6:43367904 Bda09g01506 Bda-Chr9:46826262 1.16E-37 dispersed
Bda08g00622 Bda-Chr8:6381269 Bda09g01506 Bda-Chr9:46826262 7.12E-39 dispersed
Bda09g01506 Bda-Chr9:46826262 Bda11g00528 Bda-Chr11:5564139 1.55E-12 dispersed
Bda15g00992 Bda-Chr15:18354830 Bda09g01506 Bda-Chr9:46826262 1.71E-15 dispersed
Bda02g00820 Bda-Chr2:48798373 Bda09g01506 Bda-Chr9:46826262 1.70E-78 wgd
Bda03g00781 Bda-Chr3:6534109 Bda09g01506 Bda-Chr9:46826262 7.86E-41 wgd
Bda07g00587 Bda-Chr7:7204788 Bda09g01506 Bda-Chr9:46826262 7.60E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01506 - - cpep:111787179 411.379