Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01508 ATGGCGATGTTCATAGCATCCCTAGCTTGCCTTGTATCAGCAATGTGGGTGGCTGAAGCCAGGATTCCAGGTGTTTACGGCGGCGGAGCTTGGGAAACAGCTCATGCTACCTTCTATGGAGGTTCCGACGCCTCTGGTACAATGGGAGGAGCTTGTGGGTATGGCAATCTGTATAGCCAGGGTTACGGCGTGAACACGGCGGCGCTCAGCACAGCGTTGTTCAACAGCGGCCTGAGCTGTGGCGCCTGCTTCGAGATAAAGTGTGCCAACGATCGACAATGGTGCCATTCCGGAAGCCCATCAATCTACATTACTGCTACTAACTTCTGTCCTCCCAACTTCGCTCTTCCAAACGACAATGGCGGTTGGTGCAACCCACCTCGCCCCCACTTCGACCTTTCTATGCCTATGTTCCTCAAGATCGCCGAATACCGCGCCGGAATCGTACCCGTCGCTTACCGCCGAGTGCCTTGCCGGAAGCAGGGTGGAATGAGATTCACGATCAATGGATTCCAGTACTTCAACTTGCTTCTGATATCGAACGTCGCCGGTGCCGGGGACATCGTGAGGGTGAGCGTAAAGGGGACGAGGACGGGATGGATGAGCATGAGCAGAAACTGGGGTCAAAACTGGCAGTCAAACGCAGCTTTGGTAGGGCAGTCACTGTCATTCAGGGTGACAGGCAGTGACAGAAGAACCTCCACCTCCTGGAACATCGTCCCGGCCCACTGGCAATTCGGTCAAACTTTTACCGGCAAGAACTTCAGAGTATGA 774 54.65 MAMFIASLACLVSAMWVAEARIPGVYGGGAWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIYITATNFCPPNFALPNDNGGWCNPPRPHFDLSMPMFLKIAEYRAGIVPVAYRRVPCRKQGGMRFTINGFQYFNLLLISNVAGAGDIVRVSVKGTRTGWMSMSRNWGQNWQSNAALVGQSLSFRVTGSDRRTSTSWNIVPAHWQFGQTFTGKNFRV 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46841799 46842912 - Bda032607.1 Bda09g01508 13758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bda09g01508 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bda09g01508 257 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Bda09g01508 257 PANTHER EXPANSIN 5 256 - -
Bda09g01508 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Bda09g01508 257 PANTHER EXPANSIN-A15 5 256 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bda09g01508 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Bda09g01508 257 SUPERFAMILY Barwin-like endoglucanases 30 181 IPR036908 -
Bda09g01508 257 Gene3D - 164 255 IPR036749 -
Bda09g01508 257 SMART dpbb_1 66 153 IPR007112 -
Bda09g01508 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Bda09g01508 257 Gene3D - 18 159 IPR036908 -
Bda09g01508 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Bda09g01508 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00824 Bda09g01508 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00964 Bda-Chr5:58134678 Bda09g01508 Bda-Chr9:46841799 1.18E-167 dispersed
Bda09g01508 Bda-Chr9:46841799 Bda15g00345 Bda-Chr15:6303251 3.18E-152 dispersed
Bda01g00226 Bda-Chr1:26088656 Bda09g01508 Bda-Chr9:46841799 2.58E-129 wgd
Bda15g00228 Bda-Chr15:4971370 Bda09g01508 Bda-Chr9:46841799 1.75E-161 wgd
Bda15g00354 Bda-Chr15:6419088 Bda09g01508 Bda-Chr9:46841799 2.98E-152 wgd
Bda02g00824 Bda-Chr2:48835106 Bda09g01508 Bda-Chr9:46841799 0 wgd
Bda03g00784 Bda-Chr3:6554733 Bda09g01508 Bda-Chr9:46841799 1.23E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01508 - - jre:108992990 499.204