Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01510 ATGGATCCACAAATTCCTTCGTTCTCAGATTCGGGTGATGGGTTTGAAATTAATTACGATAATCTCGTATCTTATTTTCCAAATTTAGCGAATGATTTCAAATTCGAAGTTCCATCCCCCGATCTAAACTTCATGGAAAATTCCCTTTTTCTTCACGAGCTGGATCAAGGTGAGTTTGCTCCGGCCGTGAGTGCGAGCTCTGCCGAACTATCTTCTGTTGCATCGGGGAGCTCGAACTCAGACGGAGGATCTTTCCCCTTGCCTGCAGGCTTCACCGCTGGCGTTGACTCTCCTTCAGACGATAGTGACTTCTCCGAAACTGTCAAGTACATGTACCAGATACTTATGGAAGAGAACATAGAGGAGAAGCCTTGTATGTTTTATGATCCTTTGGGGCTCAAACACACGGAAAAATCGTTCTACGATGTTCTAAACAAAAGCTACCCTTCTTCCCCAAACCAGCCTTCTCTGTCTATCGAGAGTCCGAGCAGTGATCATGGAAGTAATGGTAGCACAACTAGTCTCAGCAGCTACGCTGATCGCCAGTGGATGAGTCATTTTGGAGAGACTAACCAGTACTTATCTCAGACATCTTTGGCTGGCGAATCTGTCTTTCTTTCCAAAGTTGAGTCTAGTTCACAGGCTCTTGGTCATAATCAAAACAGTCTGAGATTCAACGGCGAGGACCTGGTTTCCGAGCTGCTGGCTCAGAATATTTATAGCAATAGTGAATCAGTCTTACAGTTCAAGAAAGGATTAGAAGAGGCTAGTAAGTTTCTGCCTGAAGGTAATCAACTATTTCTAAATTTGGGGAGCAGCTCGACGAAGGGAGAGGCTGCACAGGCGAATAACGTGGTAGAGAAAGCTAAAATCGAGAAAGAGAATTCATCAAAAACTTTAGAAGAGATGAATTCTCCTAACAAATCGAAGGGAAGGAAGAATCGTGAAAGGGAAGATGAAGATATGTATTCAGAAGAAGGGCGAAGTAACAAGCAATCGGCAGTTTATGTCGACGAGAGTGAGCTATCTGAGATGTTTGATAGAGTGTTGCTTTTTGGAGATGGAAAAAAATGTAATGAACTATGTAATGGAGATGAAAAGCAGGAAGATGAAGCATGTAAGAAAGATCAGATAAAAAAAGAGCCTCAAACAGCAAATGGAGGGAGAGCTCGAGCAAAGAGACAGGGAAAGAAAACGGAAAATGTGGATTTGACGACCCTTTTGATCCAATGCGCTCAATCTGTATCAAATGATGATCGAAGGACAGCTAACGAATTGATCAAGCAGATAAGGCAGCATTCGTCGCCGATTGGGGATGGCTCCCAGAGATTAGCTCATTACTTTGCTAACGCTCTCGAGGCCAGGTTGGCCGGGACGGGGACTGGAACCAAATTATTCTTCACTTCCTTAGCTTCCAAGAAGATTTCCCCCTTTGATATGTTGAAATCTTACCAAGTTAACCTTGCGGCCTGTCCTTTCAAGAAGATTTCCATATATTTCGCTAACAAAATGATTTTTAAGTTTGCGGAGAAAGCAGAAACCCTTCACATCATAGACTTCGGCATTCTTTATGGATTTCAATGGCCAATCCTAATTCAGCATCTGTCATTACTTCCCGGTGGACCTCCCAAGTTAAGAATTACGGGTATAGAGTTTCCTCAACCTGGCTTCCGCCCCGTCGAGAGAATCGAGGAAACTGGGCATCGATTGGAAAAATATTGCAATCGATTTAACGTGCCTTTTGAGTATAATGCCATAGCTTCGCATAATTGGGAAACCATCCAGATCGAGGATCTTAAACTCAGAAGCAACGAGGTGATTGCTGTGAACTGTATGTTCAGGTTCAAGAACTTACTCGACGAGACAGTTGAAGAAAACAGTCCGAAGAATGCTCTTCTGAGCCTAATCAGGAAGATCAATCCTAGTATTTTTGTGCATGCGATTGTCAATGGATCCTACAATGCCCCATTCTTCATCACACGATTCAGAGAAGCGCTCTTTTACTACTCTGCATTGTTCGATATGTTTGATACCAATATATCTCGCGAAAATGAAGAACGAATGATGTTCGAGAGAGAGTTCTTTGGACGAGAAGCCATGAACGTCATTGCATGTGAGGGCCCAGAAAGAGTCGAGAGGCCTGAAACGTATAAACAATGGCAGGTGAGGTCCTTGAGGGCGGGTTTCAGACAGCTTCCTCTGCAAAAAGAGTTGATTGACAAATTTAGAAGCAAGTTGAAAATGAATTATCACAAAGACTTTGTACTCGACGAAGATGCCAATTGGATGCTTCAAGGATGGAAGGGTCGGATTGTCTTTGCTTCCAGTTGCTGGGTACCGGCCTAA 2346 43.39 MDPQIPSFSDSGDGFEINYDNLVSYFPNLANDFKFEVPSPDLNFMENSLFLHELDQGEFAPAVSASSAELSSVASGSSNSDGGSFPLPAGFTAGVDSPSDDSDFSETVKYMYQILMEENIEEKPCMFYDPLGLKHTEKSFYDVLNKSYPSSPNQPSLSIESPSSDHGSNGSTTSLSSYADRQWMSHFGETNQYLSQTSLAGESVFLSKVESSSQALGHNQNSLRFNGEDLVSELLAQNIYSNSESVLQFKKGLEEASKFLPEGNQLFLNLGSSSTKGEAAQANNVVEKAKIEKENSSKTLEEMNSPNKSKGRKNREREDEDMYSEEGRSNKQSAVYVDESELSEMFDRVLLFGDGKKCNELCNGDEKQEDEACKKDQIKKEPQTANGGRARAKRQGKKTENVDLTTLLIQCAQSVSNDDRRTANELIKQIRQHSSPIGDGSQRLAHYFANALEARLAGTGTGTKLFFTSLASKKISPFDMLKSYQVNLAACPFKKISIYFANKMIFKFAEKAETLHIIDFGILYGFQWPILIQHLSLLPGGPPKLRITGIEFPQPGFRPVERIEETGHRLEKYCNRFNVPFEYNAIASHNWETIQIEDLKLRSNEVIAVNCMFRFKNLLDETVEENSPKNALLSLIRKINPSIFVHAIVNGSYNAPFFITRFREALFYYSALFDMFDTNISRENEERMMFEREFFGREAMNVIACEGPERVERPETYKQWQVRSLRAGFRQLPLQKELIDKFRSKLKMNYHKDFVLDEDANWMLQGWKGRIVFASSCWVPA 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46851450 46853795 + Bda032609.1 Bda09g01510 13760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01510 781 Pfam GRAS domain family 405 778 IPR005202 -
Bda09g01510 781 MobiDBLite consensus disorder prediction 369 398 - -
Bda09g01510 781 MobiDBLite consensus disorder prediction 151 175 - -
Bda09g01510 781 MobiDBLite consensus disorder prediction 278 334 - -
Bda09g01510 781 Coils Coil 279 299 - -
Bda09g01510 781 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 780 IPR005202 -
Bda09g01510 781 ProSiteProfiles GRAS family profile. 395 779 IPR005202 -
Bda09g01510 781 MobiDBLite consensus disorder prediction 287 327 - -
Bda09g01510 781 PANTHER SCARECROW-LIKE PROTEIN 34 71 780 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01510 Bda-Chr9:46851450 Bda01g00689 Bda-Chr1:34048835 5.68E-64 dispersed
Bda14g00135 Bda-Chr14:943576 Bda09g01510 Bda-Chr9:46851450 0 wgd
Bda07g00579 Bda-Chr7:7142356 Bda09g01510 Bda-Chr9:46851450 2.22E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16458 PF03514 GRAS 1.60E-113 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01510 - - jre:109002667 845.884