Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01515 ATGGGTGAGGAGCTGAAGATTAGCGCGTACGAACCCGATGCTGATGGTAGTGATGGTGAGGAGGAGCGAGTGCTAGAATGGGAGGTGGGTTTGCCCAATTCCGAAAATCTGACTCCTCTATCTCAGGTGTTGATATCGCCAGAGCTCGCCTCCGCCTTTAGAATCTCTCCGGAGCCGCGCCGGACCGTACAGGACGTCAATCGGGCATCTCGGACTACGTTATCTAATCTCCGTGGCGGACAATCACAAGCCTTGTCTTCTAATAATTTCAAGTCGTTCGACGATGATCGCACTGACGATATTGACCCCATGGTCGTAGAGTGGGAGGATGGTGGAGATCAAGACGGAGCTGCCTCAGATTCGAGGAAACTGGCGAAGTTCGATTGCGCCGAAGAGGCAGATTCAACTCTGCAAACTGATTCAACCGACGATCCTTCTGGTCGGAGCTCAAAGCGACCGAGGTTAGTCTGGACTCCCCAATTACACAAGCGCTTCGTCGATGTCGTCGCTCACCTAGGAATAAAAAGCGCAGTCCCTAAAACAATTATGCAATTGATGAACGTGGAGGGTTTAACAAGGGAGAACGTCGCTAGTCATCTTCAGAAATACCGTCTCTACTTGAAGAGGATGCAAGGATTCTCCAACGACGGACCATCTTCCTCGGATCAGCTCTTAGCTTCAACGCCATTGCCGAATAGCTCGAAAGAGGTCAACTCCGGCGCCAATTCACTAGGAAATGGACATATTCCGATGCCTATTCCGATCCCGTATATGCCACCTCCGATGATGCCTATGCCTGTCTTTGGGATGCGCCCGGCAAATGGCTACCAGGGGTTCGAGTCTTACCCCTACAACTTGATCCAACAAAGAGACTGGTACGGGAATAAGTACGGTTCTGCTTCGTCTTACCCTCACGCTGCTCCCAGTGCTGATGACAAATGA 942 51.27 MGEELKISAYEPDADGSDGEEERVLEWEVGLPNSENLTPLSQVLISPELASAFRISPEPRRTVQDVNRASRTTLSNLRGGQSQALSSNNFKSFDDDRTDDIDPMVVEWEDGGDQDGAASDSRKLAKFDCAEEADSTLQTDSTDDPSGRSSKRPRLVWTPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGFSNDGPSSSDQLLASTPLPNSSKEVNSGANSLGNGHIPMPIPIPYMPPPMMPMPVFGMRPANGYQGFESYPYNLIQQRDWYGNKYGSASSYPHAAPSADDK 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46870769 46871710 + Bda032614.1 Bda09g01515 13765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01515 313 MobiDBLite consensus disorder prediction 56 98 - -
Bda09g01515 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 307 - -
Bda09g01515 313 MobiDBLite consensus disorder prediction 131 155 - -
Bda09g01515 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 208 IPR017930 -
Bda09g01515 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 307 IPR044841 GO:0003700|GO:0006355
Bda09g01515 313 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Bda09g01515 313 Gene3D - 149 211 - -
Bda09g01515 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 153 205 IPR006447 GO:0003677
Bda09g01515 313 MobiDBLite consensus disorder prediction 215 245 - -
Bda09g01515 313 Pfam Myb-like DNA-binding domain 156 204 IPR001005 -
Bda09g01515 313 MobiDBLite consensus disorder prediction 1 23 - -
Bda09g01515 313 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00582 Bda-Chr3:4845047 Bda09g01515 Bda-Chr9:46870769 6.75E-43 dispersed
Bda09g01515 Bda-Chr9:46870769 Bda11g00187 Bda-Chr11:2406265 9.43E-25 dispersed
Bda09g01515 Bda-Chr9:46870769 Bda11g00695 Bda-Chr11:6921384 1.27E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16459 PF00249 Myb_DNA-binding 1.80E-08 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01515 - - zju:107411020 382.104