Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01550 | ATGAGTGTATTGCTTTTGTTTGTCGTGCAGTTGGAAGAAGTTCTTGGGAAGGGAGCCATGAAAACAGTTTACAGGGCAGTTGATGAAGTTCTTGGAATGGAGGTAGCATGGAATCAGATCAAACTGAATGTGGTTCTTCGTTCGCCCGAAGATTTGGAGAGGCTGTACTCAGAGGTTCACCTCCTCAGCACCCTCAAGCACGATTCGATCATTCGATTCTACACCTCTTGGATCGATGTCGATAACAAGACCTTCAATTTTATCACCGAAATGTTTACTTCTGGTTCACTCAGACAATATAGAATGAAATATTGTCGGGTTGACATTCGAGCTATAAAGAATTGGGCGCGTCAGATCCTACAAGGGCTCGTTTATCTCCACGAGCATGATCCTCCGATAATTCACAGAGACCTAAAGTGCGATAATATCTTTGTTAATGGTCATCTTGGGCAAGTCAAGATTGGTGATCTTGGGCTTGCAGCGATTCTCCGCGGCTCTCAATCGGCTCACAGCACACCAGAGTTCATGGCTCCGGAACTATATGAGGAAGATTACAATGCTCTAGTTGATGTGTACTCATTTGGCATGTGTGTTCTTGAGATGCTTACTTCTGAGTATCCTTATAGTGAATGTGCCAACCCGGCTCAAATTTACAAAAAAGTTACTTCTGGGAAGCTTCCTGCATCATTCTACCGGGTTCAAGATCTCGAGGCACAGCGCTTCATCGGGAAATGTTTGGCCCCTGTTTCAAAGAGAGTTTCCTCAAAAGAACTATTACTCGATCCGTTTCTCTCGGTTGACGAAATTAGGAATGTGCCTGAGGAAAAGTATGAAATCCAGAGGCCATTTTTAAATGCCAAAGAAATGAAGAAATTGCACTTAACTGATGATTTACCAAGAACTGACATGACAATAACAGGGAAGCTGAATCCCGAGGATGATACCCTCTTCCTCAAAGTTCAAATTGCAGATAACAATGGTTCGGGCAGGAACATATATTTTCCATTTGATATTGTGAGTGACACGCCAATTGATGTGGCGAGGGAGATGGTGAAGGAGTTAGAGATAAAGGATTGGGAACCGTTTGAGATTGCAGGGATGATCGAAGGTGAAATATCGGCTTTGGTTCCTAATTCAAAGAGAGATCACTTGTTTCATCCAGAATCTTATCATGGTTATCAAGAATATGCGGACGGACCCCATCATAGCTTTCATTCTTTCTCATCATCCTCCCAAGCAACATTATGCACTTCTCCGAGGACAGATGTCGTTAGTTGGTCTCGAGAAGATTTGCTGGATGATAGCAGCTCCCAGAGCTCTTCCCTTTCTTGGAAATACTCAAACTTGAATTATATTTCTGTGGATGAGCACGAGTTGATGAATAACAAGTTCACGAGCCATAACTGTGTGCAATCTATATCAGGAAAATGTTACAAACAGAGCAAAGGTATATTACAGCTCCAAGAAGCATCGACTTCTAAAGATGCGAGGGCAATGAGCAATCGTAAATTGATAAGGAACAGATCGTTTGTCGATGTGCACAGCCAATTACTACACCGGTCCTTAGTCGAGGAAGTGAATCGAAGACGGTTATTCAAGACAGTTGGAGCAGTGGAAAACATCGGATATCAAGCCCCGTGCGAAGTTTCTCCGAGCCCGAGGTCCGGAAGGGATCGTGGGGATGCTGATTTTATAAGAAATGCAAGAACTAGCAAAGCTCAAGGACATCAAAGGCGTAAGTAA | 1743 | 43.32 | MSVLLLFVVQLEEVLGKGAMKTVYRAVDEVLGMEVAWNQIKLNVVLRSPEDLERLYSEVHLLSTLKHDSIIRFYTSWIDVDNKTFNFITEMFTSGSLRQYRMKYCRVDIRAIKNWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSTPEFMAPELYEEDYNALVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPASFYRVQDLEAQRFIGKCLAPVSKRVSSKELLLDPFLSVDEIRNVPEEKYEIQRPFLNAKEMKKLHLTDDLPRTDMTITGKLNPEDDTLFLKVQIADNNGSGRNIYFPFDIVSDTPIDVAREMVKELEIKDWEPFEIAGMIEGEISALVPNSKRDHLFHPESYHGYQEYADGPHHSFHSFSSSSQATLCTSPRTDVVSWSREDLLDDSSSQSSSLSWKYSNLNYISVDEHELMNNKFTSHNCVQSISGKCYKQSKGILQLQEASTSKDARAMSNRKLIRNRSFVDVHSQLLHRSLVEEVNRRRLFKTVGAVENIGYQAPCEVSPSPRSGRDRGDADFIRNARTSKAQGHQRRK | 580 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47104972 | 47108183 | + | Bda032653.1 | Bda09g01550 | 13800 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01550 | 580 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01550 | 580 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 133 | 145 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g01550 | 580 | CDD | STKc_WNK | 11 | 264 | - | - | |
Bda09g01550 | 580 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 265 | IPR011009 | - | |
Bda09g01550 | 580 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 10 | 555 | - | - | |
Bda09g01550 | 580 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 270 | - | - | |
Bda09g01550 | 580 | MobiDBLite | consensus disorder prediction | 546 | 580 | - | - | |
Bda09g01550 | 580 | ProSiteProfiles | Protein kinase domain profile. | 9 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01550 | 580 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 10 | 555 | - | - | |
Bda09g01550 | 580 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 90 | - | - | |
Bda09g01550 | 580 | SMART | serkin_6 | 9 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00554 | Bda-Chr5:53426529 | Bda09g01550 | Bda-Chr9:47104972 | 6.55E-148 | dispersed | |
Bda09g01550 | Bda-Chr9:47104972 | Bda14g00794 | Bda-Chr14:6140531 | 4.52E-138 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69832 | PF00069 | Pkinase | 9.20E-45 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01550 | K08867 | - | zju:107411446 | 734.176 |