Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01550 ATGAGTGTATTGCTTTTGTTTGTCGTGCAGTTGGAAGAAGTTCTTGGGAAGGGAGCCATGAAAACAGTTTACAGGGCAGTTGATGAAGTTCTTGGAATGGAGGTAGCATGGAATCAGATCAAACTGAATGTGGTTCTTCGTTCGCCCGAAGATTTGGAGAGGCTGTACTCAGAGGTTCACCTCCTCAGCACCCTCAAGCACGATTCGATCATTCGATTCTACACCTCTTGGATCGATGTCGATAACAAGACCTTCAATTTTATCACCGAAATGTTTACTTCTGGTTCACTCAGACAATATAGAATGAAATATTGTCGGGTTGACATTCGAGCTATAAAGAATTGGGCGCGTCAGATCCTACAAGGGCTCGTTTATCTCCACGAGCATGATCCTCCGATAATTCACAGAGACCTAAAGTGCGATAATATCTTTGTTAATGGTCATCTTGGGCAAGTCAAGATTGGTGATCTTGGGCTTGCAGCGATTCTCCGCGGCTCTCAATCGGCTCACAGCACACCAGAGTTCATGGCTCCGGAACTATATGAGGAAGATTACAATGCTCTAGTTGATGTGTACTCATTTGGCATGTGTGTTCTTGAGATGCTTACTTCTGAGTATCCTTATAGTGAATGTGCCAACCCGGCTCAAATTTACAAAAAAGTTACTTCTGGGAAGCTTCCTGCATCATTCTACCGGGTTCAAGATCTCGAGGCACAGCGCTTCATCGGGAAATGTTTGGCCCCTGTTTCAAAGAGAGTTTCCTCAAAAGAACTATTACTCGATCCGTTTCTCTCGGTTGACGAAATTAGGAATGTGCCTGAGGAAAAGTATGAAATCCAGAGGCCATTTTTAAATGCCAAAGAAATGAAGAAATTGCACTTAACTGATGATTTACCAAGAACTGACATGACAATAACAGGGAAGCTGAATCCCGAGGATGATACCCTCTTCCTCAAAGTTCAAATTGCAGATAACAATGGTTCGGGCAGGAACATATATTTTCCATTTGATATTGTGAGTGACACGCCAATTGATGTGGCGAGGGAGATGGTGAAGGAGTTAGAGATAAAGGATTGGGAACCGTTTGAGATTGCAGGGATGATCGAAGGTGAAATATCGGCTTTGGTTCCTAATTCAAAGAGAGATCACTTGTTTCATCCAGAATCTTATCATGGTTATCAAGAATATGCGGACGGACCCCATCATAGCTTTCATTCTTTCTCATCATCCTCCCAAGCAACATTATGCACTTCTCCGAGGACAGATGTCGTTAGTTGGTCTCGAGAAGATTTGCTGGATGATAGCAGCTCCCAGAGCTCTTCCCTTTCTTGGAAATACTCAAACTTGAATTATATTTCTGTGGATGAGCACGAGTTGATGAATAACAAGTTCACGAGCCATAACTGTGTGCAATCTATATCAGGAAAATGTTACAAACAGAGCAAAGGTATATTACAGCTCCAAGAAGCATCGACTTCTAAAGATGCGAGGGCAATGAGCAATCGTAAATTGATAAGGAACAGATCGTTTGTCGATGTGCACAGCCAATTACTACACCGGTCCTTAGTCGAGGAAGTGAATCGAAGACGGTTATTCAAGACAGTTGGAGCAGTGGAAAACATCGGATATCAAGCCCCGTGCGAAGTTTCTCCGAGCCCGAGGTCCGGAAGGGATCGTGGGGATGCTGATTTTATAAGAAATGCAAGAACTAGCAAAGCTCAAGGACATCAAAGGCGTAAGTAA 1743 43.32 MSVLLLFVVQLEEVLGKGAMKTVYRAVDEVLGMEVAWNQIKLNVVLRSPEDLERLYSEVHLLSTLKHDSIIRFYTSWIDVDNKTFNFITEMFTSGSLRQYRMKYCRVDIRAIKNWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSTPEFMAPELYEEDYNALVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPASFYRVQDLEAQRFIGKCLAPVSKRVSSKELLLDPFLSVDEIRNVPEEKYEIQRPFLNAKEMKKLHLTDDLPRTDMTITGKLNPEDDTLFLKVQIADNNGSGRNIYFPFDIVSDTPIDVAREMVKELEIKDWEPFEIAGMIEGEISALVPNSKRDHLFHPESYHGYQEYADGPHHSFHSFSSSSQATLCTSPRTDVVSWSREDLLDDSSSQSSSLSWKYSNLNYISVDEHELMNNKFTSHNCVQSISGKCYKQSKGILQLQEASTSKDARAMSNRKLIRNRSFVDVHSQLLHRSLVEEVNRRRLFKTVGAVENIGYQAPCEVSPSPRSGRDRGDADFIRNARTSKAQGHQRRK 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47104972 47108183 + Bda032653.1 Bda09g01550 13800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01550 580 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01550 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bda09g01550 580 CDD STKc_WNK 11 264 - -
Bda09g01550 580 SUPERFAMILY Protein kinase-like (PK-like) 11 265 IPR011009 -
Bda09g01550 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 555 - -
Bda09g01550 580 Gene3D Transferase(Phosphotransferase) domain 1 92 270 - -
Bda09g01550 580 MobiDBLite consensus disorder prediction 546 580 - -
Bda09g01550 580 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01550 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 10 555 - -
Bda09g01550 580 Gene3D Phosphorylase Kinase; domain 1 8 90 - -
Bda09g01550 580 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00554 Bda-Chr5:53426529 Bda09g01550 Bda-Chr9:47104972 6.55E-148 dispersed
Bda09g01550 Bda-Chr9:47104972 Bda14g00794 Bda-Chr14:6140531 4.52E-138 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69832 PF00069 Pkinase 9.20E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01550 K08867 - zju:107411446 734.176