Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01553 | ATGCCAGAGATCGAAAAGTGTGGCCCCAACAACCCCCTCTTTGGTAGATACGAGCTCGGTAAGCTTCTGGGCTATGGCGCCTTCGCCAAGGTCTACCGTGCTCGCGACCTCCGCTCCGGTCACTGCGTCGCCGTTAAGATTATTAACAAGAAGAAGCTTACTGGAGCCGCCTCCGTGTCCAACATCAAGCGTGAGATATCCATCATGCGCCGACTTCGCCACCCCAACATCGTCTGCCTCCACGAGGTCCTCGCCACCAAGTCTAAGATTTTCTTTGTCATGGAGTTTGTCAAAGGCGGCGAATTGTTCTCCAAGATCGCCAAAGGCAGGTTCACCGAAGATCTCAGCCGCAAGTATTTTCAGCAGCTGATTTCTGCCGTCGGTTTTTGCCATTCTCGAGGAGTTTTTCACCGCGATTTGAAGCCAGAGAATCTTCTTGTCGACGAGAATGGTAATTTAAAGGTTACTGATTTCGGACTGAGCGCCGTCGCGGACCAGATTCGACCCGACGTGCTGCTGCATACTCTCTGCGGCACGCCTGCGTACGTGGCGCCGGAGGTTTTGATAAAAAAAGGCTACGACGGGGCGAAGGTGGATGTGTGGTCGTGCGGGGTCATTCTCTTCGTGCTTAATGCAGGCTACTTACCGTTCAACGATCCAAATCTAATGGCAATGTACAAGAAAATTTACAAGGGCGAGTATCGGTGCCCCAGGTGGATGTCGCCGGACCTCAAGCGGTTTTTATCTCGGCTTCTCGACACAAATCCACAGACGAGGATCACCGTCGATGAAATCTTGATGGATCCGTGGTTCACAAAAGGCGGTTTCGAGGAGATTAAATTCCATGATGTTTGCTCCAAATTCGACGACAAAGAGGACCCTAAAAGTAAGATTCTAACAGCCTTCGATATCATATCGTTCTCGTCTGGATTGGATTTATCTGGTTTGTTCGACGAAGCGCACAATTCTGTTGAAAACAGCGAACGATTCGTATCAGCGGAGACGCCGGCGCAAATATTTGAGAAAATAGAAGAGACATGCAAAAAAGAGAATCTGAGGACGAGGAAGAAAGAGTTGGCGATGGAGGTGGAAGGGGGAGACGAAATCTCCGTGATAGGAATCGAGTTGTACCGATTAACGGAGGGAATGATGATGGTAGAAGTGAGGAAACGAGGCGGAGACGGCTTGTTTTACAGGGAAATATGGAAGAATAAACTCAGGGCTCGGCTTGTTGGGCCGCTAGCTCATCCAGCGGCGGAGACGGAGGCGGAGGCGGAGGCTTCTTCATCGCAGAGGGTTGTGGTGGAGGACGTCGAGTAA | 1320 | 50.91 | MPEIEKCGPNNPLFGRYELGKLLGYGAFAKVYRARDLRSGHCVAVKIINKKKLTGAASVSNIKREISIMRRLRHPNIVCLHEVLATKSKIFFVMEFVKGGELFSKIAKGRFTEDLSRKYFQQLISAVGFCHSRGVFHRDLKPENLLVDENGNLKVTDFGLSAVADQIRPDVLLHTLCGTPAYVAPEVLIKKGYDGAKVDVWSCGVILFVLNAGYLPFNDPNLMAMYKKIYKGEYRCPRWMSPDLKRFLSRLLDTNPQTRITVDEILMDPWFTKGGFEEIKFHDVCSKFDDKEDPKSKILTAFDIISFSSGLDLSGLFDEAHNSVENSERFVSAETPAQIFEKIEETCKKENLRTRKKELAMEVEGGDEISVIGIELYRLTEGMMMVEVRKRGGDGLFYREIWKNKLRARLVGPLAHPAAETEAEAEASSSQRVVVEDVE | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47115029 | 47116348 | + | Bda032656.1 | Bda09g01553 | 13803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01553 | 439 | SMART | serkin_6 | 17 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01553 | 439 | Gene3D | Phosphorylase Kinase; domain 1 | 4 | 98 | - | - | |
Bda09g01553 | 439 | CDD | CIPK_C | 300 | 407 | - | - | |
Bda09g01553 | 439 | Pfam | Protein kinase domain | 17 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01553 | 439 | Pfam | NAF domain | 297 | 356 | IPR004041 | GO:0007165 | |
Bda09g01553 | 439 | Gene3D | Kinase associated domain 1, KA1 | 295 | 412 | - | - | |
Bda09g01553 | 439 | ProSiteProfiles | Protein kinase domain profile. | 17 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda09g01553 | 439 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Bda09g01553 | 439 | ProSitePatterns | Protein kinases ATP-binding region signature. | 23 | 46 | IPR017441 | GO:0005524 | |
Bda09g01553 | 439 | ProSiteProfiles | NAF domain profile. | 294 | 318 | IPR018451 | GO:0007165 | |
Bda09g01553 | 439 | PANTHER | - | 11 | 419 | - | - | |
Bda09g01553 | 439 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 | 11 | 419 | - | - | |
Bda09g01553 | 439 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 275 | - | - | |
Bda09g01553 | 439 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 283 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01553 | Bda-Chr9:47115029 | Bda14g01115 | Bda-Chr14:10125968 | 8.53E-180 | dispersed | |
Bda09g01553 | Bda-Chr9:47115029 | Bda09g01554 | Bda-Chr9:47130198 | 2.14E-143 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69833 | PF00069 | Pkinase | 3.00E-71 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01553 | - | - | tcc:18591074 | 584.334 |