Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01553 ATGCCAGAGATCGAAAAGTGTGGCCCCAACAACCCCCTCTTTGGTAGATACGAGCTCGGTAAGCTTCTGGGCTATGGCGCCTTCGCCAAGGTCTACCGTGCTCGCGACCTCCGCTCCGGTCACTGCGTCGCCGTTAAGATTATTAACAAGAAGAAGCTTACTGGAGCCGCCTCCGTGTCCAACATCAAGCGTGAGATATCCATCATGCGCCGACTTCGCCACCCCAACATCGTCTGCCTCCACGAGGTCCTCGCCACCAAGTCTAAGATTTTCTTTGTCATGGAGTTTGTCAAAGGCGGCGAATTGTTCTCCAAGATCGCCAAAGGCAGGTTCACCGAAGATCTCAGCCGCAAGTATTTTCAGCAGCTGATTTCTGCCGTCGGTTTTTGCCATTCTCGAGGAGTTTTTCACCGCGATTTGAAGCCAGAGAATCTTCTTGTCGACGAGAATGGTAATTTAAAGGTTACTGATTTCGGACTGAGCGCCGTCGCGGACCAGATTCGACCCGACGTGCTGCTGCATACTCTCTGCGGCACGCCTGCGTACGTGGCGCCGGAGGTTTTGATAAAAAAAGGCTACGACGGGGCGAAGGTGGATGTGTGGTCGTGCGGGGTCATTCTCTTCGTGCTTAATGCAGGCTACTTACCGTTCAACGATCCAAATCTAATGGCAATGTACAAGAAAATTTACAAGGGCGAGTATCGGTGCCCCAGGTGGATGTCGCCGGACCTCAAGCGGTTTTTATCTCGGCTTCTCGACACAAATCCACAGACGAGGATCACCGTCGATGAAATCTTGATGGATCCGTGGTTCACAAAAGGCGGTTTCGAGGAGATTAAATTCCATGATGTTTGCTCCAAATTCGACGACAAAGAGGACCCTAAAAGTAAGATTCTAACAGCCTTCGATATCATATCGTTCTCGTCTGGATTGGATTTATCTGGTTTGTTCGACGAAGCGCACAATTCTGTTGAAAACAGCGAACGATTCGTATCAGCGGAGACGCCGGCGCAAATATTTGAGAAAATAGAAGAGACATGCAAAAAAGAGAATCTGAGGACGAGGAAGAAAGAGTTGGCGATGGAGGTGGAAGGGGGAGACGAAATCTCCGTGATAGGAATCGAGTTGTACCGATTAACGGAGGGAATGATGATGGTAGAAGTGAGGAAACGAGGCGGAGACGGCTTGTTTTACAGGGAAATATGGAAGAATAAACTCAGGGCTCGGCTTGTTGGGCCGCTAGCTCATCCAGCGGCGGAGACGGAGGCGGAGGCGGAGGCTTCTTCATCGCAGAGGGTTGTGGTGGAGGACGTCGAGTAA 1320 50.91 MPEIEKCGPNNPLFGRYELGKLLGYGAFAKVYRARDLRSGHCVAVKIINKKKLTGAASVSNIKREISIMRRLRHPNIVCLHEVLATKSKIFFVMEFVKGGELFSKIAKGRFTEDLSRKYFQQLISAVGFCHSRGVFHRDLKPENLLVDENGNLKVTDFGLSAVADQIRPDVLLHTLCGTPAYVAPEVLIKKGYDGAKVDVWSCGVILFVLNAGYLPFNDPNLMAMYKKIYKGEYRCPRWMSPDLKRFLSRLLDTNPQTRITVDEILMDPWFTKGGFEEIKFHDVCSKFDDKEDPKSKILTAFDIISFSSGLDLSGLFDEAHNSVENSERFVSAETPAQIFEKIEETCKKENLRTRKKELAMEVEGGDEISVIGIELYRLTEGMMMVEVRKRGGDGLFYREIWKNKLRARLVGPLAHPAAETEAEAEASSSQRVVVEDVE 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47115029 47116348 + Bda032656.1 Bda09g01553 13803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01553 439 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01553 439 Gene3D Phosphorylase Kinase; domain 1 4 98 - -
Bda09g01553 439 CDD CIPK_C 300 407 - -
Bda09g01553 439 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01553 439 Pfam NAF domain 297 356 IPR004041 GO:0007165
Bda09g01553 439 Gene3D Kinase associated domain 1, KA1 295 412 - -
Bda09g01553 439 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01553 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bda09g01553 439 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Bda09g01553 439 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Bda09g01553 439 PANTHER - 11 419 - -
Bda09g01553 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 11 419 - -
Bda09g01553 439 Gene3D Transferase(Phosphotransferase) domain 1 99 275 - -
Bda09g01553 439 SUPERFAMILY Protein kinase-like (PK-like) 14 283 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01553 Bda-Chr9:47115029 Bda14g01115 Bda-Chr14:10125968 8.53E-180 dispersed
Bda09g01553 Bda-Chr9:47115029 Bda09g01554 Bda-Chr9:47130198 2.14E-143 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69833 PF00069 Pkinase 3.00E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01553 - - tcc:18591074 584.334