Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01554 ATGGACAATAAGACAAATGTGCTGATGAAAAGATATGAAATAGGAAGATTGCTAGGCCAGGGAACCTTTGCAAAGGTCTACTATGGAAGGAGTTTGAGAACTAATCAAAGTGTTGCTATTAAGGTAATAGACAAAGAAAAGGTTTTTAAGGTTGGCATTTATGATCAGATCAAGCGAGAAATATCCGTTATGAGACTTGTTAAACACCCTAACGTCATACGGCTGTATGAAGTCATGGCCACTAAAATGAGGATTTATTTTGTCCTGGAATATGCTAAAGGCGGAGAGCTTTTCAACAAGGTTGCTAAGGGAAGGTTTAAGGAGGAACTTGCTTTGAAATACTTTCAGCAGCTGATAAATGCTGTTGAATTCTGTCACAGTAGGGGAGTTTATCATCGGGATATTAAACCGGAGAACTTATTACTCGATGAGAATGAGAATCTTAAGATTTCTGATTTTGGTTTAAGTGCCCTTGCTGAATCCAAGCGTCAAGATGGACTACTCCATACTACTTGTGGCACTCCGGCTTATGTTGCCCCTGAAGTGATTAATAGGAAAGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGGGTTGTTTTGTTTGTCATTTTGGCAGGGTATCTTCCTTTCCATGATGCAAATTTAATGGCTATGTATCGGAAGATTGAAAAAGCAGATTATAAATGCCCAAATTGGTTTCCTTTTGAGGTTCGGAGGATGCTTTGTCGGATTTTGGATCCAAATCCCTATACCAGGATGTCCATTGCAAAGATAAAGGAAAACTCTTGGTTCAAAAGAGGATTGACCTCCAAACGATCCAAAACTCAGACAGATAGCAAGAATGTGTGTCTTCCTGATACTGTTGTTTCGTGGTCGTGCGAGACTAGTTTGGCTGCAGAGGGAGATCTCAAAGAACTTAAACCAGCCAACTTGAATGCTTTCGATATAATCTCACTTTCAGAGGGTTTTGATCTGACTGGATTGTTTGAAGACAAATCCCAGAAGATGGAAGCAAGGTTTACTTCTAGACAACCTGCAAATGTCATTATTTCTAAGCTGGAAGAAATCGCCAAGCTTTTACGACTGAGGGTGCAGAAGAAGGAAGCTGGTCTGGTAAAATTCGAAGCACAAAAAGAAGGCAGAAGGGGGGTTTTGTCCATTGATGCAGAGATCTTTGAAGTTACTCCATCATTTTACATGGTGGATGTAAAGAAATCAAGTGGAGATACATTGGAATATCAGAGAGTACTGAAAGAAGATATAAAGCCTGCACTCAAGGATATTGTGTGGGTTTGGCAGGGAGATGAACCAGAGCAGCCTAGGCCAGAACAGCAAATACAAGCAGAAGATGAGCAGCAACAGCAGCAAGAGGAGTATCGAGCGCAAAATCTTTAG 1401 40.76 MDNKTNVLMKRYEIGRLLGQGTFAKVYYGRSLRTNQSVAIKVIDKEKVFKVGIYDQIKREISVMRLVKHPNVIRLYEVMATKMRIYFVLEYAKGGELFNKVAKGRFKEELALKYFQQLINAVEFCHSRGVYHRDIKPENLLLDENENLKISDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVILAGYLPFHDANLMAMYRKIEKADYKCPNWFPFEVRRMLCRILDPNPYTRMSIAKIKENSWFKRGLTSKRSKTQTDSKNVCLPDTVVSWSCETSLAAEGDLKELKPANLNAFDIISLSEGFDLTGLFEDKSQKMEARFTSRQPANVIISKLEEIAKLLRLRVQKKEAGLVKFEAQKEGRRGVLSIDAEIFEVTPSFYMVDVKKSSGDTLEYQRVLKEDIKPALKDIVWVWQGDEPEQPRPEQQIQAEDEQQQQQEEYRAQNL 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47130198 47131598 - Bda032657.1 Bda09g01554 13804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01554 466 Pfam NAF domain 310 368 IPR004041 GO:0007165
Bda09g01554 466 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01554 466 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Bda09g01554 466 MobiDBLite consensus disorder prediction 438 466 - -
Bda09g01554 466 CDD CIPK_C 314 428 - -
Bda09g01554 466 Gene3D Kinase associated domain 1, KA1 311 433 - -
Bda09g01554 466 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01554 466 MobiDBLite consensus disorder prediction 448 466 - -
Bda09g01554 466 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 445 - -
Bda09g01554 466 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bda09g01554 466 PANTHER - 2 445 - -
Bda09g01554 466 Gene3D Transferase(Phosphotransferase) domain 1 3 310 - -
Bda09g01554 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bda09g01554 466 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01554 466 SUPERFAMILY Protein kinase-like (PK-like) 8 288 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01554 Bda-Chr9:47130198 Bda14g01118 Bda-Chr14:10175510 0 dispersed
Bda13g01349 Bda-Chr13:35841614 Bda09g01554 Bda-Chr9:47130198 1.35E-122 dispersed
Bda14g01115 Bda-Chr14:10125968 Bda09g01554 Bda-Chr9:47130198 2.15E-135 dispersed
Bda09g01553 Bda-Chr9:47115029 Bda09g01554 Bda-Chr9:47130198 2.14E-143 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69834 PF00069 Pkinase 2.90E-72 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01554 - K07198 cpap:110823886 665.996