Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01561 ATGTCGTCCTCTTTTGGAAGCTTAGATACCTCTGCCAACTCCCATCCAAGCTTCAACTTCATGACCCCCTCCTTCTCCGACCTCTTGACCTTTGGCTCCGATGAGGGGCAGGGGCAGCCGATCAACGGTCATGGCCGTCTTGGGTTGTCCGATAGGATAGCGGAAAGAACAGGGTCTGGTGTGCCCAAGTTCAAGTCCTTTCCTCCGCCGTCACTCCCTTTGTCTCCACCTCCTGTTTCGCCCTCTTCTTACTTCGCTATTCCTGCTGGGTTGAGCCCGGCTGAGCTCTTGGATTCGCCTGTTCTTTTTAACTCCTCTAACCGTACTCTGCCATCTCCGACGACGGGAACATTTCCTTTCCAATCTTACAACTGGAAGAGCAATTCTATTTTCAACCAACAGAATATTAAACAGGAGAGCAAAAATTTCTCCGAGTTCTCCTTCCAAACGCAGCCAAAGCCTCTCTCAGCCAGCACAAATCCAACTTCACAGCAACAAGCATGGAATTCTCGAGAATCATCGAGGCAGAATGAATTTTCATCGGAAATTGGAACAAAAGTGACCGATTTCATACCGACAAAGATAGTTTATCCTCAAAACGACGGTGGAATTCAATCGAACTACAGCGACCACCACCACCAACAGGGTCAGACGATGAGCAGGAGATCGGACGATGGCTACAACTGGCGAAAATACGGCCAAAAACAGGTAAAAGGAAGCGAAAATCCAAGGAGTTATTACAAGTGCACGTTCCCCAGTTGCCCCACCAAGAAGAAGGTCGAAAGGTCCTTAGACGGCCAAATTACTGAGATTGTCTACAAGGGTAGCCATAACCATCCAAAACCTCAGTCAACGAGAAGGTCTTCGTCGTCGTCTTTACCTGCTCCTCAGACCATTCAAGCTTCTAATCCTGTTTCTGAACAATCATATGCCCCTCACGGAAATGGACAAACAGACTCCGCGGCCACACCTGAGAATTCCTCCATAACAATGGGGGACGATGATTTTGAGCAGAGCTCCCACAGCAGTAAACGGGGAGCAGATGACTTTGATGAAGACGAAACAGATGCGAAAAGATGGAAAATGGAGGGTGACAGCGAAGGAATGTCAGCAGCCGGCAGTAGAACAGTGAGAGAGCCTAGAGTCGTAGTTCAAACCACGAGTGACATAGATATTTTAGACGATGGATACAGATGGAGAAAATATGGGCAGAAAGTGGTGAAGGGGAACCCAAATCCAAGGAGCTACTACAAGTGCACAAACCCAGGCTGTCCTGTAAGAAAGCACGTAGAGCGAGCCTCCCATGATTTGAGAGCAGTCATTACAACCTACGAGGGGAAACACAGCCACGATGTTCCAGCCGCACGAGGGAGTGGCTCAGCTGCTGTGATTAAGCCTTCCACTCTTAGCCACGCTCCAAGGCTTCAGAGCTCTCAAGGTCAACCACACTTCGGCCTAGAAATCGCGAGGAACCCCTCGAGTTTTACATTCGGCGACTACGGAATGAATCAGCCACAGTTTAATGAGAATATGTTCTTGAGAACTAAGGAGGAGTTAAAGGATGATGCTTTCTTCGAATCATTGCTGCGTTGA 1593 48.65 MSSSFGSLDTSANSHPSFNFMTPSFSDLLTFGSDEGQGQPINGHGRLGLSDRIAERTGSGVPKFKSFPPPSLPLSPPPVSPSSYFAIPAGLSPAELLDSPVLFNSSNRTLPSPTTGTFPFQSYNWKSNSIFNQQNIKQESKNFSEFSFQTQPKPLSASTNPTSQQQAWNSRESSRQNEFSSEIGTKVTDFIPTKIVYPQNDGGIQSNYSDHHHQQGQTMSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSLPAPQTIQASNPVSEQSYAPHGNGQTDSAATPENSSITMGDDDFEQSSHSSKRGADDFDEDETDAKRWKMEGDSEGMSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHSHDVPAARGSGSAAVIKPSTLSHAPRLQSSQGQPHFGLEIARNPSSFTFGDYGMNQPQFNENMFLRTKEELKDDAFFESLLR 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47169033 47171072 + Bda032664.1 Bda09g01561 13811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01561 530 MobiDBLite consensus disorder prediction 337 365 - -
Bda09g01561 530 SUPERFAMILY WRKY DNA-binding domain 222 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 SMART WRKY_cls 393 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 MobiDBLite consensus disorder prediction 146 183 - -
Bda09g01561 530 Pfam WRKY DNA -binding domain 394 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 Gene3D WRKY domain 380 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 ProSiteProfiles WRKY domain profile. 388 453 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 ProSiteProfiles WRKY domain profile. 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 Gene3D WRKY domain 208 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 MobiDBLite consensus disorder prediction 278 336 - -
Bda09g01561 530 SUPERFAMILY WRKY DNA-binding domain 385 453 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda09g01561 530 MobiDBLite consensus disorder prediction 272 377 - -
Bda09g01561 530 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 43 471 - -
Bda09g01561 530 MobiDBLite consensus disorder prediction 201 228 - -
Bda09g01561 530 MobiDBLite consensus disorder prediction 31 78 - -
Bda09g01561 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 471 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01087 Bda-Chr1:45596473 Bda09g01561 Bda-Chr9:47169033 7.35E-77 dispersed
Bda09g00897 Bda-Chr9:25106065 Bda09g01561 Bda-Chr9:47169033 3.56E-46 dispersed
Bda09g01561 Bda-Chr9:47169033 Bda12g00951 Bda-Chr12:40590110 3.29E-93 dispersed
Bda08g00075 Bda-Chr8:701243 Bda09g01561 Bda-Chr9:47169033 3.72E-17 transposed
Bda02g00883 Bda-Chr2:49193214 Bda09g01561 Bda-Chr9:47169033 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16461 PF03106 WRKY 6.80E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01561 K13424 - qsu:112000434 647.121