Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01563 ATGGCCGCGGGGGCCACAGAGACGGCGACCAAGTTTCAAAGCGCGGACTTTCGGCCAGTCCCTTCTCCTCCTGATTTCCATCGCGATGTTACGGTTTCGACCCACGATGGTATCCACTTCTGGGAATTCATGATTGCAGGTTCAATCGCCGGATCGGTCGAGCACATGGCTATGTTTCCTGTCGACACGGTCAAGACTCATATGCAAGCTCTTAGGTCATGCCCAATGAAATCGGTCGGTGTGCGACAAGCCCTCCGGTCAATTTTGAATTCCGAGGGACCAGCTGGGCTCTATCGCGGGATCGGGGCAATGGCTCTCGGCGCTGGACCAGCCCACGCAGTGTATTTTTCAGTATACGAAATTTGTAAGAAATTCTTCTCGGGAGGGAACGCCAATAATTCAGCTGCCCATGCTATTTCCGGCGTGTTTGCTACGGTTGCTAGCGATGCAGTCTTTACGCCGATGGACATGGTGAAGCAGAGATTACAGTTGGGAAGTAGTCCCAACAATGGAGTTTGGGATTGTGTAAAGAGGGTTCTTCGGGAAGAAGGCTTTCGAGCATTTTATGCGTCCTATAAGACTACTGTCTTGATGAACGCCCCTTATACTGCTGTACATTTCGCAACATACGAGGCTGCAAAGAGGGCTTTGATGGAAATTTCCCCGGAGAGTGCGAGTGATGAGCGGTGGGTCGTTCATGCCACTGCCGGAGCTGCAGCTGGTGCGTCAGCCGCTGTTGTCACAACGCCACTTGATGTTGTTAAAACTCAACTACAGTGTCAGGGTGTATGTGGATGCGATAGATATAAAAATGGATCGATAAGGGATGTCATCAGGAGTATAGTTAGCAAGGATGGAACAAGAGGGCTCATGAGGGGATGGATTCCTAGGATGCTTTTCCATGCTCCTGCAGCAGCTATATGCTGGTCTACCTATGAAGCCTCCAAATCATTCTTCCAACAACTCAAC 969 50.57 MAAGATETATKFQSADFRPVPSPPDFHRDVTVSTHDGIHFWEFMIAGSIAGSVEHMAMFPVDTVKTHMQALRSCPMKSVGVRQALRSILNSEGPAGLYRGIGAMALGAGPAHAVYFSVYEICKKFFSGGNANNSAAHAISGVFATVASDAVFTPMDMVKQRLQLGSSPNNGVWDCVKRVLREEGFRAFYASYKTTVLMNAPYTAVHFATYEAAKRALMEISPESASDERWVVHATAGAAAGASAAVVTTPLDVVKTQLQCQGVCGCDRYKNGSIRDVIRSIVSKDGTRGLMRGWIPRMLFHAPAAAICWSTYEASKSFFQQLN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47179361 47180840 - Bda034161 Bda09g01563 13813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01563 323 Pfam Mitochondrial carrier protein 134 219 IPR018108 -
Bda09g01563 323 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Bda09g01563 323 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Bda09g01563 323 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 323 - -
Bda09g01563 323 SUPERFAMILY Mitochondrial carrier 37 313 IPR023395 -
Bda09g01563 323 Gene3D Mitochondrial carrier domain 22 167 IPR023395 -
Bda09g01563 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Bda09g01563 323 PANTHER MITOFERRIN-1-RELATED 5 323 - -
Bda09g01563 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Bda09g01563 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Bda09g01563 323 Gene3D Mitochondrial carrier domain 168 323 IPR023395 -
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Bda09g01563 323 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00881 Bda-Chr2:49183777 Bda09g01563 Bda-Chr9:47179361 0 dispersed
Bda07g01026 Bda-Chr7:12122694 Bda09g01563 Bda-Chr9:47179361 1.24E-06 dispersed
Bda09g00046 Bda-Chr9:693152 Bda09g01563 Bda-Chr9:47179361 7.42E-09 dispersed
Bda09g01563 Bda-Chr9:47179361 Bda11g01343 Bda-Chr11:14881722 4.85E-18 dispersed
Bda09g01563 Bda-Chr9:47179361 Bda12g00204 Bda-Chr12:2014370 2.15E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01563 K15113 - csv:101215924 535.028