Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01572 ATGGATCCTATTAGTGGTAACAATAGCACGAGTCTCAGCAACAACTCCAACCTTGCTGCAAAGCAACGGCTGCGATGGACACATGAACTTCATGAACGATTTGTAGATTCCGTGGCTCAGCTTGGTGGGCCAGATCGTGCCACGCCCAAAGGTGTTCTTAGAGTGATGGGTGTGCAAGGTTTAACCATATACCACGTTAAAAGTCATTTACAGAAATATCGACTTGCAAAGTACCTTCCTGATTCATCATCAGATGGAAAAAATGCTGACAAGAAAGAATCTGGGGATTTGCTTTCTAATTTGGATGGATCATCGGGAATGCAAATTACTGAAGCACTAAAGCTACAAATGGAGGTTCAGAAACGACTTCATGAACAATTAGAGGTGCAGAGACAATTACAACTGCGAATCGAAGCACAAGGCAAGTACTTGAAAAAGATAATTGAAGAGCAACAAAGACTTACTGGGGTCCTTTCAGAAGTTCCAGCTTCTACCATGTCAGCCGCTATATCAGGTGACAAGAATGAGCCAGCAACACCAGGTGCAACCTCCGAATCTCCCCTCCAGGAAAAGGCTGCTAAGCAATGCGCTCTAGCCAAGAGCCTCTCTCTTGAGGATTCTCTCTCTTCTTCTCATGAGCCATTAACTCCAGATTCTTGCTGCCACGTCAGCCATCCAGATGACAGCCCCAAAGGTGAAAGGTCGACCAAGCAACAACATGCCATTACAGGTGGAGCCTATGGAAAACCCGAAATGGTGCTTACTCATCATATTCTTGAGTCGAGTAGAAGTGCTTCCTTCCAGCAACCCCATTCCACCTCAGGAATTGTAAACAATGAAGATTTAGTTAACGCTAATTCCTGCAACATCTAA 873 44.79 MDPISGNNSTSLSNNSNLAAKQRLRWTHELHERFVDSVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKNADKKESGDLLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLTGVLSEVPASTMSAAISGDKNEPATPGATSESPLQEKAAKQCALAKSLSLEDSLSSSHEPLTPDSCCHVSHPDDSPKGERSTKQQHAITGGAYGKPEMVLTHHILESSRSASFQQPHSTSGIVNNEDLVNANSCNI 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47239047 47241318 - Bda032676.1 Bda09g01572 13822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01572 290 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Bda09g01572 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 14 273 - -
Bda09g01572 290 Coils Coil 110 130 - -
Bda09g01572 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 78 IPR017930 -
Bda09g01572 290 MobiDBLite consensus disorder prediction 168 192 - -
Bda09g01572 290 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Bda09g01572 290 Pfam MYB-CC type transfactor, LHEQLE motif 107 153 IPR025756 -
Bda09g01572 290 MobiDBLite consensus disorder prediction 168 190 - -
Bda09g01572 290 SUPERFAMILY Homeodomain-like 20 75 IPR009057 -
Bda09g01572 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 14 273 IPR044848 GO:0003700
Bda09g01572 290 MobiDBLite consensus disorder prediction 207 240 - -
Bda09g01572 290 MobiDBLite consensus disorder prediction 80 103 - -
Bda09g01572 290 Gene3D - 20 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01487 Bda-Chr3:53135715 Bda09g01572 Bda-Chr9:47239047 2.04E-70 dispersed
Bda05g00988 Bda-Chr5:58314453 Bda09g01572 Bda-Chr9:47239047 2.57E-55 dispersed
Bda07g01170 Bda-Chr7:13944504 Bda09g01572 Bda-Chr9:47239047 8.94E-55 dispersed
Bda09g01572 Bda-Chr9:47239047 Bda13g00487 Bda-Chr13:5755722 1.62E-50 dispersed
Bda10g00450 Bda-Chr10:37341344 Bda09g01572 Bda-Chr9:47239047 4.99E-20 dispersed
Bda12g00346 Bda-Chr12:3983029 Bda09g01572 Bda-Chr9:47239047 2.22E-34 dispersed
Bda02g00896 Bda-Chr2:49319296 Bda09g01572 Bda-Chr9:47239047 2.24E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16463 PF00249 Myb_DNA-binding 4.50E-07 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01572 - - vvi:100248144 386.726