Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01572 | ATGGATCCTATTAGTGGTAACAATAGCACGAGTCTCAGCAACAACTCCAACCTTGCTGCAAAGCAACGGCTGCGATGGACACATGAACTTCATGAACGATTTGTAGATTCCGTGGCTCAGCTTGGTGGGCCAGATCGTGCCACGCCCAAAGGTGTTCTTAGAGTGATGGGTGTGCAAGGTTTAACCATATACCACGTTAAAAGTCATTTACAGAAATATCGACTTGCAAAGTACCTTCCTGATTCATCATCAGATGGAAAAAATGCTGACAAGAAAGAATCTGGGGATTTGCTTTCTAATTTGGATGGATCATCGGGAATGCAAATTACTGAAGCACTAAAGCTACAAATGGAGGTTCAGAAACGACTTCATGAACAATTAGAGGTGCAGAGACAATTACAACTGCGAATCGAAGCACAAGGCAAGTACTTGAAAAAGATAATTGAAGAGCAACAAAGACTTACTGGGGTCCTTTCAGAAGTTCCAGCTTCTACCATGTCAGCCGCTATATCAGGTGACAAGAATGAGCCAGCAACACCAGGTGCAACCTCCGAATCTCCCCTCCAGGAAAAGGCTGCTAAGCAATGCGCTCTAGCCAAGAGCCTCTCTCTTGAGGATTCTCTCTCTTCTTCTCATGAGCCATTAACTCCAGATTCTTGCTGCCACGTCAGCCATCCAGATGACAGCCCCAAAGGTGAAAGGTCGACCAAGCAACAACATGCCATTACAGGTGGAGCCTATGGAAAACCCGAAATGGTGCTTACTCATCATATTCTTGAGTCGAGTAGAAGTGCTTCCTTCCAGCAACCCCATTCCACCTCAGGAATTGTAAACAATGAAGATTTAGTTAACGCTAATTCCTGCAACATCTAA | 873 | 44.79 | MDPISGNNSTSLSNNSNLAAKQRLRWTHELHERFVDSVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKNADKKESGDLLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLTGVLSEVPASTMSAAISGDKNEPATPGATSESPLQEKAAKQCALAKSLSLEDSLSSSHEPLTPDSCCHVSHPDDSPKGERSTKQQHAITGGAYGKPEMVLTHHILESSRSASFQQPHSTSGIVNNEDLVNANSCNI | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47239047 | 47241318 | - | Bda032676.1 | Bda09g01572 | 13822 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01572 | 290 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 21 | 76 | IPR006447 | GO:0003677 | |
Bda09g01572 | 290 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7 | 14 | 273 | - | - | |
Bda09g01572 | 290 | Coils | Coil | 110 | 130 | - | - | |
Bda09g01572 | 290 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 21 | 78 | IPR017930 | - | |
Bda09g01572 | 290 | MobiDBLite | consensus disorder prediction | 168 | 192 | - | - | |
Bda09g01572 | 290 | Pfam | Myb-like DNA-binding domain | 24 | 74 | IPR001005 | - | |
Bda09g01572 | 290 | Pfam | MYB-CC type transfactor, LHEQLE motif | 107 | 153 | IPR025756 | - | |
Bda09g01572 | 290 | MobiDBLite | consensus disorder prediction | 168 | 190 | - | - | |
Bda09g01572 | 290 | SUPERFAMILY | Homeodomain-like | 20 | 75 | IPR009057 | - | |
Bda09g01572 | 290 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 14 | 273 | IPR044848 | GO:0003700 | |
Bda09g01572 | 290 | MobiDBLite | consensus disorder prediction | 207 | 240 | - | - | |
Bda09g01572 | 290 | MobiDBLite | consensus disorder prediction | 80 | 103 | - | - | |
Bda09g01572 | 290 | Gene3D | - | 20 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01487 | Bda-Chr3:53135715 | Bda09g01572 | Bda-Chr9:47239047 | 2.04E-70 | dispersed | |
Bda05g00988 | Bda-Chr5:58314453 | Bda09g01572 | Bda-Chr9:47239047 | 2.57E-55 | dispersed | |
Bda07g01170 | Bda-Chr7:13944504 | Bda09g01572 | Bda-Chr9:47239047 | 8.94E-55 | dispersed | |
Bda09g01572 | Bda-Chr9:47239047 | Bda13g00487 | Bda-Chr13:5755722 | 1.62E-50 | dispersed | |
Bda10g00450 | Bda-Chr10:37341344 | Bda09g01572 | Bda-Chr9:47239047 | 4.99E-20 | dispersed | |
Bda12g00346 | Bda-Chr12:3983029 | Bda09g01572 | Bda-Chr9:47239047 | 2.22E-34 | dispersed | |
Bda02g00896 | Bda-Chr2:49319296 | Bda09g01572 | Bda-Chr9:47239047 | 2.24E-32 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16463 | PF00249 | Myb_DNA-binding | 4.50E-07 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01572 | - | - | vvi:100248144 | 386.726 |