Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01581 ATGAAAACATCTCAGAAGCCCCCAAATTCAGCCAACATCAAAGGATTGTACCATCAGCCTATGCAAGACATAGATTCCTATTATTTGTCTCATTTCCAAGTGTTAGGAAACACTTCCTGTTCTAACCTTGGCAGCCGAGGGACGGTAGTATCCTTTGACTCTTGCAAGGAACAGTTTTTTACTCTCGAATCATCCGCAGCCACCAATGACGTTGGTCCTTGTGATTCCTCCAGTGTCTTTTCAAGCAAAAGCTCCTTTTCCCCACAAGTTTCTCATTCAAGTTCCTCAGATCCACATCATTCCCATGATAACTTATCCGGATCGCCAGCTAGTGGGTGCTCTGTAAACACAGATGACGATGAGTTAAAGCACAAGCTGAGGGAACTGGAGATTTCATTGCTGGGACCAGAATCAGATATTGGCGACAGCTGCTACTGCTCTTTCAACGGTGGGACAAATCGAGCCACCTCAATGGCTACTTGGAAGAATCAAATGGTAGACGAAATTCCCAGATTGAACCTGAAAGAATTACTTATCGGCTGTGCACAATCCATACATGAGGATGATTTATCGACAGCTATGCACTTTATGGAGGCGTTGGAGCAGACGGTGTCAGTATCTGGGGAGCCATTGCAGAGATTGGGTGCTTATTTGCTGGAGGGGTTGAGAGCAAGACTGGAAAGATCAGGAAGTTCAATCTACAAGGCTCTTAAGTGTGAGGAGCCGACAAGCTCGGAGTTAATGTCATATATGTCTATCATCTATGAAATCTGTCCCTACTGGAAGTTTGGTTACTCATCTGCAAATGTTTGCATTCAAGAAGCCATGGAAAATGAACCCAAAATCCACATCATAGATTTCCAAATTGCACAGGGCAGTCAGTGGATACCGCTCATCCAGGATCTTGCAAAACGAGATGGAAATTGTGGGCCACCACTTATCCGCATAACTGGTGTAGACGATTCTCAATCGGCCCATGCTCGGGGAGGGGGACTTCACATTGTAGGGCAGAGGTTGTCACAAGTTGCACAATCGTGTGGAGTACGATTCGAGTTCCATGCTGCGGCTATGTCCGGCAGTGAGGTAGAATTGTGTAATCTTGGGGTACAACCTGGGGAGGCGCTTGCAGTTAACTTTCCTTACGTTTTACATCACATTCCCGATGAGAGTGTGAGCACTCAGAATCACAGAGACCGTTTGTTGAGGTTAGTAAAGAGTTTATCGCCAAAAGTCATCACCATTATCGAGCAGGAATCGAACACGAACACTTCCCCGTTCCTTTCGAGATTCGTCGAGACTTTAGACTATTACACAGCCATGTTCGAATCGATAGATGCAACTCTGCCAAGAGATGACAAGCAGAGGATCAGGGCGGAGCAGCACTGCGTGGCGAGAGACATAGTGAACATGATAGCGTGCGAGGGGGCAGAACGGGAAGAACGGCATGAACTTCTCGGGAAATGGAGGTTGAGATTGTCGATGGCTGGGTTCACACCTTATCCATTGAGCCCGGGGGTGGCAGATGCGGTGAGAAAATTGTTGAAAGAGTACAGTCAGAATTACAGAGTGGAGGAGAGTAAGGAAGCTCTGTATTTGAGGTGGAAGAAGAGAGCTATGGTAACTTCCTCGGCGTGGAGGTAG 1641 46.86 MKTSQKPPNSANIKGLYHQPMQDIDSYYLSHFQVLGNTSCSNLGSRGTVVSFDSCKEQFFTLESSAATNDVGPCDSSSVFSSKSSFSPQVSHSSSSDPHHSHDNLSGSPASGCSVNTDDDELKHKLRELEISLLGPESDIGDSCYCSFNGGTNRATSMATWKNQMVDEIPRLNLKELLIGCAQSIHEDDLSTAMHFMEALEQTVSVSGEPLQRLGAYLLEGLRARLERSGSSIYKALKCEEPTSSELMSYMSIIYEICPYWKFGYSSANVCIQEAMENEPKIHIIDFQIAQGSQWIPLIQDLAKRDGNCGPPLIRITGVDDSQSAHARGGGLHIVGQRLSQVAQSCGVRFEFHAAAMSGSEVELCNLGVQPGEALAVNFPYVLHHIPDESVSTQNHRDRLLRLVKSLSPKVITIIEQESNTNTSPFLSRFVETLDYYTAMFESIDATLPRDDKQRIRAEQHCVARDIVNMIACEGAEREERHELLGKWRLRLSMAGFTPYPLSPGVADAVRKLLKEYSQNYRVEESKEALYLRWKKRAMVTSSAWR 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47274577 47276217 + Bda032685.1 Bda09g01581 13831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01581 546 Pfam GRAS domain family 174 546 IPR005202 -
Bda09g01581 546 PANTHER SCARECROW-LIKE PROTEIN 13 18 545 IPR030005 -
Bda09g01581 546 MobiDBLite consensus disorder prediction 87 115 - -
Bda09g01581 546 MobiDBLite consensus disorder prediction 87 117 - -
Bda09g01581 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 545 IPR005202 -
Bda09g01581 546 ProSiteProfiles GRAS family profile. 165 546 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00409 Bda-Chr6:6245748 Bda09g01581 Bda-Chr9:47274577 0 dispersed
Bda07g00332 Bda-Chr7:4419946 Bda09g01581 Bda-Chr9:47274577 1.19E-162 dispersed
Bda09g01581 Bda-Chr9:47274577 Bda12g00952 Bda-Chr12:40595240 2.23E-94 dispersed
Bda09g01581 Bda-Chr9:47274577 Bda13g00599 Bda-Chr13:6981834 4.81E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16464 PF03514 GRAS 1.80E-127 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01581 - - mcha:111005597 762.681