Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01596 ATGCGCCTAGCCTCATCAGACCTCGCTTCTGGAATACAGCTGACTACCGCACCGACTGTCGTAATGGCTGCGAAACTTGAGTTTCGTTCTCTTTCTCCAAGAGCGAGGCTCATTGGGCTTATGTTTATCTCGTTGATCTCTGCTTCCCGCTACGCTCTGGCCATTACTGACCCTTCCGATGTTCAAGCCCTGCAAGCTCTGTACAGCTCATTGAATAGTTCTCCTGAGCTCATTGGCTGGAAAAGTAGCGGCGGTGATCCCTGTGCAGAGTCATGGAAAGGGATAACCTGTGCGGGTTCAGCTGTTGTTTCCATTGAAGTTTCTGGGTTAGGACTCAATGGGACAATGGGATATGCGCTTGCAAGCCTATATTCATTGAAGAAACTTGATATGAGCAAGAATAGTATCCACGATCCAATCCCTTATCAGTTGCCTCCAAATCTTTCTTCCATAAATCTTGCAGGAAATAACTTAAGTGGGAATCTTCCTTATTCCTTCTACAACATGGTTTCTCTTAATTACATGAATGTTAGTCATAATTCCCTCGTCCAGTCAATCGGTGATGTTTTCTCCAACCTTTCAACCTTAGATCTTTCTTTCAACAACTTTTCAGGGAGTCTTCCTAATTCTTTCAGTTCGCTGTCCAATCTTTCTTCGCTCTATTTGGAGAATAATCAATTGAATGGTTCTCTTGATATGCTCACAAGGTTACCTTTGACAACTCTAAACATTGCAAACAACAATTACAGTGGATGGATACCTCAAGAGCTTATTTCAATCCCCAACTTTATATACGGCGGAAATTCGTTTGCTAACGGTCCTGCCCCACCTCTGCCACCATCTAGCACAACACCTGCAGGAAGACCTCGTAACAATTCAAACCAAGCTGGATCCAGGACACCACCTTCTGATGCTAGTAGTGGCTTGGCAATTGGGGCAATAATAGGCATAATTGGGGGGACTGTGATTGTTTCACTCATTCTTCTAGTTTTGCTCGTCATCTGCATTCGGAAGAATAAAAAGAAGAAAACAGGTCCAAAGACTTCCAGTGGACGTCTCTCTGTTGGGTCGAACAATGTAACTGCTATTGCACAAGAGCAGAGGATGAAGATCGCGGCAGCTGTTGCAGATCTGAAGCCCCCTACTGCAGATAAACTGACTGTGGATAGTTTACATGGGAAAAATGGATCTGTCAAGAGAGTGAAGTCTCCCATTACAGCCACTTCCTACACTGTTGCTTCACTCCAAACAGCCACCAACAGCTTTAGCCAAGAATATCTGATCGGTGAAGGTTCGCTCGGTCGTGTTTACAGAGCTGACTTCCCTAATGGAAAGACTATGGCGATTAAAAAGGTCGACAATGCAGCACTATCACTGCAGGAGGAAGATGATTTTCTCGAAGTCGTCTCGAATATGTCGAGATTGAGGCATCCGAACATTGTCACACTCATAGGATATTGTGCAGAGCATGGACAACGTCTTCTAGTCTATGAATATTTTGGAAATGGTAGTCTTCATGACATGCTTCATTATGCTGAAGATGGCTGTAAGACCCTCACTTGGAATTCTCGCGTTAGAGTCGCCCTCGGCACTGCACGAGCTTTAGAGTATCTTCACGAGGTGTGTTTACCTTGTGTTGTACATAGAAATTTCAAGTCAGCAAACATATTACTTGATGAGGAGCTGAATCCCCACTTGTCAGATTGTGGCATAGCTGCTTTAACACCCAACACTGAGCGGCAATTGTCAACTCAGCTAGTTGGATCCTTTGGTTACAGTGCTCCTGAATTTGCCTTGTCTGGATTATACACCGTCAAAAGCGACGTTTACAGCTTCGGGGTAGTGATGTTAGAGCTCCTCACTGGTCGGAAACCATTGGATAGTTCGAGATCGAGATCAGAACAATCACTTGTGAGATGGGCGACTCCACAGCTTCATGATATAGACGCCTTGGCAAAAATGGTTGATCCTGCACTGAATGGGATGTACCCTGCAAAATCACTTTCCCGATTTGCAGACATTATTGCCCTGTGTGTCCAGCCGGAGCCAGAATTTCGGCCGCCCATGTCCGAAGTAGTTCAGGCATTGGTCCGGTTAGTTCAAAGGGCAAGTGTTATGAAAAGGCATCCCAGCGATGAAGCCGGATTCACATACAAGACCCCAGATCACGACGCAATAGACGCCTCCTTCTAA 2193 45.33 MRLASSDLASGIQLTTAPTVVMAAKLEFRSLSPRARLIGLMFISLISASRYALAITDPSDVQALQALYSSLNSSPELIGWKSSGGDPCAESWKGITCAGSAVVSIEVSGLGLNGTMGYALASLYSLKKLDMSKNSIHDPIPYQLPPNLSSINLAGNNLSGNLPYSFYNMVSLNYMNVSHNSLVQSIGDVFSNLSTLDLSFNNFSGSLPNSFSSLSNLSSLYLENNQLNGSLDMLTRLPLTTLNIANNNYSGWIPQELISIPNFIYGGNSFANGPAPPLPPSSTTPAGRPRNNSNQAGSRTPPSDASSGLAIGAIIGIIGGTVIVSLILLVLLVICIRKNKKKKTGPKTSSGRLSVGSNNVTAIAQEQRMKIAAAVADLKPPTADKLTVDSLHGKNGSVKRVKSPITATSYTVASLQTATNSFSQEYLIGEGSLGRVYRADFPNGKTMAIKKVDNAALSLQEEDDFLEVVSNMSRLRHPNIVTLIGYCAEHGQRLLVYEYFGNGSLHDMLHYAEDGCKTLTWNSRVRVALGTARALEYLHEVCLPCVVHRNFKSANILLDEELNPHLSDCGIAALTPNTERQLSTQLVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLTGRKPLDSSRSRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVMKRHPSDEAGFTYKTPDHDAIDASF 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47377168 47381037 - Bda032703.1 Bda09g01596 13846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01596 730 SUPERFAMILY Protein kinase-like (PK-like) 402 696 IPR011009 -
Bda09g01596 730 ProSiteProfiles Protein kinase domain profile. 422 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01596 730 Gene3D Phosphorylase Kinase; domain 1 384 499 - -
Bda09g01596 730 SUPERFAMILY L domain-like 56 262 - -
Bda09g01596 730 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8-LIKE ISOFORM X1 41 721 - -
Bda09g01596 730 Pfam Leucine rich repeat N-terminal domain 58 97 IPR013210 -
Bda09g01596 730 MobiDBLite consensus disorder prediction 285 305 - -
Bda09g01596 730 MobiDBLite consensus disorder prediction 274 305 - -
Bda09g01596 730 Pfam Protein kinase domain 424 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda09g01596 730 CDD STKc_IRAK 428 699 - -
Bda09g01596 730 Gene3D Ribonuclease Inhibitor 56 276 IPR032675 -
Bda09g01596 730 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 41 721 - -
Bda09g01596 730 Gene3D Transferase(Phosphotransferase) domain 1 501 722 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01596 - - - mnt:21397310 990.334
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00321 Bda-Chr6:5260118 Bda09g01596 Bda-Chr9:47377168 5.92E-38 dispersed
Bda09g01596 Bda-Chr9:47377168 Bda07g01009 Bda-Chr7:11865319 1.02E-155 dispersed
Bda03g01600 Bda-Chr3:55312020 Bda09g01596 Bda-Chr9:47377168 2.19E-106 transposed
Bda02g00925 Bda-Chr2:49467885 Bda09g01596 Bda-Chr9:47377168 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda06g00321 . 24 694 Strubbelig Receptor Gene Family AT4G03390 55.8 5.5e-182 634.8
Bda13g00653 . 21 566 Strubbelig Receptor Gene Family AT4G03390 59.1 4.1e-169 592.0
Bda07g01009 . 17 707 Strubbelig Receptor Gene Family AT4G03390 54.5 2.3e-164 576.2
Bda03g01600 . 3 512 Strubbelig Receptor Gene Family AT5G06820 51.7 1.9e-131 466.8
Bda09g01596 . 407 700 Strubbelig Receptor Gene Family AT1G11130 54.2 5.0e-86 315.8
Bda02g00925 . 353 647 Strubbelig Receptor Gene Family AT1G11130 51.2 1.9e-80 297.4
Bda03g01600 . 3 512 Strubbelig Receptor Gene Family AT5G06820 51.7 1.9e-131 466.8
Bda06g00321 . 24 694 Strubbelig Receptor Gene Family AT4G03390 55.8 5.5e-182 634.8
Bda13g00653 . 21 566 Strubbelig Receptor Gene Family AT4G03390 59.1 4.1e-169 592.0
Bda07g01009 . 17 707 Strubbelig Receptor Gene Family AT4G03390 54.5 2.3e-164 576.2
Bda09g01596 . 50 723 Strubbelig Receptor Gene Family AT1G53730 51.5 1.1e-144 510.8
Bda09g01596 . 226 730 Strubbelig Receptor Gene Family AT4G22130 69.7 2.1e-175 612.5
Bda02g00925 . 136 677 Strubbelig Receptor Gene Family AT4G22130 59.6 1.6e-162 569.7
Bda13g00653 . 255 560 Strubbelig Receptor Gene Family AT4G22130 58.0 7.2e-99 358.2
Bda07g01009 . 431 707 Strubbelig Receptor Gene Family AT4G22130 59.0 4.0e-89 325.9
Bda06g00321 . 429 686 Strubbelig Receptor Gene Family AT4G22130 59.8 1.8e-86 317.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004508 2 2 2 1 0 0 2 0 0 1 1 0 2 1 0 2 0 0 2 0 1 0 0 0 0 1 1 1 0 0 22
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69835 PF00069 Pkinase 8.30E-43 CL0016 Bda PK