Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g01614 GTTGTTTTGGAGAATGACTTGGTCAAGCTAACAATATCGAAACCTCAAGGGTACGTCACTAGCATTAAATATGGAGGAATGGACGTGTTAGATCTCCAGTCAAGCGAATCCGACAGAGGATATTGGGATATAAACTGGAGTTTGCCTGGTGGGAAGGACAGATACCAATTACTTAAGGGACTTGAATACAACGTGGTTCATTCGAGCAATGACCGAATAGAAGTATCATTCCAGACTGTCTATAAACCATCCATGTCAACCAACAAACTGCCACTCAGTGTAGACATAAGATATATTTTGAGGAGTGGTGTTGCAGGCTTCTACAGCTATGCAATTTTCGAACGTCTGCCTCAATGTCCTGCTTTTGATCTTGTGCAGACGAGAATAATTTTTAAGCTTCGACAAGAGAAGTTCCATTACATGGCAATTTCAGACGAGAAGCAGAGAATAATGCCAGTGCCTGAGGATCTAAGGCCGGATAGAGGAAAACAGCTTATTGTTCCTGAATCAGTACTACTGGTGAATCCCACTAATCCTGATCTTAAAGGAGAGGTTGATGATAAATACCAGTATTCAATGGACAACAAAGACGGAGGAGTTCATGGTTGGATCAGCTCTGACCCGATTATAGGATTTTGGGTCATCTTTCCTAGCCATGAGTTCCGGAACGGCGGTCCAACTAAGCAAAATCTTACAGTGCACACGGGTCCATTCTGCCTCGCTATGTTCCATAGCTGTCACTACATTGGAGAAGATATAGTGGCTCATTTTGAAGAGGGAGAGACGTGGAAGAAGGTTTTTGGCCCTATCTTCGTGTACCTTAACTCGACTTCTCATGTATCAGATGCATACAATCTATGGATAGATGCAAAAAAACAGAGGGTGTCCGAGGAGGCTGCATGGCCCTATGATTTTGTGTCTTCCTCATATTATCTTACTGCAAATGAGCGTGGATCCTATATTTTGATTCATACTATGCGTAGGTATATTTCTGGTTCTCTCATTCCAGCCAAGTATGCATATGTTGGTTTGTCAGCTGCCACAAGTGAAGGAACCTGGCAAACAGAAAGCAAGGATTATCAGTTTTGGATACAAACAGACTCCAACGGAAACTTCACCATCAAGAATGTTGTTCCTGGAGTCTATGGGCTGCACGGTTGGGTACCTGGATTCATCGGCGATTACCTCCAAAAATCTCTTGTAACAATCTCTGCAGCAACGCAGATAGAACTTGGCAATTTGATCTATGTTCCGATCAGAGATGGGCCTACTTTGTGGGAGATAGGCTTTCCTGATCGTACGGCAATCGGTTTCTACGTTCCCGACGTGAATCCAATGTACGTTAATAAGCTATTTGTCAACAGCCCTGAAAAGTTCAGACAGTATGGAATGTGGGATAGATATAGTGATATGTATCCTAAGTACGATCTAGTTTTCACCGTAGCCGTCGACGATCCCAAAAAGGACTGGTTCTTTGCCCAAGTTACAGGTTTCATAGGGGAAGCTAACTATCTTCCCTGTACTTGGACCATCAAATTCAACCTCATCTCAGTTTCTGATGGAACCTACAAATTAAGATTGGCGACTGCATCAGTTACCCGCTCGGATCTGCAGATTTACGTGAACGTGATGAACACCGGACACCTGGTTTTCGAGGAGACTAATATAGGGGCCGACAACGCTGTTTGCCGGCATGGAATTCATGGACTGTATCGGCTTTTCAGCGTGGATATTCCTCGGGTGTTGCTGGTCAACGGAGATAACAGCATTTATCTCACACAAGCAAGGGGTGGAGATGCACTCTGTGGGATTCTGTATGATTATTTAAGACTAGAAGCTCCGGCCCCCTCTTAG 1854 44.01 VVLENDLVKLTISKPQGYVTSIKYGGMDVLDLQSSESDRGYWDINWSLPGGKDRYQLLKGLEYNVVHSSNDRIEVSFQTVYKPSMSTNKLPLSVDIRYILRSGVAGFYSYAIFERLPQCPAFDLVQTRIIFKLRQEKFHYMAISDEKQRIMPVPEDLRPDRGKQLIVPESVLLVNPTNPDLKGEVDDKYQYSMDNKDGGVHGWISSDPIIGFWVIFPSHEFRNGGPTKQNLTVHTGPFCLAMFHSCHYIGEDIVAHFEEGETWKKVFGPIFVYLNSTSHVSDAYNLWIDAKKQRVSEEAAWPYDFVSSSYYLTANERGSYILIHTMRRYISGSLIPAKYAYVGLSAATSEGTWQTESKDYQFWIQTDSNGNFTIKNVVPGVYGLHGWVPGFIGDYLQKSLVTISAATQIELGNLIYVPIRDGPTLWEIGFPDRTAIGFYVPDVNPMYVNKLFVNSPEKFRQYGMWDRYSDMYPKYDLVFTVAVDDPKKDWFFAQVTGFIGEANYLPCTWTIKFNLISVSDGTYKLRLATASVTRSDLQIYVNVMNTGHLVFEETNIGADNAVCRHGIHGLYRLFSVDIPRVLLVNGDNSIYLTQARGGDALCGILYDYLRLEAPAPS 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47617239 47620114 + Bda032727.1 Bda09g01614 13864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g01614 617 CDD RGL4_M 335 414 IPR029413 -
Bda09g01614 617 CDD RGL4_C 426 612 - -
Bda09g01614 617 Pfam Rhamnogalacturonate lyase family 1 185 IPR010325 -
Bda09g01614 617 PANTHER POLYSACCHARIDE LYASE FAMILY 4 PROTEIN 4 615 - -
Bda09g01614 617 SUPERFAMILY Galactose-binding domain-like 421 612 IPR008979 -
Bda09g01614 617 Gene3D - 329 411 - -
Bda09g01614 617 Gene3D - 1 285 IPR014718 GO:0030246
Bda09g01614 617 SUPERFAMILY Starch-binding domain-like 358 410 IPR013784 GO:0030246
Bda09g01614 617 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 4 615 - -
Bda09g01614 617 Pfam Polysaccharide lyase family 4, domain III 424 611 IPR029411 -
Bda09g01614 617 SUPERFAMILY Galactose mutarotase-like 4 282 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bda09g01614 617 Pfam Polysaccharide lyase family 4, domain II 339 410 IPR029413 -
Bda09g01614 617 CDD RGL4_N 1 283 - -
Bda09g01614 617 Gene3D - 422 612 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01614 Bda-Chr9:47617239 Bda13g01367 Bda-Chr13:36229677 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g01614 K18195 - pvy:116142949 991.875