Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda09g01616 | ATGTCTTGTTCAAGCCTCACGGTTTGGATGTCTTCCAAACCCAACTCTTGTCTCTCCGACGCCTCCTCCCTCTCCTTCCGCTCTTCTCTCAACCCTTTTCAGTATCCCTCCCACTCCTCCTCCCCCTCCCACTCTTCTCGCTCTTCATCTCTTCTTCCCCCCATTCACTGCGGTCTCCGTGATCTTCGAGATCGAATCGATTCCGTTAAGAATACTCAGAAGATTACTGAGGCCATGAAGCTCGTTGCTGCTGCTAAAGTCCGACGAGCTCAAGAAGCAGTCGTCAACGGACGACCCTTCTCTGAAACTCTCGTCGAAGTTCTTTACAACATCAACGAGCAGCTCCAAACAGACGACGTAAATGTTCCTCTCACCAATGTTAGACCCGTTAAGAAGGTCGCTCTAGTTGTCGTCACCGGAGATCGGGGGCTATGCGGCGGTTTCAATAATTTCATCATCAAAAAGGCTGAAGCCAGGATTGCGGAATTGAAAACTCTTGGCGTTTCCTATACAGTGATTAGCGTGGGCAAGAAGGGCAACTCCTATTTCCTCCGCCGCCCTTATATTCCGGTGGATAGGTTCCTCGAAGGTGGCTCCCTTCCGACCGCTAAAGAAGCACAGGCTATCGCGGACGACGTCTTCTCGCTATTCGTGAGCGAAGAAGTGGACAAGGTGGAGCTTTTGTACACCAAATTCGTGTCCCTGGTAAAGTCGGATCCGGTGATCCACACGCTGCTTCCCCTTTCGCCCAAGGGAGAGATCTGCGACGTGAACGGCGTCTGTGTGGATGCCGCCGAGGATGAGTTCTTCAGGTTAACGACCAAAGAGGGAAAACTGACGGTGGAGAGAGATGTTGTGAGAACAAAAACAGCCGACTTCTCCCCCATTCTACAGTTCGAGCAAGATCCAGTTCAGATACTGGACGCTCTACTCCCTCTCTATTTGAACAGTCAGATTCTAAGGGCGCTGCAAGAATCGTTGGCGAGCGAGCTGGCGGCCAGAATGAGCGCCATGAGCAGTGCATCAGACAACGCGACGGAGTTGAGGAAGACCCTCTCCATCGTATACAACAGACAGCGGCAAGCTAAAATCACGGGGGAGATTTTAGAGATCGTCGCTGGCGCAAACGCTCTAACGTAG | 1140 | 51.93 | MSCSSLTVWMSSKPNSCLSDASSLSFRSSLNPFQYPSHSSSPSHSSRSSSLLPPIHCGLRDLRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVNVPLTNVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIAELKTLGVSYTVISVGKKGNSYFLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTKTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNATELRKTLSIVYNRQRQAKITGEILEIVAGANALT | 379 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47632846 | 47633985 | - | Bda032730.1 | Bda09g01616 | 13866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda09g01616 | 379 | Pfam | ATP synthase | 59 | 378 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | PANTHER | ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC | 1 | 378 | - | - | |
Bda09g01616 | 379 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 1 | 378 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | Gene3D | - | 125 | 249 | - | - | |
Bda09g01616 | 379 | PRINTS | ATP synthase gamma subunit signature | 325 | 344 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | PRINTS | ATP synthase gamma subunit signature | 356 | 377 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | PRINTS | ATP synthase gamma subunit signature | 130 | 149 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | PRINTS | ATP synthase gamma subunit signature | 223 | 240 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 57 | 124 | - | - | |
Bda09g01616 | 379 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 275 | 378 | - | - | |
Bda09g01616 | 379 | ProSitePatterns | ATP synthase gamma subunit signature. | 364 | 377 | IPR023632 | - | |
Bda09g01616 | 379 | CDD | F1-ATPase_gamma | 59 | 375 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | Hamap | ATP synthase gamma chain [atpG]. | 56 | 378 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | TIGRFAM | ATPsyn_F1gamma: ATP synthase F1, gamma subunit | 58 | 378 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Bda09g01616 | 379 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 58 | 378 | IPR035968 | GO:0015986|GO:0045261|GO:0046933 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g01068 | Bda-Chr4:61683753 | Bda09g01616 | Bda-Chr9:47632846 | 5.89E-37 | dispersed | |
Bda09g01616 | Bda-Chr9:47632846 | Bda15g00621 | Bda-Chr15:9382778 | 8.41E-26 | dispersed | |
Bda09g01616 | Bda-Chr9:47632846 | Bda13g00782 | Bda-Chr13:9337359 | 5.17E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda09g01616 | K02115 | - | ming:122058724 | 590.497 |