Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00002 | ATGAGTTGCAATGGCTGCCGTGTTCTTCGAAAGGGTTGCAGTGAGTCCTGTATTCTTCGCCCCTGTTTGCAGTGGATTCCGACTCCCGAGGCTCAGGGCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGTCGCGCTGGTCTCATCTCTTTAATCTCTGCCGTCCCCGAGTCTCAGCGACCTTGTATGCTTCTTTTTAATTTCTTCTCGCTGTTTCAGTCTTTGTTGTTCGAGGCATGTGGACGGACAGTTAATCCTGTGAGCGGAGCTGTGGGGCTCCTCTGGACTGGAAACTGGAACGTCTGCCAGACAGCTGTCGAGACCGTCCTAGGAGGCGGAACGCTGCGCACCATCCCTAATATGGTCGCCGGAGGGTCTCCTGCTCCGCCTTCGGACGAGGATTCCGAGGACGAAGTTGTCTGTACAGACATGTGGAAGCTACAAGAATGGAAACCGAATTCCAGGTTTTCCAATTCGCGATCCAGGCCCTTGATCAAACGCAAACGTACGGATGAAGTGGCGAAGCTTCCACTGACGGATCTAGATCTTCGCCTCACGTCAGGTTTACCGGCGAAAATGTCATGTGAACTCCAGCGGCCGGAAACTCCGTCTAGGAATTCGGAGGAGTCCGTAACCACTTCGTGCATCGAATTGGATTTAGGCGACGGGAAGGGTGATGTGGGAAATGAAAAGCTTCTGAATTTGTTCATCTGA | 714 | 53.08 | MSCNGCRVLRKGCSESCILRPCLQWIPTPEAQGHATVFVAKFFGRAGLISLISAVPESQRPCMLLFNFFSLFQSLLFEACGRTVNPVSGAVGLLWTGNWNVCQTAVETVLGGGTLRTIPNMVAGGSPAPPSDEDSEDEVVCTDMWKLQEWKPNSRFSNSRSRPLIKRKRTDEVAKLPLTDLDLRLTSGLPAKMSCELQRPETPSRNSEESVTTSCIELDLGDGKGDVGNEKLLNLFI | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 51782 | 52556 | - | Bda006418.1 | Bda10g00002 | 13890 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00002 | 237 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 237 | - | - | |
Bda10g00002 | 237 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 108 | IPR004883 | - | |
Bda10g00002 | 237 | ProSiteProfiles | LOB domain profile. | 1 | 115 | IPR004883 | - | |
Bda10g00002 | 237 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN | 1 | 237 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00002 | Bda-Chr10:51782 | Bda11g01472 | Bda-Chr11:21231420 | 2.49E-95 | dispersed | |
Bda10g00002 | Bda-Chr10:51782 | Bda08g01358 | Bda-Chr8:54032646 | 3.80E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16469 | PF03195 | LOB | 2.70E-21 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00002 | - | - | zju:107424931 | 315.079 |