Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00045 ATGTCACCAGCAGTATCTGCAGCAGGTAGCCATGAACAGCCAGAGAAAGCTTATGGATGGGCTGCAAGAGATGTCTCCGGAATTCTTTCCCCTTTCCACTTCCAACGAAGGGCTAATGGCGAAAATGATATCACCATCAACATACTCTACTGTGGAATTTGTTATTCCGATCTTTTTTTCGCCAAGGATAAAGGAAAAATGACCCCCTATCCTCTTGTTCCTGGGCACGAAATAGTAGGAGAAGTGACAAAAGTAGGAAACCAGGTGAGAAAATTCAGAGTGGGAGACAAAGTAGGGGTCGGATGCTTCGTCGGATCTTGCAGAAAATGCGAGAATTGCGCACACGATTTGGAAAATTACTGCCCTGAATCCATTTGGACGATCGTCGGAGTTGATAAAGACGGTCAGAAAAGCTATGGAGGATTCTCCGACAAGATTGTCGTCGACGAGTATTTCGCAGTGACAATTCCAGACGGGGTTTCTTTACCTGGAGCTGCCCCATTGCTTTGCGCAGGAATCACAGTCTATAGCCCCATGAAATTTTACGGCCTGTGTGAATCTGGTCAGCATATCGGCGTGGTAGGGCTCGGAGGGCTAGGTCATCTGGCTGTTAAAATTGGGAAAGCTTTTGGCATGAAGGTCACTGTAATTAGTACTTCTCCTAACAAGAAGAAGGACGCCATGGAAATCCTCGGAGCTGATGCCTTTTTGGTCAGCCACGATCAGAAAGACATGCAAACCGCCGCAAGCTCAATGGATGGAATAATTGACACGGTTTCAGCCCCGCACTCGATCTTGCCATTGCTTGATTTGATGAAACTGAACGGAAAATTGATTCTGCTCGGAGGAATAATCGATCCTCTGGAAATCTCATGTCTACCTCTGATTCAAGGGAGGAAGATAATTGGTGGGAGTTCAGCCGGAGGACTGAAAGAAACGCAGGAGATGATGGAATTCTCGGCGGAACATGGCATCAGCGCCGACGTTGAAGTCATTACGCCGGAATATTTGAACACGGCGATGGAGCGTCTAGAGAAGGGCGACGTTAAATATCGATTTGTGCTCGATGTCGTTAACGCCCTGGAGCCTTAG 1092 47.44 MSPAVSAAGSHEQPEKAYGWAARDVSGILSPFHFQRRANGENDITINILYCGICYSDLFFAKDKGKMTPYPLVPGHEIVGEVTKVGNQVRKFRVGDKVGVGCFVGSCRKCENCAHDLENYCPESIWTIVGVDKDGQKSYGGFSDKIVVDEYFAVTIPDGVSLPGAAPLLCAGITVYSPMKFYGLCESGQHIGVVGLGGLGHLAVKIGKAFGMKVTVISTSPNKKKDAMEILGADAFLVSHDQKDMQTAASSMDGIIDTVSAPHSILPLLDLMKLNGKLILLGGIIDPLEISCLPLIQGRKIIGGSSAGGLKETQEMMEFSAEHGISADVEVITPEYLNTAMERLEKGDVKYRFVLDVVNALEP 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 962492 963830 + Bda006474.1 Bda10g00045 13933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00045 363 Gene3D - 20 357 - -
Bda10g00045 363 Pfam Alcohol dehydrogenase GroES-like domain 42 154 IPR013154 -
Bda10g00045 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Bda10g00045 363 PANTHER ALDEHYDE REDUCTASE 8 362 - -
Bda10g00045 363 Gene3D - 171 327 - -
Bda10g00045 363 PANTHER - 8 362 - -
Bda10g00045 363 SUPERFAMILY GroES-like 12 203 IPR011032 -
Bda10g00045 363 SMART PKS_ER_names_mod 27 355 IPR020843 GO:0016491
Bda10g00045 363 Pfam Zinc-binding dehydrogenase 198 321 IPR013149 -
Bda10g00045 363 CDD CAD1 19 356 - -
Bda10g00045 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 161 325 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00045 Bda-Chr10:962492 Bda14g01320 Bda-Chr14:14817228 1.06E-146 dispersed
Bda10g00045 Bda-Chr10:962492 Bda11g01550 Bda-Chr11:48202965 1.18E-143 wgd
Bda10g00045 Bda-Chr10:962492 Bda14g01315 Bda-Chr14:14727293 9.12E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00045 - K23232 pavi:110772154 468.774