Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00103 CTTCCAAGTTCTCCCAAACACTTCAACATGTCAGCCATGGAGAACTGTCCAGTAGAAGTTCATGACGTTGAGATGACAACTAGCCATGCTGAAAGGGCTGAAAGGGCTGAATGGGTAATGAATCCACCCAAGCCTCCAGGTCTCTGCAGCGAGCTGATGAATTCTCTCCGGGAAACCATTTTACCGCATCCGAACAAGCTCTCTTTTCGATCACAGACAGGAAAAAGATCCGCCGCCTCTGTGCTCGGAGAAATATTTCCCATTCTCTGCTGCTGCCAAAATTACAATTTGGCTAAATTCAAGAAGGATTTGCTGGCAGGTTTAACTCTTGCAAGCCTTTGTATTCCTCAGAGTATTGGGTATGCATCATTAGCAAAGCTTGATCCTCAATATGGCCTGTGTAAGATGTCAGTCCCACCGCTTATTTACGCTATCATGGGGACTTCGGGGGAAATATCAATCGGTCCGGTTGCTGTTGTTTCTCTACTTTTAGCCTCCATGACCCAGAAATTACAAGACCCTTTGGCTGATCCACTCGCTTATAGAAAGCTTATTTTGACATGGAATCCCTACAATTTCATCCTCGGCTGTGCGTTCTTCTGCTTTATCCAGATCACTAGATTTCTGAAGATTGTCAATGAATGGGTTATCCTCGTTGAAGTACCTCTAACAGATTGTTATGTTCTACAGGGTACCAAATACAAGAAACTCCTCTGGTTGCAAGCCCTTTCTCCTCTGTTATCTGTAATTTTGTCCACCATCATTGTTTTCCTGACAAGGGCAGATAAGTATGGAGTTACAATTGTGAGACACATACCAAAAGGCTTGAATCCAGTTTCAGTTCATCAGTTAGAGCTTAACAGTCCTTACACTGGAGAGATTGCCAAGATAGGATTCATTTCTGCCATAGTTGCCCTCACTGAAGCAATTGCAGTAGGAAGATCGTTTGCGTCCATAAAAGGATATCACCTTGATGCAAACAAAGAACTGGTTGCTGCAGGCTTCATGAACATTGCAGGATCTTTTACTTCTTGCTATGTAGCAACTGGGTCTTTTTCAAGAACTGCAGTAAATTTCAGTGCTGGGTGTGAAACAGTGGTATCAAACATAGTGATGGCCATAGCAGTGCTCATATCATTGGAACTATTCACTCAACTCTTGTACTTTACTCCAACTGCAATTCTAGCTTCCATTATCCTCTCTGCTCTTCCTGGCCTCGTCAACCTTCATGAAGCTCATCACATATGGAGGGTTGATAAGCTAGACTTCTTTGCCTGCATGGGGGCTTTCCTAGGAGTCTTGCTTGTATCAGTAGAGATTGGCTTACTAACCTCAGTGATGATATCTTTTCTGAAGATAATACTTATATCCATTCGATCCGGAACAGAAACTCTTGGAAGAATCAATGGAACCGATATGTTCTGTGACATTAATCAATATCCTATGGCTGTAAGGACACCAGGAGTTCTTGTAATCCGTCCAAAGTCTTCCTTCCTTTGCTTTGCTAATGCTAATTCCTTCAGAGAAAAGTACCTCTCTCTCTCTCTCTAG 1551 42.94 LPSSPKHFNMSAMENCPVEVHDVEMTTSHAERAERAEWVMNPPKPPGLCSELMNSLRETILPHPNKLSFRSQTGKRSAASVLGEIFPILCCCQNYNLAKFKKDLLAGLTLASLCIPQSIGYASLAKLDPQYGLCKMSVPPLIYAIMGTSGEISIGPVAVVSLLLASMTQKLQDPLADPLAYRKLILTWNPYNFILGCAFFCFIQITRFLKIVNEWVILVEVPLTDCYVLQGTKYKKLLWLQALSPLLSVILSTIIVFLTRADKYGVTIVRHIPKGLNPVSVHQLELNSPYTGEIAKIGFISAIVALTEAIAVGRSFASIKGYHLDANKELVAAGFMNIAGSFTSCYVATGSFSRTAVNFSAGCETVVSNIVMAIAVLISLELFTQLLYFTPTAILASIILSALPGLVNLHEAHHIWRVDKLDFFACMGAFLGVLLVSVEIGLLTSVMISFLKIILISIRSGTETLGRINGTDMFCDINQYPMAVRTPGVLVIRPKSSFLCFANANSFREKYLSLSL 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2537503 2540762 + Bda006560.3 Bda10g00103 13991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00103 516 PANTHER SULFATE TRANSPORTER 187 512 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda10g00103 516 Pfam Sulfate permease family 185 427 IPR011547 GO:0016021
Bda10g00103 516 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 24 187 - -
Bda10g00103 516 Gene3D STAS domain 461 515 IPR036513 -
Bda10g00103 516 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 187 512 - -
Bda10g00103 516 PANTHER SULFATE TRANSPORTER 24 187 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00103 Bda-Chr10:2537503 Bda10g01195 Bda-Chr10:45942382 2.58E-114 dispersed
Bda10g00103 Bda-Chr10:2537503 Bda03g00872 Bda-Chr3:7564021 4.78E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00103 K17469 - mnt:21399657 441.039