Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00125 ATGGTAGTGAAAGAAACCTTCAGGCTTCATCCAGTAGCGCCATTGTTGGTGCCTCACATGTCGACGGAAGACTGCGTCGTTAGTGGCTTCCACATCCCTCGAAACTCCACCCTCCTCGTCAACGTGTTCGCAATCGGTAGAGATCCAGAAGTTTGGACAGACCCGGAGAAGTTCGACCCGGAGAGATTCGCAGGCAGGGAAATAGACGTGAGGGGAAGGGACTTTCAGCTCATTCCTTTTGGATCGGGTCGACGGAGCTGCCCCGGAATGCAACTGGGCTTGATCGTGGTTCGTCTAGTATTGGCCCAGCTCGTTCACTGCTTCGATTGGGAGCTTCCAGCCGGAAGTTCGCCAGCCGATTTGGACATGACCGAGGTGTATAGCCTTGTTTGGCCGCGGGCGAAGCATTTGGTTGCGATCCCGTCATGCCGCCTTCGCAATCGTCACAATCACAATATATAG 462 54.33 MVVKETFRLHPVAPLLVPHMSTEDCVVSGFHIPRNSTLLVNVFAIGRDPEVWTDPEKFDPERFAGREIDVRGRDFQLIPFGSGRRSCPGMQLGLIVVRLVLAQLVHCFDWELPAGSSPADLDMTEVYSLVWPRAKHLVAIPSCRLRNRHNHNI 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3453135 3453596 - Bda006584.1 Bda10g00125 14013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00125 153 Pfam Cytochrome P450 1 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS E-class P450 group I signature 87 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS E-class P450 group I signature 77 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS E-class P450 group I signature 41 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 SUPERFAMILY Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS P450 superfamily signature 1 12 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00125 153 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Bda10g00125 153 PANTHER CYTOCHROME P450 93A3-LIKE 1 146 - -
Bda10g00125 153 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00125 Bda-Chr10:3453135 Bda04g00067 Bda-Chr4:1148303 3.25E-89 dispersed
Bda10g00117 Bda-Chr10:2833848 Bda10g00125 Bda-Chr10:3453135 1.69E-107 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00125 K20562 - mnt:21403008 235.728