Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00129 ATGGTTTCTTCTCCCGAGACTGCTCCGTCGCCCGACTCCTCTTCTTCACAGGAATCTCCTCCGCCGCCGCCTAGTGAGTCTGCCGAATCACCCCCTCCTCAATCTTCTACGCCTCCGCCACCTTCAGCCAAATCACCTCCTCCACCGCCAGAAAATGACTCCGACTACTCTTCTCCGCCTGCACCACCGCCGCCTCCTCCTCCTTATACTTCTTCCTCCAAATCATTATCTCCTCCCCCTCCACCCCCTCGGACATCTGCGTCATCTACATCAAGTCAATCACCGTCTTCAAATCAAAACCTACCAGTTATAATTGGTGTAGCAGCTGGAGTAGGTCTTTTGGTAATCGCAATGCTTATAATCTGCGTAATGTGTTCGAGGAAAAAAAGAAAGCCAGATAAAATGCAATATTACAGAGACTCCGGCGAAGGTGGCAAGAATGGCAATTATTACAACAATTCAATGCAACAAAACTGGAATGGAAGCGATCATTTCGCGAGGCTTACATCTCCGCCTGGTGCGAGCGGGTCATTGGGAGGCCCGTGGCCGGCACCTCCCCCGCCTCCGCCGATGGGATTTAGCGGCGAAACCAGCTCAAATTACTCAGGCCCAAGGCAAATGCCTCTCCCGCCACCGTCTCCGAACCTCGCGCTAGGGTTCAACAAGAGCACGTTCACCTACGACGAGCTGGCGGCGGCGACCGGTGGATTTGCGCAGGTGAATCTGCTTGGGCAAGGTGGATTTGGGTTTGTTCATAAGGGTGTTCTTCCCAATGGGAAAGAAATCGCTGTGAAGAGTCTGAAATCTGGGAGTGGACAAGGGGAGCGAGAATTTCAGGCGGAAGTTGAAATCATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCCGGTGGACAGCGCATGCTGGTTTACGAATTTGTGCCCAACAAGACCTTGGAACATCACCTCCATGCAAAGAATCTTGCCACCATGGACTTGCCCACCAGGCTTCGTGTTGCCATTGGATCTGCCAAAGGGCTTGCCTATCTTCACGAAGACTGCCATCCTCGGATTATACATCGTGACATAAAATCTGCAAATATTCTCCTCGACTACAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCTAAGCTTTCTTCCGATAATTACACTCACGTCTCTACAAGAATCATGGGCACCTTCGGATATCTGGCTCCGGAATATGCGTCGAGTGGGAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTGTTGGAGCTCATAACTGGAAAAAGACCAGTAGATCCAACTAATGCAATGGAGGATAGCTTAGTGGACTGGGCTCGACCTCTTTTGAGCCGGGCGCTCGAGGAAGGGAACTTTGCCGAGCTAGTCGATATTCGCTTAGAAAATAACTTTAACCCTCAAGAGATGGCTAGAATGGTTGCTTGTGCTGCAGCTAGCATTCGTCATTCTGCCCGAAAGCGCCCACGAATGAGCCAGATCGTAAGAGCATTAGAAGGAGATGTGTCATTGGACGACTTGAAAGACGGGGGTGGGAGGCTAGGAGAGAGCTCGACGTTCAGCTCAAACATAAGCTCATCGGAGTACGACACAAGGGCGTATAACGCGGACATGGCAAAGTTTAGGCAGATGGCGCTATCAAGCCAGGAGTTTGGGAGCAGTGAGCTTGGGACTTCCAGCAGTGACTCCGGCAACCAAAAACAGTACTATTGA 1746 50.57 MVSSPETAPSPDSSSSQESPPPPPSESAESPPPQSSTPPPPSAKSPPPPPENDSDYSSPPAPPPPPPPYTSSSKSLSPPPPPPRTSASSTSSQSPSSNQNLPVIIGVAAGVGLLVIAMLIICVMCSRKKRKPDKMQYYRDSGEGGKNGNYYNNSMQQNWNGSDHFARLTSPPGASGSLGGPWPAPPPPPPMGFSGETSSNYSGPRQMPLPPPSPNLALGFNKSTFTYDELAAATGGFAQVNLLGQGGFGFVHKGVLPNGKEIAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHAKNLATMDLPTRLRVAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDYNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTNAMEDSLVDWARPLLSRALEEGNFAELVDIRLENNFNPQEMARMVACAAASIRHSARKRPRMSQIVRALEGDVSLDDLKDGGGRLGESSTFSSNISSSEYDTRAYNADMAKFRQMALSSQEFGSSELGTSSSDSGNQKQYY 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3557155 3559706 + Bda006588.1 Bda10g00129 14017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00129 581 MobiDBLite consensus disorder prediction 161 212 - -
Bda10g00129 581 MobiDBLite consensus disorder prediction 178 193 - -
Bda10g00129 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Bda10g00129 581 SUPERFAMILY Protein kinase-like (PK-like) 212 509 IPR011009 -
Bda10g00129 581 SMART serkin_6 237 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00129 581 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 568 - -
Bda10g00129 581 Gene3D Phosphorylase Kinase; domain 1 215 312 - -
Bda10g00129 581 MobiDBLite consensus disorder prediction 15 86 - -
Bda10g00129 581 MobiDBLite consensus disorder prediction 1 98 - -
Bda10g00129 581 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Bda10g00129 581 ProSiteProfiles Protein kinase domain profile. 237 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00129 581 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 568 - -
Bda10g00129 581 MobiDBLite consensus disorder prediction 562 581 - -
Bda10g00129 581 Gene3D Transferase(Phosphotransferase) domain 1 313 519 - -
Bda10g00129 581 Pfam Protein tyrosine and serine/threonine kinase 241 509 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00055 Bda10g00129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02061 Bda-Chr1:56840481 Bda10g00129 Bda-Chr10:3557155 0 dispersed
Bda08g00923 Bda-Chr8:16984613 Bda10g00129 Bda-Chr10:3557155 0 dispersed
Bda10g00129 Bda-Chr10:3557155 Bda11g01113 Bda-Chr11:11007129 0 dispersed
Bda10g00129 Bda-Chr10:3557155 Bda04g00055 Bda-Chr4:890864 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69842 PF07714 PK_Tyr_Ser-Thr 2.80E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00129 - - rcu:8273399 709.138