Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00146 ATGGAGCGAAGGGCAACGGCCATCTCTTCAATGGCCGGCGCCGCCGGAAACCCTAGTCGATGGCGGTTCATCTGGGAAGCTCAGTCCTACGTTCCGACCCTCCGTTTACTACTTTTCGATCCGGAAACTAATCCGTACATTCAATGTCTGGATCTCGAGGTTAATTTGGATCTCCCGCGATCGTTTCTTACTGTGAGCTGGTTTCAAGACCAGAGAGTTTCTCTTAGGGTTCCGATTCCCCGAGTTTTGGTTGATGATGAGTCTCCTCTGAGCTGCAGAGCTTTTGATGATCATATTGAGGTGAAGGTTGTCTTGGTTCTTCCTGTTGATCATCCTATTGTTCTGAATTTCGAATCCGTACTGGACGTTTCTGAAGACACGGAAAGTGAAAGCTCTGATGCGTCAAAGTCTTTCTTTAAGGAATCTGATAAAGACAATCTATCATCTAGTGGAGGCGCTGACTTTTATTGCAGGAGCTGCTTGTTCAGGTTGACTAAAAATCCAATTAGAGATTTCTTGGAAATGCCATCTGTCAATTGGCGAGAGATAGCTGATAACTGGTTTGACGCATGCTGCTGTTCTTTTGGTGGCATCAGTGAGAAAATGGTACTCAGTTATGCAAATGCCTACGCGTGCAAAAGGGGTCTCTGCTTCCTATCCCCAGCAACTATAACTTTTTTCAAGGATGACCTTGTTGAATACATATCCTCAGTCTGTGATGGACTTGAAATGTTAAAGCTAGAGCCAGGTGTCACTTGCGAAAATGAGCTTCCTAAAGCTAAGCATGATTCAAAAAATACTTTTCTGTATGTGGAGGATCCAACCTCTAAACAAGGTTATGGTAAAGACATTGCAGCATACTCTGAGTGTGGTGGAGATGAAAGTGGCAATGATGGTGTACATCATTTAGCTTCCCCATCTGGATTTTCTGATTGTAGTGATAGTTCAGTTTCCGATCATATTAATCATGATTGCACACATGATTTATGTGAAAGTTCTCGAAACAACCAAAACTGTACAAAAATTATAAATATGCAGGCTGAACGCAAGCCATTTCTTGATGGGTTTCTTGGGAATATATTCATGGTTCGATCTTCCAATCTCAGGGAAGATATTGAATGGATTGAGTATTTATGCCCACAATGTTCATCTCTCCTTGGAGCTTACCCTTGCAGTACTAATCAGGAACCTGTAGATGGTGGAATTCGAATTTTTAAGTGTTATGTCTCAACTTCTTTGCCAGTTAATGGACCTGGTGACTTCTTCAGGAATTATACGTTGGAAAGAATGTTTGCAGTTCAGCTTTTGGAAAGTGCAACAGAAGAATCATCATTTCGTACTGTGGTGAAGGATCTGAAAACAAAATCTTCCATGCTGCACATTGTCGTTGTAAATATAAATTCTTGGTCCTCTAGTGGTTATTGTTTGGGTATGGAGGGCACAACAGCATTGTTTCAGAACATTGATTTACATCCAATCATCAAAGTTCTATTCTCTGACTGCAGGGAAGGTGCAGAATCTCAATTAAGCAGAACCTTGGAAGATTCAGTTGCAAAAGATTTAGCTGATGAAGTTTTCATGTTTAAGCATCAAATTGAAGAACTGATAGAAGCCTTGACATTGAGAAAGGCCATGAGTCCTCCTTCATGCTCTTCCCTTGAGGGTTTATGTTTTTCATCAATCTCAAGATGA 1692 41.37 MERRATAISSMAGAAGNPSRWRFIWEAQSYVPTLRLLLFDPETNPYIQCLDLEVNLDLPRSFLTVSWFQDQRVSLRVPIPRVLVDDESPLSCRAFDDHIEVKVVLVLPVDHPIVLNFESVLDVSEDTESESSDASKSFFKESDKDNLSSSGGADFYCRSCLFRLTKNPIRDFLEMPSVNWREIADNWFDACCCSFGGISEKMVLSYANAYACKRGLCFLSPATITFFKDDLVEYISSVCDGLEMLKLEPGVTCENELPKAKHDSKNTFLYVEDPTSKQGYGKDIAAYSECGGDESGNDGVHHLASPSGFSDCSDSSVSDHINHDCTHDLCESSRNNQNCTKIINMQAERKPFLDGFLGNIFMVRSSNLREDIEWIEYLCPQCSSLLGAYPCSTNQEPVDGGIRIFKCYVSTSLPVNGPGDFFRNYTLERMFAVQLLESATEESSFRTVVKDLKTKSSMLHIVVVNINSWSSSGYCLGMEGTTALFQNIDLHPIIKVLFSDCREGAESQLSRTLEDSVAKDLADEVFMFKHQIEELIEALTLRKAMSPPSCSSLEGLCFSSISR 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4358976 4361592 + Bda006616.1 Bda10g00146 14034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00146 563 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 14 561 IPR019193 -
Bda10g00146 563 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 114 551 IPR019193 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00146 Bda11g01853 CCT
Bda10g00146 Bda11g01853 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00146 Bda-Chr10:4358976 Bda10g00157 Bda-Chr10:4545634 8.21E-170 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00146 - - csv:101204887 563.148