Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00176 ATGTTGAGGTTGATGGCTTTTCTTCTGCTTTTCGTGCTGCTATGCTCTCCCATTTCTGTTTTGGCCGACCAGAGTTTTGAGGCCCAAGCTGAGATTGAGGCTCTTATGGCTTTTAAATTGAATCTTTACGATCCCGTAGGTGCTTTGACGGGGTGGGATCCGACGTCTCCGGCCGCGCCCTGCGACTGGCATGGGATTTTTTGCGCTGGAAGCCGAGTTACTGAGGTCCGTTTGCCTCGGTTACAACTGGAGGGCCGACTTAGCGACGAGCTCGGTAATCTTAGGATGTTGCAAAACCTTAGTCTTCGTTCCAACTCCTTTAACGGCTCCATTCCGTCTTCTCTCTCTAAATGCACGCTGCTGCAGGCGGTGTTCCTGCAGCACAACTCGTTTTCCGGTATTCTGCCGTCGCAGATCCAAAACCTTACCCGTCTTGAAATCTTCAATGTGGCGCAGAACCATCTTTCCGGTGGGATTCCAAAAGACCTCCCTCGGACTGTCAAGTACATAGATCTTTCATCGAATATGTTCTCGGGTGAGATTCCGAGAAGTATTGCTAACTTAACTCAGCTTCAGCTTATTAACTTCTCTTTTAACCAGTTTAGCGGACAGATTCCGGCGAGCCTAGGTTGGCTTCAAGAGCTTCAATATCTTTGGCTGGATGGTAACATTTTCAAAGGTACTCTACCTTCTGCAATTGCCAATTGTTCGTCGCTCGTTCATTTGAGCGTTGATGGCAATGGACTCGAAGGTGTAATTCCGGCAGCCATTGGAGCTCTTCCCAATCTTCAAGTTCTGTCTCTTTCGCAAAATATGTTATCTGGACGTATCCCATTCTCTATTTTCTGCAATGTCTCGGTACATCCGCCATCACTCCGCATCGTTCAGCTTGGGTTTAATGCGTTTACGAAGATTGATGAGCCGGAGATAGCACTGTGTTATAGTGTTCTGCAGGTTCTTTATCTTCAACATAATCAATTACGAGGGCCCTTCCCATCGTCTTTAACACGTATATCAACTTTAACTCATCTAGACGTTTCGGATAATTTCTTCTCTGGAACTGTTCCACCCGAAACTGGGAACTTCTTGAGATTGGTGGAGCTTAAAATGGCGAATAATTTATTCGAGGGAGAGATTCCAGAAGAAATAAAAAAATGTAGCTCCCTGACTGTTCTTGATTTTGAAGGAAATCGCTTTGCTGGAGAGATTCCGGCGTTCTTTGGGGAAATGAGAGGCTTGAATGTGCTGATTCTGGGGAGAAACCAGTTTGTGGGAGCCATTCCAGAGAGCTTTCGCAATCTCTTGGAGCTTAAAAGCTTGGATTTGGGAGGAAATGGTTTGAGTGGGTGCTTTCCCCAGGTTTTAATGGGGTTGAAAAATCTGACCTTTATCGATCTCAGCAGGAACAATTTGAGCTGTGAAATTCCTTCAGGCATTGGGAATCTAACTAGGCTGGTAAATCTGAATCTAAGTGCAAATGGCTTTTCCGGGGAGATTCCGGCCAGCTTGGGAAACCTTTTCTTGTTAACTACTCTTGATTTGAGCAGACAGAAATTTTCGGGTAAGTTGCCATTCGAGCTTTTCGGGCTGCCAAATGCGCAGGTAATAGCTCTCCAGGAGAACATGTTATCTGGCGATGTTTCTGAAGGATTCAGTAGTTTGATGAGTCTGCGCAGTTTGAATCTCAGTTCAAATCACTTTTCTGGTCCCATTCCCGCTTATTATGGGTTTCTCGCATCACTGACTGTTCTCTCGTTGTCCGGTAATCACATAACGGGGACGATTCCACCAGAGCTGGGCAACTGCTCAAGCCTCCAAGTTTTTGAGGCTCGATTCAACTCGTTGACTGGAAACATTCCGGAGAATCTCTCGCAGCTATCTCGTTTAAAGGAGCTTGATTTGGGTCATAATAATTTGACAGGAGAAATTCCAGATGAAATTTCCAGGTGCTTGTCATTAAACACTCTGCTCCTGGACTCAAATGATCTATCAGGTACCATTCCAAGCTCCTTGTCCAAGCTTTCAAACCTCACAACGTTAGACCTCTCTTTTAACAATTTGAGTGGAGAAATTCCTGCTAATATTAGCTCCATTACTGGATTGGTGAACTTTAATGTCGCAAATAATGATCTTGAAGGTGAGATTCCCGCGCCTTTAGGTTCTCGATTTGATAATTCATTATTATTTGCGGGAAATTCAAAGTTATGTGGGAAGCCGTTGGACCGAAAATGTGATAAAAAGGATAGAAGAAAGAAGCTCATTCTGTTAATTGCAGTAGCTGCTAGTGGAGCTATCCTACTGTCAGTGTGTTGCTGCTTTTACATTTTTAGTCTCGTTATTTGGTGGAAGAGGCTGAAAGAGGGGCTGTATGGGGAGAAGAAGAGGAGCCCCGGAAGGACCAGCATCGGAGCTAGTAGTGGGCGTGGAAGCACAGACAGTGATGGACCGAAAGTTCTCATGTTCGTTAACAAAATCACGCTTGCAGACACAATTGAAGCGACTCGGCATTTCGATGAAGAGAATGTTCTTAGTAGAACTCGATATGGGCTGGTTTTCAAAGCTAGCTACAACGATGGAATGGTGCTCTCGATTCGCCGTCTCCCAAATGGGTCTCTGAGCGAAAATGTGATCAGAAAAGAAGCCGAATTATTGGGTAAAGTGAAGCATCGAAATCTAACTGTTCTTCGCGGATACTATGCAGGGCCGGATTTGAAACTTCTCGTCTATGACTACATGCCGAATGGAAATCTTGCAACTCTTCTTCAAGAAGCCTCCCACCAAGATGGTCATGTTCTGAATTGGCCGATGCGACACCTTATCGCCCTTGGAATTGCTCGCGGTCTGGCTTTCCTCCACTCGTCCTCCATTGTCCACGGCGATGTTAAGCCGCAAAACGTTCTGTTCGATGCTGATTTCGAGGCCCATTTGTCTGATTTTGGGCTAGATAGGCTTATGGTTGCAGCTCCGGCCGAAGCATCTTCTTCCACCTCGGTTGGCACATTGGGCTATGTTTCTCCTGAATTAGCCCTTACAGGGGAACCGACAAAGGAATCGGATGTCTACAGCTTTGGAATCGTCTTGCTTGAGCTGTTGACAGGGAAAAGACCAGTGATGTTTGGAGAAGATGAAGATATCGTGAAGTGGGTGAAGAAACAACTGCAAAGTGGTCAGATCAATGAGCTTTTGGAGCCCGGGTTGCTTGAGCTAGACCCTGAATCATCAGAGTGGGAGGAGTTTTTGCTAGGCGTCAAAGTTGGGTTGCTTTGTACTGCACCAGAGCCTCTTGATAGGCCGACCATGACCGATATAGTTTTCATGCTGGAAGGTTGCCGTGTTGGACCTGAAATTCCGTCCACTGCCGAACCAACCAATCAACCTTCTCCGACATGA 3390 45.96 MLRLMAFLLLFVLLCSPISVLADQSFEAQAEIEALMAFKLNLYDPVGALTGWDPTSPAAPCDWHGIFCAGSRVTEVRLPRLQLEGRLSDELGNLRMLQNLSLRSNSFNGSIPSSLSKCTLLQAVFLQHNSFSGILPSQIQNLTRLEIFNVAQNHLSGGIPKDLPRTVKYIDLSSNMFSGEIPRSIANLTQLQLINFSFNQFSGQIPASLGWLQELQYLWLDGNIFKGTLPSAIANCSSLVHLSVDGNGLEGVIPAAIGALPNLQVLSLSQNMLSGRIPFSIFCNVSVHPPSLRIVQLGFNAFTKIDEPEIALCYSVLQVLYLQHNQLRGPFPSSLTRISTLTHLDVSDNFFSGTVPPETGNFLRLVELKMANNLFEGEIPEEIKKCSSLTVLDFEGNRFAGEIPAFFGEMRGLNVLILGRNQFVGAIPESFRNLLELKSLDLGGNGLSGCFPQVLMGLKNLTFIDLSRNNLSCEIPSGIGNLTRLVNLNLSANGFSGEIPASLGNLFLLTTLDLSRQKFSGKLPFELFGLPNAQVIALQENMLSGDVSEGFSSLMSLRSLNLSSNHFSGPIPAYYGFLASLTVLSLSGNHITGTIPPELGNCSSLQVFEARFNSLTGNIPENLSQLSRLKELDLGHNNLTGEIPDEISRCLSLNTLLLDSNDLSGTIPSSLSKLSNLTTLDLSFNNLSGEIPANISSITGLVNFNVANNDLEGEIPAPLGSRFDNSLLFAGNSKLCGKPLDRKCDKKDRRKKLILLIAVAASGAILLSVCCCFYIFSLVIWWKRLKEGLYGEKKRSPGRTSIGASSGRGSTDSDGPKVLMFVNKITLADTIEATRHFDEENVLSRTRYGLVFKASYNDGMVLSIRRLPNGSLSENVIRKEAELLGKVKHRNLTVLRGYYAGPDLKLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIVHGDVKPQNVLFDADFEAHLSDFGLDRLMVAAPAEASSSTSVGTLGYVSPELALTGEPTKESDVYSFGIVLLELLTGKRPVMFGEDEDIVKWVKKQLQSGQINELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPEPLDRPTMTDIVFMLEGCRVGPEIPSTAEPTNQPSPT 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5499092 5502481 - Bda006665.1 Bda10g00176 14064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00176 1129 Gene3D Ribonuclease Inhibitor 253 355 IPR032675 -
Bda10g00176 1129 Gene3D Ribonuclease Inhibitor 356 456 IPR032675 -
Bda10g00176 1129 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Bda10g00176 1129 ProSiteProfiles Leucine-rich repeat profile. 628 650 IPR001611 GO:0005515
Bda10g00176 1129 Pfam Leucine Rich repeat 674 690 IPR001611 GO:0005515
Bda10g00176 1129 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1125 - -
Bda10g00176 1129 Gene3D Transferase(Phosphotransferase) domain 1 912 1116 - -
Bda10g00176 1129 Gene3D Phosphorylase Kinase; domain 1 810 911 - -
Bda10g00176 1129 SMART LRR_sd22_2 260 287 - -
Bda10g00176 1129 SMART LRR_sd22_2 314 343 - -
Bda10g00176 1129 SMART LRR_sd22_2 458 490 - -
Bda10g00176 1129 SMART LRR_sd22_2 626 649 - -
Bda10g00176 1129 SMART LRR_sd22_2 434 449 - -
Bda10g00176 1129 SMART LRR_sd22_2 674 697 - -
Bda10g00176 1129 Gene3D Ribonuclease Inhibitor 457 753 IPR032675 -
Bda10g00176 1129 Pfam Leucine Rich Repeat 628 650 IPR001611 GO:0005515
Bda10g00176 1129 SMART serkin_6 837 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00176 1129 SUPERFAMILY RNI-like 474 720 - -
Bda10g00176 1129 Gene3D Ribonuclease Inhibitor 166 252 IPR032675 -
Bda10g00176 1129 SUPERFAMILY L domain-like 30 305 - -
Bda10g00176 1129 MobiDBLite consensus disorder prediction 793 812 - -
Bda10g00176 1129 SMART LRR_typ_2 260 284 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 674 698 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 188 212 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 410 433 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 626 650 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 578 602 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 458 482 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 434 457 IPR003591 -
Bda10g00176 1129 SMART LRR_typ_2 94 118 IPR003591 -
Bda10g00176 1129 SUPERFAMILY Protein kinase-like (PK-like) 817 1118 IPR011009 -
Bda10g00176 1129 Gene3D Ribonuclease Inhibitor 27 165 IPR032675 -
Bda10g00176 1129 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 5 1125 - -
Bda10g00176 1129 ProSiteProfiles Protein kinase domain profile. 837 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00176 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Bda10g00176 1129 SUPERFAMILY L domain-like 281 546 - -
Bda10g00176 1129 Pfam Protein kinase domain 847 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00176 1129 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515
Bda10g00176 1129 PRINTS Leucine-rich repeat signature 674 687 - -
Bda10g00176 1129 PRINTS Leucine-rich repeat signature 629 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00176 Bda-Chr10:5499092 Bda03g01111 Bda-Chr3:11359984 6.75E-157 dispersed
Bda14g00224 Bda-Chr14:1519843 Bda10g00176 Bda-Chr10:5499092 3.52E-41 dispersed
Bda01g01179 Bda-Chr1:47001911 Bda10g00176 Bda-Chr10:5499092 4.42E-25 transposed
Bda01g01522 Bda-Chr1:51130670 Bda10g00176 Bda-Chr10:5499092 4.30E-07 transposed
Bda04g00818 Bda-Chr4:58056396 Bda10g00176 Bda-Chr10:5499092 2.00E-09 transposed
Bda04g00820 Bda-Chr4:58069971 Bda10g00176 Bda-Chr10:5499092 2.04E-20 transposed
Bda12g00472 Bda-Chr12:5923442 Bda10g00176 Bda-Chr10:5499092 1.06E-33 transposed
Bda10g00176 Bda-Chr10:5499092 Bda04g00029 Bda-Chr4:447626 8.68E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69843 PF00069 Pkinase 7.50E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00176 - - mnt:21409357 1551.95