Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00247 ATGAGTAATACGATGGAAACTTCGTTGGGTGATTTACCATCTGAATCAAGTGCCAAAACATCTGCTGATAAAAATTTGACTTCTGATTTTTCATCACAAGATAATGCTGGCAGTCACTTAGCATCAAAGTTTTCTGCTTCTGGTGTATCATCTTGGGCTAGTAGTTTCAAATTTCCTCAGCAATTTGGAGGAGAAGCAGCGCATCCAAAAGAAGGAAATGCCATGATGTCGACATTCGCACTTTTCACTGGTGGTTTTGGTTTGGGTGCTCCTTCAGCCACTTCAGAGCCAAATAAGGACAGTGCTGCAACAACTGCACAATATGGTGTGGTGGAGTCGCTTACAAAAGGAATAGTTGACTCATCTCGTAGTGCTGTAAAAGCAGTGCAGGTCAAGGCTCGACATATTGTTTCTCAGAATAAACGAAGATATCAGGAGGGAGGTTTTGATTTAGATATGACTTATATCACCGAGAATGTTATTGCTATGGGATTCCCTGCTGGTGACATAAGCTCTGGGTTTTTCGGATATCTTGAGGGTTTTTATCGAAATCACATGGAAGAAGTGATCAAATTCTTTGAATCACACCACCAGGGAAAGTACAAAGTATATAATCTTTGTTCAGAGCGGTTGTATGATGTCTCATTGTTTGAAGGGAAGGTTGCGAATTTCCCATTTGATGATCATAACTGCCCACCTTTACATCTTATAAAATCATTTTGTCAAAGTGCATATTCATGGCTAAAGGGTGACATTGAGAATGTTGTGGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGCTTAATGATTTGTAGCCTTCTCTTGTTCATCAAGATGTTCCCAAGGGGAGAGGAAGCAATTAATTATTTCAACCAGAAGAGATGTATTGATGGAAGGGCTTTGGTTCTCCCTAGTCAGATTAGGTATGTCAAATATTTTGAAAGCACTTTAACGTCTTCAAATGGAGAAAATCATCAAGGACGTAGGTGCATGCTTCGTGGTTTTCGGATTTACAAATGCCCTAATTGGCTTAGACCTTCCATTACAATTTCTGATCACAAAGGAGTTTTATTCTCAACTAGGAAACATCTGAAAACTAAGGATCTAATGCCAGAAGATTTCTGGCTTCGTGCAACAAAGAAAGGATTTGTGGTGTTTGCACTACCTGGAGAGCCTGGTCTGACAGAAGTGGTTGGGGACTTCAAAATCCATTTTCAGGACCGACAGGGAGATTTCTACTGTTGGTTAAATACCGCAATGATTGAAAACAGAATTTTTTTGAATGCCAAAGAGCTGGACGGTTTTGAGAAGAGAAATATTTCTATTCCTGGGTTCCAATTTGAAGTTGTGATGATTGACTATGACGGGATAACATCAAAGTCTGTACCTGCTTCTTCTGGCAAACCCTCTAATAGTAGCTCTGCTACTAGTCAAGCTTCGATTAATGAAGTTTCAGCTCAAGCATCAAAGAGCAAAGAAGACACTGATGATGTGTTTTCTGATAGCGATGGAGAAGACATTAAGCCAACAAATAGTGTATCGGCCAGACCTGCTCAGAAGTTCATTATGTCAGAGCAAATAGCAACTTTAGGGGATTCTTCTGCTCAACTATCACTGAACACGGAGACCTGTGCTTCAAAAGAACTTAATGATGGAGATTTGAGACCTTCCACGGGCATGGAAACTCAACGCCAAGAGCAGAGTGATTTCAAGGCCATATCGGCTGATGTCTCAGTTTTCAGTTTTGGAGACGAAGATGATTTAGAAAGCGACTGA 1779 40.53 MSNTMETSLGDLPSESSAKTSADKNLTSDFSSQDNAGSHLASKFSASGVSSWASSFKFPQQFGGEAAHPKEGNAMMSTFALFTGGFGLGAPSATSEPNKDSAATTAQYGVVESLTKGIVDSSRSAVKAVQVKARHIVSQNKRRYQEGGFDLDMTYITENVIAMGFPAGDISSGFFGYLEGFYRNHMEEVIKFFESHHQGKYKVYNLCSERLYDVSLFEGKVANFPFDDHNCPPLHLIKSFCQSAYSWLKGDIENVVVVHCKAGMGRTGLMICSLLLFIKMFPRGEEAINYFNQKRCIDGRALVLPSQIRYVKYFESTLTSSNGENHQGRRCMLRGFRIYKCPNWLRPSITISDHKGVLFSTRKHLKTKDLMPEDFWLRATKKGFVVFALPGEPGLTEVVGDFKIHFQDRQGDFYCWLNTAMIENRIFLNAKELDGFEKRNISIPGFQFEVVMIDYDGITSKSVPASSGKPSNSSSATSQASINEVSAQASKSKEDTDDVFSDSDGEDIKPTNSVSARPAQKFIMSEQIATLGDSSAQLSLNTETCASKELNDGDLRPSTGMETQRQEQSDFKAISADVSVFSFGDEDDLESD 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24282876 24295203 + Bda006917.1 Bda10g00247 14135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00247 592 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 13 592 - -
Bda10g00247 592 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 13 592 - -
Bda10g00247 592 MobiDBLite consensus disorder prediction 544 569 - -
Bda10g00247 592 ProSitePatterns Tyrosine specific protein phosphatases active site. 258 268 IPR016130 GO:0016311|GO:0016791
Bda10g00247 592 ProSiteProfiles Phosphatase tensin-type domain profile. 142 321 IPR029023 -
Bda10g00247 592 MobiDBLite consensus disorder prediction 1 38 - -
Bda10g00247 592 MobiDBLite consensus disorder prediction 462 489 - -
Bda10g00247 592 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 238 295 IPR000387 GO:0016311|GO:0016791
Bda10g00247 592 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 149 318 IPR029021 -
Bda10g00247 592 ProSiteProfiles C2 tensin-type domain profile. 328 455 IPR014020 -
Bda10g00247 592 SMART PTEN_C2_2 326 454 IPR014020 -
Bda10g00247 592 MobiDBLite consensus disorder prediction 462 517 - -
Bda10g00247 592 Gene3D Protein tyrosine phosphatase superfamily 127 324 IPR029021 -
Bda10g00247 592 CDD PTP_PTEN 152 315 IPR045101 GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00214 Bda-Chr10:7589104 Bda10g00247 Bda-Chr10:24282876 0 dispersed
Bda10g00247 Bda-Chr10:24282876 Bda15g00847 Bda-Chr15:13141380 0 dispersed
Bda10g00247 Bda-Chr10:24282876 Bda14g01451 Bda-Chr14:19537856 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00247 K01110 - qsu:112030067 722.235