Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00247 | ATGAGTAATACGATGGAAACTTCGTTGGGTGATTTACCATCTGAATCAAGTGCCAAAACATCTGCTGATAAAAATTTGACTTCTGATTTTTCATCACAAGATAATGCTGGCAGTCACTTAGCATCAAAGTTTTCTGCTTCTGGTGTATCATCTTGGGCTAGTAGTTTCAAATTTCCTCAGCAATTTGGAGGAGAAGCAGCGCATCCAAAAGAAGGAAATGCCATGATGTCGACATTCGCACTTTTCACTGGTGGTTTTGGTTTGGGTGCTCCTTCAGCCACTTCAGAGCCAAATAAGGACAGTGCTGCAACAACTGCACAATATGGTGTGGTGGAGTCGCTTACAAAAGGAATAGTTGACTCATCTCGTAGTGCTGTAAAAGCAGTGCAGGTCAAGGCTCGACATATTGTTTCTCAGAATAAACGAAGATATCAGGAGGGAGGTTTTGATTTAGATATGACTTATATCACCGAGAATGTTATTGCTATGGGATTCCCTGCTGGTGACATAAGCTCTGGGTTTTTCGGATATCTTGAGGGTTTTTATCGAAATCACATGGAAGAAGTGATCAAATTCTTTGAATCACACCACCAGGGAAAGTACAAAGTATATAATCTTTGTTCAGAGCGGTTGTATGATGTCTCATTGTTTGAAGGGAAGGTTGCGAATTTCCCATTTGATGATCATAACTGCCCACCTTTACATCTTATAAAATCATTTTGTCAAAGTGCATATTCATGGCTAAAGGGTGACATTGAGAATGTTGTGGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGCTTAATGATTTGTAGCCTTCTCTTGTTCATCAAGATGTTCCCAAGGGGAGAGGAAGCAATTAATTATTTCAACCAGAAGAGATGTATTGATGGAAGGGCTTTGGTTCTCCCTAGTCAGATTAGGTATGTCAAATATTTTGAAAGCACTTTAACGTCTTCAAATGGAGAAAATCATCAAGGACGTAGGTGCATGCTTCGTGGTTTTCGGATTTACAAATGCCCTAATTGGCTTAGACCTTCCATTACAATTTCTGATCACAAAGGAGTTTTATTCTCAACTAGGAAACATCTGAAAACTAAGGATCTAATGCCAGAAGATTTCTGGCTTCGTGCAACAAAGAAAGGATTTGTGGTGTTTGCACTACCTGGAGAGCCTGGTCTGACAGAAGTGGTTGGGGACTTCAAAATCCATTTTCAGGACCGACAGGGAGATTTCTACTGTTGGTTAAATACCGCAATGATTGAAAACAGAATTTTTTTGAATGCCAAAGAGCTGGACGGTTTTGAGAAGAGAAATATTTCTATTCCTGGGTTCCAATTTGAAGTTGTGATGATTGACTATGACGGGATAACATCAAAGTCTGTACCTGCTTCTTCTGGCAAACCCTCTAATAGTAGCTCTGCTACTAGTCAAGCTTCGATTAATGAAGTTTCAGCTCAAGCATCAAAGAGCAAAGAAGACACTGATGATGTGTTTTCTGATAGCGATGGAGAAGACATTAAGCCAACAAATAGTGTATCGGCCAGACCTGCTCAGAAGTTCATTATGTCAGAGCAAATAGCAACTTTAGGGGATTCTTCTGCTCAACTATCACTGAACACGGAGACCTGTGCTTCAAAAGAACTTAATGATGGAGATTTGAGACCTTCCACGGGCATGGAAACTCAACGCCAAGAGCAGAGTGATTTCAAGGCCATATCGGCTGATGTCTCAGTTTTCAGTTTTGGAGACGAAGATGATTTAGAAAGCGACTGA | 1779 | 40.53 | MSNTMETSLGDLPSESSAKTSADKNLTSDFSSQDNAGSHLASKFSASGVSSWASSFKFPQQFGGEAAHPKEGNAMMSTFALFTGGFGLGAPSATSEPNKDSAATTAQYGVVESLTKGIVDSSRSAVKAVQVKARHIVSQNKRRYQEGGFDLDMTYITENVIAMGFPAGDISSGFFGYLEGFYRNHMEEVIKFFESHHQGKYKVYNLCSERLYDVSLFEGKVANFPFDDHNCPPLHLIKSFCQSAYSWLKGDIENVVVVHCKAGMGRTGLMICSLLLFIKMFPRGEEAINYFNQKRCIDGRALVLPSQIRYVKYFESTLTSSNGENHQGRRCMLRGFRIYKCPNWLRPSITISDHKGVLFSTRKHLKTKDLMPEDFWLRATKKGFVVFALPGEPGLTEVVGDFKIHFQDRQGDFYCWLNTAMIENRIFLNAKELDGFEKRNISIPGFQFEVVMIDYDGITSKSVPASSGKPSNSSSATSQASINEVSAQASKSKEDTDDVFSDSDGEDIKPTNSVSARPAQKFIMSEQIATLGDSSAQLSLNTETCASKELNDGDLRPSTGMETQRQEQSDFKAISADVSVFSFGDEDDLESD | 592 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 24282876 | 24295203 | + | Bda006917.1 | Bda10g00247 | 14135 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00247 | 592 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 13 | 592 | - | - | |
Bda10g00247 | 592 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 13 | 592 | - | - | |
Bda10g00247 | 592 | MobiDBLite | consensus disorder prediction | 544 | 569 | - | - | |
Bda10g00247 | 592 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 258 | 268 | IPR016130 | GO:0016311|GO:0016791 | |
Bda10g00247 | 592 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 142 | 321 | IPR029023 | - | |
Bda10g00247 | 592 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bda10g00247 | 592 | MobiDBLite | consensus disorder prediction | 462 | 489 | - | - | |
Bda10g00247 | 592 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 238 | 295 | IPR000387 | GO:0016311|GO:0016791 | |
Bda10g00247 | 592 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 149 | 318 | IPR029021 | - | |
Bda10g00247 | 592 | ProSiteProfiles | C2 tensin-type domain profile. | 328 | 455 | IPR014020 | - | |
Bda10g00247 | 592 | SMART | PTEN_C2_2 | 326 | 454 | IPR014020 | - | |
Bda10g00247 | 592 | MobiDBLite | consensus disorder prediction | 462 | 517 | - | - | |
Bda10g00247 | 592 | Gene3D | Protein tyrosine phosphatase superfamily | 127 | 324 | IPR029021 | - | |
Bda10g00247 | 592 | CDD | PTP_PTEN | 152 | 315 | IPR045101 | GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00214 | Bda-Chr10:7589104 | Bda10g00247 | Bda-Chr10:24282876 | 0 | dispersed | |
Bda10g00247 | Bda-Chr10:24282876 | Bda15g00847 | Bda-Chr15:13141380 | 0 | dispersed | |
Bda10g00247 | Bda-Chr10:24282876 | Bda14g01451 | Bda-Chr14:19537856 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00247 | K01110 | - | qsu:112030067 | 722.235 |