Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00275 | ATGGAGAACCAGGGATCTGCAGTTGGTAGAGCACGAAGGGATGCTGCTGCACGTGCTATGCAGGGCTGGCACTCACAACGTCTTCTTGGCAATGGTGAAGTTAGTGACCCTGTTATGAAGGATAAGAATTCTCTCTCTGTGCAAAAGCGTGAAAAACAGCTCAAAAACATTGGTGTATTCAAACGTAAGAAATCACCGTATGTGGAGCACGATGTTAAAGCTGTGCGTAGTAAAACATCAAAACCTCAAACGGATACAACAGTAATAGATATTGGACTTCCAGCTGAATGGGTGAAGATCAATGTACAGAAAACTAAAGATTGTTATGAGGTCTATGCTTTAGTTCCAGGACTTCTGCGAGAGGAGGTCCGTGTTCAATCAGATCCAGCAGGAAGACTTGTTATTAGTGGTGAACCTGAGCATCCTGACAATCCATGGGGTGTCACACCCTTCAAGAAGGTGGTTAGCCTACCTTCAAGGATCGATCCGCATCAGACATCTGCAGTTGTGACCTTGCACGGACAGTTGTTTGTTCGAGTCCCATTTGAGCAGTCAGAGTGA | 561 | 45.45 | MENQGSAVGRARRDAAARAMQGWHSQRLLGNGEVSDPVMKDKNSLSVQKREKQLKNIGVFKRKKSPYVEHDVKAVRSKTSKPQTDTTVIDIGLPAEWVKINVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE | 186 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 30342155 | 30345148 | + | Bda007006.1 | Bda10g00275 | 14163 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00275 | 186 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE | 3 | 185 | - | - | |
Bda10g00275 | 186 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 86 | 186 | IPR002068 | - | |
Bda10g00275 | 186 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Bda10g00275 | 186 | Gene3D | - | 73 | 186 | IPR008978 | - | |
Bda10g00275 | 186 | CDD | ACD_sHsps-like | 101 | 181 | - | - | |
Bda10g00275 | 186 | Pfam | Hsp20/alpha crystallin family | 103 | 185 | IPR002068 | - | |
Bda10g00275 | 186 | SUPERFAMILY | HSP20-like chaperones | 94 | 182 | IPR008978 | - | |
Bda10g00275 | 186 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT | 3 | 185 | IPR045147 | GO:0006357 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01577 | Bda-Chr1:51590827 | Bda10g00275 | Bda-Chr10:30342155 | 1.56E-73 | dispersed | |
Bda10g00275 | Bda-Chr10:30342155 | Bda04g00200 | Bda-Chr4:7331564 | 1.67E-113 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00275 | - | - | qsu:112032164 | 322.783 |