Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00338 ATGGCGGCACTGGAAATCCTCTTGCCTTTCTTCTCCTTCGCTTTCATCCTTCTTCTTCGCTGCATACTCGACATCCGTGGCCTTCCTTGGAACTGGCCCTTGATCGGAATGCTTCCGACCGTCTTCCTCCATATACGGCGGATTCATGACCGCTGCACTGAAATCCTCGAGAGATCGGGGGCCACCTTCCTCTTCAAAGCCATCTGGTCCTCCGGAATGGACATTTTAATCACCGCCGACCCGGCCAACATCCACCACGTCTTGAGCACAAACTTCCAGAATTATCCCAAGGGGGAAGAATTCAAGTTCATTTTCGATATTTTGGGAGATGGGATTTTCAATTCTGATTCAGATTCTTGGATAAACCAGAGAAATACGGCGAGAGCTTTGCTGGGTAGGAAGAAGTTTCAAGTATTTTTGGCGAGAACGACGAAGAAGAAGGTGGAGGAAGGGCTTTTCACTGTTCTTGATATTATGAGCCAAAATGGCAAATTTTTTGATCTTCAAGATCTGTTTCAGAGGTTTTCTTTCGATAGCACCTGCATATTTGTCACTGGGTTCGACCCAAAAAGTCTCTCCGTCGAACTACCAGAAATTCGTTTCGCGACCGCCATGGATGAAGTTGAGGAGCTTCTTTTTTCCAAACACTTTATTCCGAAACCCCTGTGGAAATTACAGTTAAAATTAAGGTTTGGTCAGGCTAAGAAAATGACGAAAGCTAGGGAAGTCATCGACGAAACTATAGCCCAACTCATAACCATGAAGAGAGAACAGCTAAAGAAAAAGCCCCATTTGAAAAACGAAAACGAAGACAAAGATTCTGATCTGATAACATCGTACATGACCGGAGAAGAAGGAGAACCCGCCATTAAAGGAGGCGACGAGTTTCTGAGAGACACAACTTTGAATCTCATGATTGCAGGGAGAGACACAATAAGCACGGCTCTCTCGTGGTTTTTCTATCTGATTGCGACCAACCCATCAGCAAAAAACAAGATTAGAGAAGAAATAAACCAGACAATCACAGAAGAAGAAGAGAAGAAGAGTGGAAACAAAGCGTTTACCATTGAAGAACTTGAGAACTTGGTGTACTTGCACTCAGCTCTGTGCGAGTCTCTCAGGCTCTACCCACCAGTTCCGTTCGAACACAAAGCTCCGATCGAACGAGATGTTCTTCCAAGCGGCCATCACGTCACACCAGACATTAAGATTTTGTTCTCGCTTTACGCATTGGGGAGGTTAAAGTCAGTATGGGGAGAAGACAGCGTGGAATTTAGGCCGGAGAGATGGATTTCAGAGAAATCGGGGAAGGTGAAGCACGAGCCGTCGTACAAGTTCATGGCTTTCAACGCCGGGCCGAGGACGTGCCTCGGTAAGCAGGTGGCGTTTACTCAACTAAAAATGGTGGCAGCTTCTATTCTCCACAATTATGAGATTGAGCTTCTGAAAGGGCATCCAGTGACTCCAAGTGCTTCTATCATTCTTAACATGAAGCATGGGATGAAAGTTAGGGTCACAAAGAGATACATGGGATGA 1536 45.64 MAALEILLPFFSFAFILLLRCILDIRGLPWNWPLIGMLPTVFLHIRRIHDRCTEILERSGATFLFKAIWSSGMDILITADPANIHHVLSTNFQNYPKGEEFKFIFDILGDGIFNSDSDSWINQRNTARALLGRKKFQVFLARTTKKKVEEGLFTVLDIMSQNGKFFDLQDLFQRFSFDSTCIFVTGFDPKSLSVELPEIRFATAMDEVEELLFSKHFIPKPLWKLQLKLRFGQAKKMTKAREVIDETIAQLITMKREQLKKKPHLKNENEDKDSDLITSYMTGEEGEPAIKGGDEFLRDTTLNLMIAGRDTISTALSWFFYLIATNPSAKNKIREEINQTITEEEEKKSGNKAFTIEELENLVYLHSALCESLRLYPPVPFEHKAPIERDVLPSGHHVTPDIKILFSLYALGRLKSVWGEDSVEFRPERWISEKSGKVKHEPSYKFMAFNAGPRTCLGKQVAFTQLKMVAASILHNYEIELLKGHPVTPSASIILNMKHGMKVRVTKRYMG 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33830976 33832847 + Bda007132.1 Bda10g00338 14226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00338 511 PANTHER ALKANE HYDROXYLASE MAH1-LIKE 18 508 - -
Bda10g00338 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 Gene3D Cytochrome P450 26 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Bda10g00338 511 SUPERFAMILY Cytochrome P450 28 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda10g00338 511 ProSiteProfiles PUA domain profile. 487 510 - -
Bda10g00338 511 PANTHER CYTOCHROME P450 18 508 - -
Bda10g00338 511 Pfam Cytochrome P450 29 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00333 Bda-Chr10:33640525 Bda10g00338 Bda-Chr10:33830976 0 dispersed
Bda10g00338 Bda-Chr10:33830976 Bda12g00137 Bda-Chr12:1234751 3.03E-122 dispersed
Bda10g00337 Bda-Chr10:33795326 Bda10g00338 Bda-Chr10:33830976 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00338 - - csv:101218649 601.282