Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00344 ATGAAACCCTCTCCCACCTATACTCAGTTCTCTCTCATCGTCCTATTCTTCCTCAACTTTCTCTCACTAGAAGCTTCATCGTCACCTTCAAGAGATGCCCAGCAGCTGATCAACTTCAAAACCTCACTTCCCAACCCGTCTCTGCTTCAGAACTGGCTCTCCAACGGCGACCCGTGTTTTTTCTCTCACATTTCCTGCAAACAATCCAGAGTTTCCGCTATAGACCTAAGCTTCATCCCCTTAAGCTCGAATATCAGCTCCGTCTTCTCTACCCTTTTCACACTCGACCACTTAGAATCCATCTCGTTGAAATCTACTAATCTTACAGGCACCATTTACGTACCTTCTGGATCCAAGTGCAGCTCTATGTTGACGGCCATAGATCTATCTCAGAACAGCTTGTCTGGCCCCATTTCAGACGCTTCTAACCTGGGTTCTTGCTCAAATGTGAAGACTCTAAATCTGTCGTCCAATTTCTTTGATTTTACAGTGAAGGATGCTGCCGGATTGAAGCTCGATTTGCAGGTTCTCGATTTTTCTTTCAATAAAATCGCGGGTTCAAACGTGATGCCTTGGATTTTATCCGCTGGTTGCGGCGAAATGCAACACTTGGCGATAAAGGGTAACAAAATCGGCGGTGCAATTAATTTCGAATCTTGCAAGAATTTGGAGTACTTGGATATCTCTTCCAATAATTTCTCCGGGATTATTCCTTCCTTCGGAGATTGCTCCTTTTTGGAACACCTTGACATCTCCGGCAACAAGTTTTCCGGCGACGTTGGAGGAGTTCTCTCTGGTTGTAACCAGCTCAGCTTCCTTGATCTCTCCTCCAACCAGCTTTCCGGACAAATCCCGGCGTTTTCTTCTCGGGCCTTAAGGTTTCTCTCGCTTTCCAGCAACCATTTCCAAGGCCAGATTCCGCCGCATCTTTCTGATTCCTGCTCTAGTTTGATAGAGCTGGACCTCTCGATGAATAACTTATCCGGCGGAGTTCCTTCGGCTCTGAGCTCTTGTTCTTCTCTTCAGTTTTTTGATATTTCGAGTAATAATTTGTCTGGTGAACTACCCATTTCTGCTTTCACTTCCATGGTTAGCTTGAAGGTGCTTTCTCTGTCCGACAATAAATTTTCCGGCGACCTGCCGGATTCTCTTTCTAATCTCACCAGCTTGGAGACTTTGGATCTGAGTTCGAATAATTTTTCTGGGTTGATTCCATCAATGCTTTGCCAAATCTCCGGCAACAACTTGAAGGAGCTGTTTCTTCAAAATAATCTGTTAATGGGTTCCATTCCAGCGACTCTGAGCAACTGTTCTCAGCTCGTTTCCCTCGATTTGAGTTTCAATTTTCTCACCGGAGTTATCCCGTCGAGCATAGGCTATCTCTATAAGCTCCGGAATCTGATTATTTGGGAGATTAATTTGTCTAATAATCTCTTGAACGGAACCATACCAGAATCCGGCCAGTTTGAAACCTTTCCAGCGACTGGGTTTTTGAACAATTCCGGCCTCTGTGGGTACCCTTTACCTAAATGCGGGGCTGATTCAGACTCAAGCTTGGATTCTCAACACGAGAAGTCCCACCGGAGACAATCTTCACTTGCCGGAAGTGTGGCAATGGGGTTATTATTTTCACTTTTCTGCATATTTGGATTGCTCATAGTTGCCATAGAAACTCGGAAGAGAAGGAAGAAGAAGGATTCGACCCTCGATATTTACGTGGACAGCCATTCGCATTCAGGTGCCGCAAATACGAGCTGGAAGTTCACCAGCACCATAGAAGCATTAAGCATAAATCTAGCTACTTTCGAGAAACCCTTACGGAAGCTCACATTTGCAGACCTTCTCGAGGCCACTAATGGCTTCCACAACGACAGTCTCGTTGGGTCGGGTGGATTTGGGGATGTCTACAAAGCTCAGTTGAAGGATGGAAGTGTTGTGGCCATAAAAAAACTGATCCATATAAGTGGGCAGGGGGATAGAGAATTCACTGCTGAAATGGAAACGATCGGAATAATCAAGCACAGAAATCTTGTCCCCCTCCTTGGATATTGCAAGGTCGGCGAAGAACGCCTTCTGGTTTATGAGTTCATGAAATTTGGAAGCTTAGAAGATGTATTACACGACCGGAAGAAGTCGGGAATGAAGCTGAATTGGGCTGTGAGGAGGAAGATAGCCATTGGAGCTGCCAGAGGACTGGCATTTCTCCACCACAGTGTCAATCCCCACATAATTCATCGCGATATGAAGTCGAGCAACGTTCTGCTCGACGAAAACTTGGAAGCTCGGGTCTCTGACTTCGGAATGGCGAGGCTGATGAGTGCAATGGACACCCATTTGAGTGTCAGCACCCTCGCCGGAACTCCTGGCTATGTCCCACCAGAGTATTACCAGAGCTTCCGGTGCTCCACGAAAGGCGATGTTTATAGCTACGGAGTCGTTCTGCTGGAGCTTCTCACCGGAAAACGACCGACCGACTCGATAGATTTTGGTGATAACAATCTCGTTGGGTGGGTGAAAATGCACGCAAAATTGAAAATAAGTGACGTGTTTGATCCGGAGCTCATGAGAGAGGAACCGAGCCTCGAAATCGAGCTCTTGCAGCATTTGAAGGTGGCATGTGCTTGCCTGGACGACCGGCCGTGGAGGCGGCCGACAATGATTCAGGTGATGGCTATGTTTAAGGAAATTCAGGCAGGGCCGGGGATCGATTCTCAGTTGAATATTGCCTCTGGCCACAGAGGATTTAGTGGGGTCGATGGGGTGGAAATGAGTATAAAAGAAGCCCCAGAACTCAGCAAGCAGTAG 2805 46.81 MKPSPTYTQFSLIVLFFLNFLSLEASSSPSRDAQQLINFKTSLPNPSLLQNWLSNGDPCFFSHISCKQSRVSAIDLSFIPLSSNISSVFSTLFTLDHLESISLKSTNLTGTIYVPSGSKCSSMLTAIDLSQNSLSGPISDASNLGSCSNVKTLNLSSNFFDFTVKDAAGLKLDLQVLDFSFNKIAGSNVMPWILSAGCGEMQHLAIKGNKIGGAINFESCKNLEYLDISSNNFSGIIPSFGDCSFLEHLDISGNKFSGDVGGVLSGCNQLSFLDLSSNQLSGQIPAFSSRALRFLSLSSNHFQGQIPPHLSDSCSSLIELDLSMNNLSGGVPSALSSCSSLQFFDISSNNLSGELPISAFTSMVSLKVLSLSDNKFSGDLPDSLSNLTSLETLDLSSNNFSGLIPSMLCQISGNNLKELFLQNNLLMGSIPATLSNCSQLVSLDLSFNFLTGVIPSSIGYLYKLRNLIIWEINLSNNLLNGTIPESGQFETFPATGFLNNSGLCGYPLPKCGADSDSSLDSQHEKSHRRQSSLAGSVAMGLLFSLFCIFGLLIVAIETRKRRKKKDSTLDIYVDSHSHSGAANTSWKFTSTIEALSINLATFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGIIKHRNLVPLLGYCKVGEERLLVYEFMKFGSLEDVLHDRKKSGMKLNWAVRRKIAIGAARGLAFLHHSVNPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSIDFGDNNLVGWVKMHAKLKISDVFDPELMREEPSLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGPGIDSQLNIASGHRGFSGVDGVEMSIKEAPELSKQ 934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34019536 34023107 - Bda007141.1 Bda10g00344 14232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00344 934 ProSiteProfiles Leucine-rich repeat profile. 389 410 IPR001611 GO:0005515
Bda10g00344 934 PANTHER SYSTEMIN RECEPTOR SR160 471 908 - -
Bda10g00344 934 PANTHER SYSTEMIN RECEPTOR SR160 10 470 - -
Bda10g00344 934 CDD STKc_IRAK 627 896 - -
Bda10g00344 934 SMART serkin_6 621 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00344 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Bda10g00344 934 SUPERFAMILY L domain-like 195 495 - -
Bda10g00344 934 Gene3D Transferase(Phosphotransferase) domain 1 697 898 - -
Bda10g00344 934 SUPERFAMILY RNI-like 12 281 - -
Bda10g00344 934 Pfam Leucine Rich Repeat 440 459 IPR001611 GO:0005515
Bda10g00344 934 Gene3D Ribonuclease Inhibitor 472 511 IPR032675 -
Bda10g00344 934 Gene3D Ribonuclease Inhibitor 36 471 IPR032675 -
Bda10g00344 934 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bda10g00344 934 Pfam Protein kinase domain 621 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00344 934 PRINTS Leucine-rich repeat signature 270 283 - -
Bda10g00344 934 PRINTS Leucine-rich repeat signature 387 400 - -
Bda10g00344 934 Gene3D Phosphorylase Kinase; domain 1 582 696 - -
Bda10g00344 934 ProSitePatterns Protein kinases ATP-binding region signature. 627 650 IPR017441 GO:0005524
Bda10g00344 934 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 471 908 - -
Bda10g00344 934 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 470 - -
Bda10g00344 934 Pfam Leucine rich repeat 291 351 IPR001611 GO:0005515
Bda10g00344 934 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Bda10g00344 934 Pfam Leucine rich repeat 355 400 IPR001611 GO:0005515
Bda10g00344 934 ProSiteProfiles Protein kinase domain profile. 621 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00344 934 SUPERFAMILY Protein kinase-like (PK-like) 602 893 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00845 Bda-Chr1:40600956 Bda10g00344 Bda-Chr10:34019536 6.25E-11 dispersed
Bda04g00364 Bda-Chr4:49930326 Bda10g00344 Bda-Chr10:34019536 0 dispersed
Bda06g00167 Bda-Chr6:2377946 Bda10g00344 Bda-Chr10:34019536 4.47E-08 dispersed
Bda10g00344 Bda-Chr10:34019536 Bda11g00199 Bda-Chr11:2542397 0 dispersed
Bda14g00553 Bda-Chr14:4052803 Bda10g00344 Bda-Chr10:34019536 5.64E-17 dispersed
Bda15g00008 Bda-Chr15:1126668 Bda10g00344 Bda-Chr10:34019536 1.60E-73 dispersed
Bda10g00344 Bda-Chr10:34019536 Bda14g01625 Bda-Chr14:41485244 2.59E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69847 PF00069 Pkinase 1.40E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00344 K13415 - zju:107425559 954.896