Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00352 TACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATTGATGAGGTGCTACAGTCTCCAGATGACTTGGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCATTGAAGCATAACAACATTGTGAGGTTCTACAATTCATGGATTGATGATAAGAACAAAACCGTTAATATCATTACTGAGTTGTTTACTTCTGGAAGCCTCAGACAGTATTGTAAAAAACACAAAAAGGTTGACATGAAGGCAGTGAAGGGATGGGCAAGACAAATTTTGATGGGTTTGAACTACCTTCATAGTCATAACCCACCAATTATACACAGGGATCTGAAGTGTGATAACATATTTATCAACGGTAATCAAGGAGAAGTAAAGATTGGAGATCTTGGATTTGCAACCATTATGCAGCAATCAACTGCTAAAAGTGTAATTGGTACTCCCGAGTTCATGGCTCCTGAACTTTATGATGAAAATTACGATGAATTAGCTGATATATATTCTTTTGGGATGTGCATGCTCGAGATGGTGACTTTTGAATATCCTTACAGTGAGTGTCGGAACTCCGCTCAAATATACAAGAAGGTCACTTCGGGTATAAAGCCTGCTGCTCTCTGTAAAGTGAAAGATCCAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCTACTGAAAGATTTTCTGCGAAAGAACTTCTAATGGATCCTTTTCTCCAAGCGAATGGATCAGCAAAGTATCGTCCTCTGCCACTCCCAGATATTGTTTTTCCTAAATTTGGAACGTTTGGAGATCGTTGTTTGATGTCAGAAGGACCTGCCAGTGCACGAAATGCACCAATTTCCATGGACGTAAATAACGATGGTGAGCCACCCATTATCACTTCTTTTGATACTTCAGTTGATGGGGAGTCCCATTCTCTGTATGTGGAGGTTAAAAGAACACAGAGGGGGAGTGTCTTCTTATTGAAAGGCGAGCAAAATGATGAGAATTCTCTTTCTCTGATACTTCAGATAGCAGATCAAAATGGTCGTGCTAGGAATATCCATTTTATATTCTACCTCGAAAGTGATACGGCTCTCTCTCTTTCAAGTGAAATGGTGGAACAACTGGAACTACCTGACCAAAATGTTATGCTCATAGCAGAATTGATTGACTTGTTACTTGTAAACTTAGTTCCCAGCTGGAAACCTTGTGTTCGCATAGACCATTTGATGGCTGCAAATGGAACGAGACTTCCTATTGGTCATAAAAAAGATGTGCCGTTGCCAAAACAAAATGAAGAAAATATAGTTGAGATCTCGACAAAAGGCTTATGA 1332 39.26 YKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNIVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKKVDMKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGFATIMQQSTAKSVIGTPEFMAPELYDENYDELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALCKVKDPDMKQFIEKCLVPATERFSAKELLMDPFLQANGSAKYRPLPLPDIVFPKFGTFGDRCLMSEGPASARNAPISMDVNNDGEPPIITSFDTSVDGESHSLYVEVKRTQRGSVFLLKGEQNDENSLSLILQIADQNGRARNIHFIFYLESDTALSLSSEMVEQLELPDQNVMLIAELIDLLLVNLVPSWKPCVRIDHLMAANGTRLPIGHKKDVPLPKQNEENIVEISTKGL 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34257425 34259249 + Bda007154.1 Bda10g00352 14240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00352 443 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Bda10g00352 443 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00352 443 CDD STKc_WNK 1 243 - -
Bda10g00352 443 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 433 - -
Bda10g00352 443 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Bda10g00352 443 Pfam Protein kinase domain 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00352 443 Gene3D Transferase(Phosphotransferase) domain 1 69 251 - -
Bda10g00352 443 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 433 - -
Bda10g00352 443 SMART serkin_6 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00352 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00335 Bda10g00352 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00335 Bda-Chr4:48341510 Bda10g00352 Bda-Chr10:34257425 0 dispersed
Bda04g00336 Bda-Chr4:48369600 Bda10g00352 Bda-Chr10:34257425 0 dispersed
Bda10g00352 Bda-Chr10:34257425 Bda11g01305 Bda-Chr11:14078103 1.10E-177 dispersed
Bda10g00352 Bda-Chr10:34257425 Bda10g00353 Bda-Chr10:34281854 4.44E-86 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69848 PF00069 Pkinase 6.20E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00352 K08867 - fve:101313653 688.723