Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00353 ATGTTCTTGTCTGGTTCGGAAGAAGATGGTGCTGGCCCCGTAGATCCTCCGGATCCTTATGTTGTTGAATTTGATCCAACTTGCCGATACATTCGGTACAAAGATGTGCTTGGAAAAGGTGCTTTCAAAACAGTATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATCGATGAGGTGCTACAGTCTCCAGATGACTTGGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCATTGAAGCATAACAACATTGTGAGGTTCTACAATTCATGGATTGATGATAAGAACAAAACCGTTAATATCATTACTGAGTTGTTTACTTCTGGAAGCCTCAGACAGTATTGTAAAAAACACAAAAAGGTTGACATGAAGGCAGTGAAGGGATGGGCAAGACAAATTTTGATGGGTTTGAACTACCTTCATAGTCATAGCCCACCAATTATACACAGGGATCTGAAGTGTGATAACATATTTATCAACGTAATCAAGGAGAAGTAA 522 39.66 MFLSGSEEDGAGPVDPPDPYVVEFDPTCRYIRYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNIVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKKVDMKAVKGWARQILMGLNYLHSHSPPIIHRDLKCDNIFINVIKEK 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34281854 34282990 - Bda007155.1 Bda10g00353 14241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00353 173 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 168 - -
Bda10g00353 173 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Bda10g00353 173 SMART serkin_6 31 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00353 173 Gene3D Transferase(Phosphotransferase) domain 1 114 172 - -
Bda10g00353 173 Pfam Protein kinase domain 34 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00353 173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bda10g00353 173 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 168 - -
Bda10g00353 173 SUPERFAMILY Protein kinase-like (PK-like) 28 168 IPR011009 -
Bda10g00353 173 ProSiteProfiles Protein kinase domain profile. 31 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00353 Bda-Chr10:34281854 Bda04g00335 Bda-Chr4:48341510 1.03E-114 dispersed
Bda10g00352 Bda-Chr10:34257425 Bda10g00353 Bda-Chr10:34281854 4.44E-86 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69849 PF00069 Pkinase 1.30E-29 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00353 K08867 - pop:18099005 299.286