Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00361 ATGGGTTTGAAAAAGCCTTATTGTGCTGTAATTTTGATACAAACATCATTTGCTGGCATGAGTTTGCTCTCTAAAGCTGCCTTTGATGGAGGCATGAGTCCTTTTGTCTTTCTCTTCTACAGACAAGCCATTGGAACCATCTTCTTAGTCCCTCTCTCTTTGTTTTGCGAAAGAAAACCTCGACCGCCACTTAGTTTTATGTCCTTCTGCAAAATTTTCATGCTTGCATTTCTTGGGATAACCATTGGATTGAATGCTTACGGAGTTGGTGTCAATTTGACTTCTGCAACTTTGGGGGCTGCAGCCTTTAATTGTCTTCCTGTTACCACCTTCTTCTTTGCTCTTTTACTTGGAATGGAGAAGGTGAGAGTAAGGAAGGCATCAGGAGTAGCAAAAATGGCGGGGATCGTCTTGTGCATCACAGGTGTGGCGATCCTGACTTTTTACAAGGGCCCTCATTTGAAACCATTCTTTCATAATCAGCTTCGTCATCATCCATCCCAATCTTCATCCTTTTCTTCTTCCTCTTCTTCTAACCTAAAATGGATCATCGGTTGTTTTCTTCTGGTTATCTCCAGTGTTTCTTGGGGGCTATGGCTTGTTCTTCAGGCACAGTTTCTGAAAACATATCCATCTCCGCTTTCTTTCACTTCTCTGCAAATAATTTCAAGCGCATTTCAATCGTTGTTCGTCGCCATTGCGTTTGAACGAGACCCAGCTCAGTGGAAATTGGGTTTCAATATCAGATTACTCGCCGTGGTTTACTGTGGGATAATGGTGACCTGTTTTGCAAACCTCTTGCAAAGCTGGGTGATCAAAGTGAAGGGGCCTGTCTTCCAAGCCGTGTCAACACCATTGAACTTGGTTGTCACCATGACTGGCTCATTGCTTCTCTTAAGTGAGAGCATTTGTGTGGGAAGCATTATGGGAGCAGCGATGTTGGTGGGGAGCCTTTACAGTGTTCTATGGGGGAAATGCGAAGAACAGAAGAGCAATGAAAGAGACGATGCTTCAGCAGGAAACGAAAGTGAAAAGCAGAAAGAGACGAGCAACGCAGAAGCAAAAATGATGGATCAAGTCTAA 1083 43.67 MGLKKPYCAVILIQTSFAGMSLLSKAAFDGGMSPFVFLFYRQAIGTIFLVPLSLFCERKPRPPLSFMSFCKIFMLAFLGITIGLNAYGVGVNLTSATLGAAAFNCLPVTTFFFALLLGMEKVRVRKASGVAKMAGIVLCITGVAILTFYKGPHLKPFFHNQLRHHPSQSSSFSSSSSSNLKWIIGCFLLVISSVSWGLWLVLQAQFLKTYPSPLSFTSLQIISSAFQSLFVAIAFERDPAQWKLGFNIRLLAVVYCGIMVTCFANLLQSWVIKVKGPVFQAVSTPLNLVVTMTGSLLLLSESICVGSIMGAAMLVGSLYSVLWGKCEEQKSNERDDASAGNESEKQKETSNAEAKMMDQV 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34564386 34566628 - Bda007167.1 Bda10g00361 14249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00361 360 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Bda10g00361 360 Pfam EamA-like transporter family 5 147 IPR000620 GO:0016020|GO:0016021
Bda10g00361 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Bda10g00361 360 PANTHER WAT1-RELATED PROTEIN 5 338 IPR030184 GO:0016021|GO:0022857
Bda10g00361 360 MobiDBLite consensus disorder prediction 331 352 - -
Bda10g00361 360 MobiDBLite consensus disorder prediction 331 360 - -
Bda10g00361 360 PANTHER WAT1-RELATED PROTEIN 5 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00343 Bda-Chr4:48658751 Bda10g00361 Bda-Chr10:34564386 1.12E-151 dispersed
Bda10g00347 Bda-Chr10:34097858 Bda10g00361 Bda-Chr10:34564386 3.07E-121 dispersed
Bda10g00361 Bda-Chr10:34564386 Bda10g00365 Bda-Chr10:34806426 0 dispersed
Bda10g00363 Bda-Chr10:34652068 Bda10g00361 Bda-Chr10:34564386 1.12E-57 dispersed
Bda10g00361 Bda-Chr10:34564386 Bda10g00362 Bda-Chr10:34573842 1.85E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00361 - - pper:18781550 408.297