Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00372 | ATGCTTTTGAGTTCCTTCTTTCTCGTTTCTTCTTCCCAGAAATCTCCCTTAAACAAAGCAATTGTACAACTCATGGATATAAACAACCCTACTAGCTGGGATCTTGAACTAGTGGCCATGGAAGATCATCTCCTCCACAGCCAAGTTCCTTTCAGTCATCATTCTCTTTTGCCCTATTTATATATTCCCGTTGATCAAATCCCGTACAATAACCAGCCGACCTCTGCTAATTTTAACTGTCAAGTGGCGAATTGTGTGAAGGGTGATGAACAAGAATCAGATCAAGATCTTGGTGCAATGAAGGAGATGATGTACAGAATTGCATCTATGCAGCCAGTCGACATTGACCCTGCCACCATCCCAAAGCCGAAACGGAAGAATGTTCGAATCAGTGACGACCCTCAGAGCGTAGCTGCCCGTTTACGAAGACAGAAAATAAGCGAGAAAATGCGTATCCTCCAGCGTCTCGTCCCGGGAGGAACCCGATTGGACACGGCTACCATGCTAGATGAAGCAATTCGATATATCAAGTTCTTAAAACGACAAATCCGCTTGTTACAGTCTAATCATCAACCTCAAAGCATTAACTTCAGCTTGGGTTCATCTTCTTCAATTCCAATAGATTGGTCTTTGAGAGCTAATGAAGGTGCAGCCTCCACTGAACCTGGACTTGGAAGCAGCACAGGAAGAAGAAAAATAGGCTACCTGAAGCATGAGGTGATTAATGATTGA | 732 | 43.72 | MLLSSFFLVSSSQKSPLNKAIVQLMDINNPTSWDLELVAMEDHLLHSQVPFSHHSLLPYLYIPVDQIPYNNQPTSANFNCQVANCVKGDEQESDQDLGAMKEMMYRIASMQPVDIDPATIPKPKRKNVRISDDPQSVAARLRRQKISEKMRILQRLVPGGTRLDTATMLDEAIRYIKFLKRQIRLLQSNHQPQSINFSLGSSSSIPIDWSLRANEGAASTEPGLGSSTGRRKIGYLKHEVIND | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35118386 | 35119117 | + | Bda007187.1 | Bda10g00372 | 14260 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00372 | 243 | SMART | finulus | 136 | 185 | IPR011598 | GO:0046983 | |
Bda10g00372 | 243 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 130 | 179 | IPR011598 | GO:0046983 | |
Bda10g00372 | 243 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 76 | 201 | IPR045843 | GO:0003700|GO:0006355 | |
Bda10g00372 | 243 | CDD | bHLH_AtIND_like | 131 | 191 | - | - | |
Bda10g00372 | 243 | Coils | Coil | 169 | 189 | - | - | |
Bda10g00372 | 243 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 136 | 191 | IPR036638 | GO:0046983 | |
Bda10g00372 | 243 | Pfam | Helix-loop-helix DNA-binding domain | 140 | 179 | IPR011598 | GO:0046983 | |
Bda10g00372 | 243 | Gene3D | - | 134 | 197 | IPR036638 | GO:0046983 | |
Bda10g00372 | 243 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 76 | 201 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda04g00329 | Bda10g00372 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00158 | Bda-Chr1:22494252 | Bda10g00372 | Bda-Chr10:35118386 | 5.66E-11 | dispersed | |
Bda04g00329 | Bda-Chr4:47712302 | Bda10g00372 | Bda-Chr10:35118386 | 2.49E-98 | dispersed | |
Bda06g00341 | Bda-Chr6:5469902 | Bda10g00372 | Bda-Chr10:35118386 | 1.48E-10 | dispersed | |
Bda10g00372 | Bda-Chr10:35118386 | Bda10g00844 | Bda-Chr10:42835826 | 9.83E-31 | dispersed | |
Bda10g00372 | Bda-Chr10:35118386 | Bda08g01375 | Bda-Chr8:54326517 | 1.32E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16491 | PF00010 | HLH | 5.90E-07 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00372 | - | - | peu:105113195 | 196.052 |