Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00385 ATGCCTGCTTGGTGGGGGAAAAAGTCCACCAAGAATAAGGGGGAGCAAAACCAGCGTCAGGAGGAAGAATTCCATTGCAGCCGCGTCAAATTCTCAAAGTCATCCATAAAAACAGACAACAAATCAAGAGACAAGCTCGAGGGTTTTGACGAGCTTTCTGCCTCGTCTAACTCCCATAAATCGCCCAGGTCTAGCAGAGATCTCGGTTTTTCAGGTGGCGGCACAAGTGGTGGGTCTTCTGGATTTTCTGGTTTCGATTCCGACGGCGCGGAGAGGAAGGGTCATCCTCTTCCTCAGCCATCGATATCTTTATCGCATGGCTTTGTGATAGATCATGGGGTTGGAATCGGATCTGGGTCGGCTTCAGTGTCGAGTGTTAGTTCTTCAGGGTCTTCCGATGATCATTTGATTGCTCAAAATCATGGGTGCCAATTTGCTGTATTTAGTGCTTCAGATTCACCACGCACAGATTCAACTACGAGAAGTTCAGGAGCAGGATCGAGGGGCCCCACGAGCCCAACTTCCCCTCTTAACCCACGGCTATGCAGGTTCAGTCTCGACTCTACAAGTGGAAAGGTTGAAGATGGGAAGAGCCAATGCCATCCTCTGCCACTTCCACCGGGATCTCCGACTAGCCCTTCTGTTTTGCCCAACATTCGATCAGTTGGAGCTTCTGAAAATGCATCTGCCCAGCCTTGTTGGAAGAAGGGTCGGCTTCTAGGACGAGGGACATTCGGACATGTTTACCTCGGATTCAATAGTGTAAGTGGACAAATGTGTGCAATAAAGGAAGTGAAGGTTATAGGAGACGACTCGTCGTCAAAAGAATCTCTCAAGCAGCTGAACCAGGAGATAAACTTGCTTAGCCAACTTTCACACCCAAATATTGTTCGATATTACGGAAGTGAAATGGGTGATGAAGCACTCTCAGTTTATTTAGAGTACGTCTCAGGTGGCTCGATCTACAAATTACTCCAAGAATATGGGGCATTTAAGGAACCCGTGATACAGAATTACACGAGAAAAATCGTTTCTGGACTTGCTTATCTCCATGCAAGAAATACAGTGCACAGGGATATTAAAGGGGCTAACATATTAGTAGATCCCAATGGCGAGATCAAGTTGGCAGACTTCGGCATGGCTAAACATATAACCAATTGTACCTCAATGCTGTCTTTCAAAGGAAGTCCTCATTGGATGGCACCTGAGGTTGTGATGAATACGAATGGCTACAGTCTGGCCGTCGATATTTGGAGCTTGGGTTGTACGGTTCTTGAAATGGCGACCTCGAAACCGCCTTGGAGCAAGTACGAAGGGGTGGCTGCCATTTTTAAAATAGGAAACAGCAAAGAGATTCCTGAAATTCCCGAACATCTTTCAAATGATGCGAGAAGTTTTGTCAAACTCTGCCTGCAACGAGAGCCTGCGGCACGTCCAACTGCTGCACAATTACTAGAACACCCTTTTGTCCGAGATCATCCATCGCCTAGAGTTCTTGATAGCAACATCCCGAATGACTTCTTTCCCTTTGCCTACGACGGAAGTCAGACACCCCCGAGGTTAGATCATCACGCAAATAGGAAAAGCATAAGCAATTGTGATGGAGAATACCTCCCAAAACCAGTAGTAACAACGTCAAGAGCGATGAAAAGATCAAGTGAAAACATAAGATTAATCACATCATTACCAGTCTCCCCAAGCTCGAGCCCTTTGCGGCATTATGGACATGAACAAAGAAGCTTCCTATTTTCGCCACCTCATCCCTCTTACGTGAAGATGATGGGGCAGAGTGGTTATTCCAACTGGAACGACTTCTCATTGCATCCGATGAAGCCAAACACGATGTACAATCTCGATCCCGACCCTCTAATTAGAGTCCATACACCTGGTGGATCCCCAAGGACAAGACCCATGTAA 1917 46.74 MPAWWGKKSTKNKGEQNQRQEEEFHCSRVKFSKSSIKTDNKSRDKLEGFDELSASSNSHKSPRSSRDLGFSGGGTSGGSSGFSGFDSDGAERKGHPLPQPSISLSHGFVIDHGVGIGSGSASVSSVSSSGSSDDHLIAQNHGCQFAVFSASDSPRTDSTTRSSGAGSRGPTSPTSPLNPRLCRFSLDSTSGKVEDGKSQCHPLPLPPGSPTSPSVLPNIRSVGASENASAQPCWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVIGDDSSSKESLKQLNQEINLLSQLSHPNIVRYYGSEMGDEALSVYLEYVSGGSIYKLLQEYGAFKEPVIQNYTRKIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITNCTSMLSFKGSPHWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKEIPEIPEHLSNDARSFVKLCLQREPAARPTAAQLLEHPFVRDHPSPRVLDSNIPNDFFPFAYDGSQTPPRLDHHANRKSISNCDGEYLPKPVVTTSRAMKRSSENIRLITSLPVSPSSSPLRHYGHEQRSFLFSPPHPSYVKMMGQSGYSNWNDFSLHPMKPNTMYNLDPDPLIRVHTPGGSPRTRPM 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35564573 35568694 - Bda007206.1 Bda10g00385 14273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00385 638 Gene3D Transferase(Phosphotransferase) domain 1 233 507 - -
Bda10g00385 638 SUPERFAMILY Protein kinase-like (PK-like) 234 543 IPR011009 -
Bda10g00385 638 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 619 - -
Bda10g00385 638 MobiDBLite consensus disorder prediction 51 83 - -
Bda10g00385 638 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 619 - -
Bda10g00385 638 MobiDBLite consensus disorder prediction 12 50 - -
Bda10g00385 638 MobiDBLite consensus disorder prediction 148 195 - -
Bda10g00385 638 Pfam Protein kinase domain 235 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00385 638 ProSiteProfiles Protein kinase domain profile. 234 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00385 638 MobiDBLite consensus disorder prediction 1 104 - -
Bda10g00385 638 MobiDBLite consensus disorder prediction 148 216 - -
Bda10g00385 638 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524
Bda10g00385 638 CDD STKc_MEKK1_plant 234 490 - -
Bda10g00385 638 SMART serkin_6 234 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00372 Bda-Chr4:50125331 Bda10g00385 Bda-Chr10:35564573 0 dispersed
Bda10g00385 Bda-Chr10:35564573 Bda14g01046 Bda-Chr14:8802804 0 dispersed
Bda02g00166 Bda-Chr2:28647709 Bda10g00385 Bda-Chr10:35564573 6.49E-18 transposed
Bda10g00385 Bda-Chr10:35564573 Bda10g00399 Bda-Chr10:36060174 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69850 PF00069 Pkinase 3.00E-72 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00385 K04421 - jre:109008901 766.533