Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00399 ATGCCTGCTTGGTGGGGGAAAAAGTCCACCAAGAATAAGGGGGAGCAAAACCAGCATCAGGAGGAAGAATTCCATTGCAGCCGCGTCAAATTCTCAAAGTCATCCATAAAAACAGACAACAAATCAAGAGACAAGCTCGAGGGTTTTGACGAGCTTTCTGCCTCATCTAACTCCCATAAATCGCCCAGGTCTAGCAGAGATCTCGGTTTTTCAGGTGGTGGCACAAGTGGTGGGTCTTCTGGATTTTCTGGTTTCGATTCCGACGGCGCGGAGAGGAAGGGTCATCCTCTTCCTCAGCCATCGATATCTTTATCGCATGGCTTTGTGATAGATCATGGGGTTGGAATCGGATCTGGGTCGGCTTCAGTGTCGAGTGTTAGTTCTTCAGGGTCTTCCGATGATCATTTGATTGCTCAAAATCATGGGTGCCAATTTGCTGTATTTAGTGCTTCAGATTCACCACGCACAGATTCAACTGCGAGAAGTTCAGGAGCAGGATCGAGGGGCCCCACGAGCCCAACTTCCCCTCTTAACCCACGGCTATGCAGGTTCAGTCTCGACTCTACAAGTGGAAAGGTTGAAGATGGGAAGAACCAATGCCATCCTCTGCCACTTCCACCGGGATCTCCGACTAGCCCTTCTGTTTTGCCTAACATTCGATCAGTTGGAGCTTCTGAAAATGCATCTGCCCAGCCTTGTTGGAAGAAGGGTCGGCTTCTAGGACGAGGGACATTCGGACATGTTTACCTCGGATTCAATAGTGTAAGTGGACAAATGTGTGCAATAAAGGAAGTGAAGGTTATAGGAGACGACTCGTCGTCAAAAGAATCTCTCAAGCAGCTGAACCAGGAGATAAACTTGCTTAGCCAACTTTCACACCCAAATATTGTTCGATATTACGGAAGTGAAATGGGCGATGAAGCACTCTCAGTTTATTTAGAGTACGTCTCAGGCGGCTCGATCTACAAATTACTCCAAGAATATGGGGCATTTAAGGAACCCGTGATACAGAATTACACGAGAAAAATCGTTTATGGACTTGCTTATCTCCATGCAAGAAATACAGTGCACAGGGATATTAAAGGGGCTAACATATTAGTAGATCCCAATGGCGAGATCAAGTTGGCAGACTTCGGCATGGCTAAACATATAACCAATTGTACCTCAATGCTGTCTTTCAAAGGAAGTCCTCATTGGATGGCACCTGAGGTTGTGATGAATACGAATGGCTACAGTCTGGCCGTCGATATTTGGAGCTTGGGTTGTACGGTTCTTGAAATGGCGACCTCGAAACCGCCTTGGAGCAAGTACGAAGGGGTGGCTGCCATTTTTAAAATAGGAAACAGCAAAGAGATTCCTGAAATTCCCGAACATCTTTCAAATGATGCGAGAAGTTTTGTCAAACTCTGCCTGCAACGAGAGCCTGCGGCACGTCCAACTGCTGCACAATTACTAGAACACCCTTTTGTCCGAGATCATCCATCGCCTAGAGTTCTTGATAGCAACATCCCGAATGACTTCTTTCCCTTTGCCTACGACGGAAGTCAGACACCCCCGAGGTTAGATCATCACGCAAATAGGAAAAGCGTAAGCAATTGTGATGGAGAATACCTCCGAAAACCAGTAGTTACAACGGCAAGAGCGATGAAAAGATCAAGTGAAAACATAAGATTAATCACATCATTACCAGTCTCCCCAAGCTCGAGCCCTTTGCGGCATTATGGACATGAACACAGAAGCTTCCTACTTTCGCCACCTCATTCCTCTTACGTGAAGATGACGGGGCAGAGTGGTTATTCCAACTGGAACGACTTCTCATTGCATCCAATGAAGCCAAACACGATGTACAATCTCGATCCCGACCCTCTAATTAGAGTCCATACACCTGGTGGATCCCCAAGGACAAGACCCATGTAA 1917 46.74 MPAWWGKKSTKNKGEQNQHQEEEFHCSRVKFSKSSIKTDNKSRDKLEGFDELSASSNSHKSPRSSRDLGFSGGGTSGGSSGFSGFDSDGAERKGHPLPQPSISLSHGFVIDHGVGIGSGSASVSSVSSSGSSDDHLIAQNHGCQFAVFSASDSPRTDSTARSSGAGSRGPTSPTSPLNPRLCRFSLDSTSGKVEDGKNQCHPLPLPPGSPTSPSVLPNIRSVGASENASAQPCWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVIGDDSSSKESLKQLNQEINLLSQLSHPNIVRYYGSEMGDEALSVYLEYVSGGSIYKLLQEYGAFKEPVIQNYTRKIVYGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITNCTSMLSFKGSPHWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKEIPEIPEHLSNDARSFVKLCLQREPAARPTAAQLLEHPFVRDHPSPRVLDSNIPNDFFPFAYDGSQTPPRLDHHANRKSVSNCDGEYLRKPVVTTARAMKRSSENIRLITSLPVSPSSSPLRHYGHEHRSFLLSPPHSSYVKMTGQSGYSNWNDFSLHPMKPNTMYNLDPDPLIRVHTPGGSPRTRPM 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36060174 36064301 + Bda007226.1 Bda10g00399 14287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00399 638 SMART serkin_6 234 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00399 638 MobiDBLite consensus disorder prediction 51 83 - -
Bda10g00399 638 MobiDBLite consensus disorder prediction 619 638 - -
Bda10g00399 638 SUPERFAMILY Protein kinase-like (PK-like) 234 539 IPR011009 -
Bda10g00399 638 MobiDBLite consensus disorder prediction 12 50 - -
Bda10g00399 638 Gene3D Transferase(Phosphotransferase) domain 1 233 507 - -
Bda10g00399 638 MobiDBLite consensus disorder prediction 1 104 - -
Bda10g00399 638 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 619 - -
Bda10g00399 638 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 619 - -
Bda10g00399 638 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524
Bda10g00399 638 CDD STKc_MEKK1_plant 234 490 - -
Bda10g00399 638 MobiDBLite consensus disorder prediction 149 184 - -
Bda10g00399 638 Pfam Protein kinase domain 235 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00399 638 ProSiteProfiles Protein kinase domain profile. 234 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00399 Bda14g01046 CCT
Bda04g00372 Bda10g00399 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00399 Bda-Chr10:36060174 Bda15g00714 Bda-Chr15:10541285 2.68E-137 dispersed
Bda14g01046 Bda-Chr14:8802804 Bda10g00399 Bda-Chr10:36060174 0 transposed
Bda10g00385 Bda-Chr10:35564573 Bda10g00399 Bda-Chr10:36060174 0 wgd
Bda10g00399 Bda-Chr10:36060174 Bda04g00372 Bda-Chr4:50125331 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69851 PF00069 Pkinase 7.90E-72 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00399 K04421 - jre:109008901 758.444