Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00416 ATGGGAGAAGGCGGAACAGCTACGAGCAGCGGAAACAGAGGTATTCCTGGGGGCAATAACTCCGCCCATTCCAACAAAAACAACAACGATAATGGCAACAACAGCAACAAGCCCGAGTGGCTGCAACACTACGATCTGATCGGGAAGATCGGAGAGGGAACTTATGGTCTTGTATTCCTTGCCAGAATTAAAGCTCCGGCCGCAAGTCGGGGAAAGTCCATTGCCATTAAGAAGTTCAAGCAATCTAAGGACGGTGACGGTGTTTCCCCAACCGCAATCCGCGAAATAATGTTGCTGCGGGAAATAACACATGAGAATGTTGTGAAGCTGGTGAACGTCCACATTAATCCCGCAGATATGTCCCTGTATCTGGCCTTTGATTACGCAGAACACGACCTCTATGAAATTATTAGACATCACAGGGACAAGGTCAACCATGCCATTAATCATTACACTGTAAAATCATTGTTGTGGCAGCTGCTTAATGGCCTGAACTATCTTCATAGTAATTGGATCATTCACCGTGATCTAAAGCCCTCAAATATTTTGGTTATGGGAGAGGGAGAAGAGCAGGGTATTGTTAAAATAGCTGATTTTGGCCTTGCAAGAATATACCAAGCCCCCCTTAAACCATTATTTGACAATGGGGTTGTTGTAACCATCTGGTATCGTGCCCCCGAGCTACTCCTAGGAGCGAAGCACTATACAAGTGCTGTTGATATGTGGGCTGTTGGGTGCATTTTTGCAGAGCTTTTGACACTGAAACCGCTCTTTCAAGGATCAGAAGTAAAAGGGACACCAAATCCTTTCCAGATATTATCTAATAATACTATTTTCCACATTAATGTTGTAGGCCATCCCACAATCGAAAAGTGGCCAACACTTGCAAATCTTCCACATTGGCAACAAGATGTCCAACATATTCAAGGTCATAAGTATGATAATGCTGGACTTTATAGTGTTGTTCATCTTTCTCCTAAAAGTCCCGCGTACGATCTCCTATCAAAGATGTTAGAATATGATCCCAGAAAACGTATAACAGCAGCACAAGCTCTGGATCATGAGTATGTTTCTCTCAGCACCTTTAAATTTTCTTACTCTGCCTTGGTGCCCAACCAACCTGGGGAGAAGATTGTAAATTACACTACTCGTCCTGTAGACACAACTGCTGATTTTGAGGGAACAACTAGCCTTCAACCCACACAATCGGTATCATCGGGAAATCAAGTTTCTGGGAATATGCAGGGTGCACATGTAGTGGCCAACAGGTCTGTCCCTCGGGCTATGTCCATGGTTGCCATGCAGAGGATGCAATCTCAAGGCATGACGGCTTATAATCTTGCATCTCAGGCTGGGATGGGTGGTGGTATGAATCCTAGCGGCATTCCAATGCAACGTGGTGTTTCTGCTCAGACCCACCAGCAACAACAGCAGTTGAGGCGCAAAGACCCCGGAATGGGGATGCCTGGATACCCACCACAGCAGAAATCAAGACGCATGTGA 1503 45.51 MGEGGTATSSGNRGIPGGNNSAHSNKNNNDNGNNSNKPEWLQHYDLIGKIGEGTYGLVFLARIKAPAASRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINPADMSLYLAFDYAEHDLYEIIRHHRDKVNHAINHYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGIVKIADFGLARIYQAPLKPLFDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGSEVKGTPNPFQILSNNTIFHINVVGHPTIEKWPTLANLPHWQQDVQHIQGHKYDNAGLYSVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALDHEYVSLSTFKFSYSALVPNQPGEKIVNYTTRPVDTTADFEGTTSLQPTQSVSSGNQVSGNMQGAHVVANRSVPRAMSMVAMQRMQSQGMTAYNLASQAGMGGGMNPSGIPMQRGVSAQTHQQQQQLRRKDPGMGMPGYPPQQKSRRM 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36417401 36431480 - Bda007250.6 Bda10g00416 14304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00416 500 MobiDBLite consensus disorder prediction 464 481 - -
Bda10g00416 500 ProSitePatterns Protein kinases ATP-binding region signature. 50 78 IPR017441 GO:0005524
Bda10g00416 500 MobiDBLite consensus disorder prediction 1 37 - -
Bda10g00416 500 CDD STKc_CDK8_like 44 356 - -
Bda10g00416 500 Pfam Protein kinase domain 44 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00416 500 Gene3D Phosphorylase Kinase; domain 1 27 128 - -
Bda10g00416 500 PANTHER CYCLIN-DEPENDENT KINASE E-1 32 499 - -
Bda10g00416 500 Gene3D Transferase(Phosphotransferase) domain 1 129 365 - -
Bda10g00416 500 SMART serkin_6 44 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00416 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Bda10g00416 500 SUPERFAMILY Protein kinase-like (PK-like) 39 358 IPR011009 -
Bda10g00416 500 ProSiteProfiles Protein kinase domain profile. 44 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00416 500 MobiDBLite consensus disorder prediction 454 500 - -
Bda10g00416 500 PANTHER CELL DIVISION PROTEIN KINASE 32 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00416 Bda-Chr10:36417401 Bda01g02188 Bda-Chr1:57847805 1.33E-66 dispersed
Bda10g00416 Bda-Chr10:36417401 Bda15g00140 Bda-Chr15:3843627 1.52E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69852 PF00069 Pkinase 3.40E-65 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00416 K02208 - csv:101203984 773.852