Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00424 ATGCAGCCAAAATCTCCAAATTTGAGGAGATTTCATGGGAAAATTGCTAGAATTATGGTGCTGTTAATGGTCATGGAGATGATGGGGAGTGGGTTTATAGAGAGAGTGGAAGGTTTGACGATGAACTACTACCTCATGAGCTGCCCTGTCCTTGACCTAGTTGTGCAAAGAACTGTCATCGGGGCTTTGAACGGTAATCCGGCCTTGGCCGGTGGCCTTCTCCGCATGCATTTCCATGACTGTTTTATACAGGGATGTGATGGGTCTGTTCTGATTGATTCAACCAAGGAGAACACGGCGGAAAAGGACTCTCCTGCGAATTTGAGTTTGAGAGGGTATGAGGTGATCGACGCAATTAAAGAGGAGCTTGAAGATCGATGCCCTGGTGTGGTCTCTTGTGCTGATATTCTAGCTATGGCTGCTAAAGAAGCTGTTTTCTGGGCCGGAGGTCCGTATTATGAGATCGGAAAAGGTAGAAAAGACGGAATAAGGTCGAAAATAGAAGACACCAGAAACCTTCCTCCGCCGTTCTTCAACGCCTCAGATCTCATCACCATGTTCAACCAGCGTGGCTTCACCGCGAGGGAGATGGTCGCCCTCTCAGGCGCGCACACGCTCGGAGTTGCACGGTGCTCCTCCTTCAAGAGCCGTCTGAACGGCGAAACGGCCGACGCCGCCCTCGATTCGAACTTCAAGTCCGAGCTCGCCAGGACGTGCGGCGGCGGAGACAACGCAGAGCAGGCGTTCGACGCGACGCGGAGCGGGTTCGACAACCTGTATTTCAAGGCTTTGATGAGGAACAACGGAGTTCTTACATCAGATCAGACGTTGTTTTCGAGCTCCAGCACGAGGGGACTTGTTCGGTACTACGCGTTTTACCAGGAGATGTTCTTCATGGATTTCCAGCAGGCGATGGTGAAGATGGGGAATCTGGACGTGAAGGAGGGTTCGAGAGGAGAAGTTCGCCGGAACTGTCGTAGAATCAATGAGATAGGGCTGTAG 1002 51.6 MQPKSPNLRRFHGKIARIMVLLMVMEMMGSGFIERVEGLTMNYYLMSCPVLDLVVQRTVIGALNGNPALAGGLLRMHFHDCFIQGCDGSVLIDSTKENTAEKDSPANLSLRGYEVIDAIKEELEDRCPGVVSCADILAMAAKEAVFWAGGPYYEIGKGRKDGIRSKIEDTRNLPPPFFNASDLITMFNQRGFTAREMVALSGAHTLGVARCSSFKSRLNGETADAALDSNFKSELARTCGGGDNAEQAFDATRSGFDNLYFKALMRNNGVLTSDQTLFSSSSTRGLVRYYAFYQEMFFMDFQQAMVKMGNLDVKEGSRGEVRRNCRRINEIGL 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36664577 36665744 + Bda007264.1 Bda10g00424 14312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00424 333 ProSiteProfiles Plant heme peroxidase family profile. 38 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PANTHER PEROXIDASE 47 32 327 - -
Bda10g00424 333 Pfam Peroxidase 57 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PANTHER PEROXIDASE 25-RELATED 32 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Bda10g00424 333 SUPERFAMILY Heme-dependent peroxidases 36 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda10g00424 333 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Bda10g00424 333 Gene3D - 42 329 - -
Bda10g00424 333 CDD secretory_peroxidase 38 328 IPR033905 GO:0004601|GO:0042744
Bda10g00424 333 Gene3D Peroxidase, domain 2 174 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00424 Bda-Chr10:36664577 Bda15g00875 Bda-Chr15:14287768 3.44E-136 dispersed
Bda15g00932 Bda-Chr15:17050322 Bda10g00424 Bda-Chr10:36664577 1.54E-31 dispersed
Bda10g00424 Bda-Chr10:36664577 Bda08g01192 Bda-Chr8:48017113 4.13E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00424 K00430 - rcu:8285000 433.335