Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00472 ATGGCCATTTTGAAGCTTCTCTCGCTTTACATTTTCTTCTTCTTTCTGCCATTGTCGTCCTCTTCTTCTTCTACAGATGTTCAACTTGTGCTGGGAAAAATCAAAGCTTCGCTGCAAGGTAACTCCCAAAACCTCCTTTTGTCTTCATGGAATGCTTCTGTTCCTCTCTGCCAATGGCGAGGACTCAAATGGGTTTTCTCCGATGGCTCCCCTCTTCTCTGCGACGACCCTTCCCAACCCCAGTGGACCAACCTCACTCTCTTCAATGACCCATCCGTTCATCTCCTTTCTCTGCAGCTTCCTGCTGCCAACCTTACTGGCTCGCTTCCTCCTGAGCTCGGTGAGTTCTCTTTCCTCCACAGCCTCTTCCTCAGCATTAATTCTTTAACCGGAGCTATTCCTCTTGAAATTGGCTACGGCTCGTCTCTTTCTGAAATTGATTTGAGTAATAATTTGTTGAGTGAGGTTTTGCCTCCGTCAATTTGGAATCTCTGCGATAAGATTGTTTCGATTAGAGTTCATGGAAACTCACTATCTGGAGACATTCCACAACCTGCATTGCCTAATTCTACTTGCGCTCGTCTTGAAGTATTGGACGTGAGTGACAACAAATTTTCTGGAAATTTCCCTGAATTTATTACAGGTTTTCAGGGTCTTAAACAGCTTGATCTTAGTGGAAACATGTTTTCTGGTTCTATTCCTGATGGTTTGTCCAAGTTAAGTCTTGAAAAATTGAACCTCTCACACAATAATTTCAGTGGAACCTTACCCCTTTTTGGCAATTCCAAATTTGGAGCAGAAGCTTTCGAGGGAAACAATCCCGGGCTTTGTGGGTCGCCTTTGAGAAGTTGTATCGGAAGTTCAGGACTGAGCTCCGGCGCCATCGCCGGAATTGTGATCGGATTGATGACCGGAACGGTGGTTTTAGCTTCACTGTCAATCGGGTATTTTCAGAACCAAAAAAGAAAGAGCAGAGGCGAATTCGAGGAAGAAGAAGAAGAAGGAGAAGAAGAAGACTCAGAAAACCAAAGCAACGGAGGCCGGGGAAACGATGGGAAGCTGATTCAGTTTCAGGGCGGGGAGCATTTGACATTAGAGGAGGTGTTGAACGCAACAGGGCAAGTAATGGAGAAAACCAGCTATGGAACTGTGTATAAAGCCAAGCTTGCAGACGGGGGAGTGATTGCTTTGAGATTGTTGAGAGAAGGTAGCTGCAAAGATAGAAACTCCTGTTTAATGGCTATTAAGCAATTGGGGAGGATCCGCCATGAAAATTTGATTCCTCTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTTCTAATCTATGACTATCTTCCTCAAAGAAACCTGCATGATCTTTTACATGAATCTACAGCAGGGAAACCAGCACTGAATTGGGCTCGAAGACATAAAATAGCCTTAGGCGTAGCTCGAGGACTAGCATATCTTCACAGTCTTGAGACACCAGTTACTCATGGTAATGTGCGGTCTAAAAACGTGCTTGTTGACGAGTTTTTCGTTGCTCGGCTAACCGAGTTCGGCCTTGACAAGCTGATGATTCCTGCCGTTGCTGACGAAATCATCGCACTAGCAAAGACCGATGGATACAAGGCACCAGAACTTCAAAAGATGAAGAAATGCAATTCAAGAACAGACGTATACGCGTTTGGAATATTCTTGTTGGAAATTTTGATAGGAAAAAAACCCGGAAAAGATGGGAGAAACGGGGAGTTTGTGGATTTGCCGTCGATGGTGAAAGTTGCAGTTCTAGAGGAGACGACAATGGAGGTTTTTGACGTTGAGATTCTAAAGGGTATAAGAACTCCGATGGAAGATGGGTTGGTCCAGGCATTGAAGCTAGCAATGGGTTGTTGTGCTCCGGTTGCGTCAGTGAGGCCGGCAATGGAAGAAGTCGTAAAGCAATTGGAAGAGAATAGACCAAGGAATAGGTCGGCATTGTATAGCCCGACTGAAACGAGGAGCGAAATCGGTACGCCTTTTTAA 2010 45.17 MAILKLLSLYIFFFFLPLSSSSSSTDVQLVLGKIKASLQGNSQNLLLSSWNASVPLCQWRGLKWVFSDGSPLLCDDPSQPQWTNLTLFNDPSVHLLSLQLPAANLTGSLPPELGEFSFLHSLFLSINSLTGAIPLEIGYGSSLSEIDLSNNLLSEVLPPSIWNLCDKIVSIRVHGNSLSGDIPQPALPNSTCARLEVLDVSDNKFSGNFPEFITGFQGLKQLDLSGNMFSGSIPDGLSKLSLEKLNLSHNNFSGTLPLFGNSKFGAEAFEGNNPGLCGSPLRSCIGSSGLSSGAIAGIVIGLMTGTVVLASLSIGYFQNQKRKSRGEFEEEEEEGEEEDSENQSNGGRGNDGKLIQFQGGEHLTLEEVLNATGQVMEKTSYGTVYKAKLADGGVIALRLLREGSCKDRNSCLMAIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPQRNLHDLLHESTAGKPALNWARRHKIALGVARGLAYLHSLETPVTHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEIIALAKTDGYKAPELQKMKKCNSRTDVYAFGIFLLEILIGKKPGKDGRNGEFVDLPSMVKVAVLEETTMEVFDVEILKGIRTPMEDGLVQALKLAMGCCAPVASVRPAMEEVVKQLEENRPRNRSALYSPTETRSEIGTPF 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37756360 37759225 + Bda033119 Bda10g00472 14360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00472 669 Pfam Leucine rich repeat 194 252 IPR001611 GO:0005515
Bda10g00472 669 Gene3D Ribonuclease Inhibitor 167 286 IPR032675 -
Bda10g00472 669 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 5 669 - -
Bda10g00472 669 Gene3D Phosphorylase Kinase; domain 1 348 446 - -
Bda10g00472 669 SUPERFAMILY L domain-like 54 259 - -
Bda10g00472 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 669 - -
Bda10g00472 669 SUPERFAMILY Protein kinase-like (PK-like) 375 645 IPR011009 -
Bda10g00472 669 MobiDBLite consensus disorder prediction 648 669 - -
Bda10g00472 669 MobiDBLite consensus disorder prediction 650 669 - -
Bda10g00472 669 Gene3D Ribonuclease Inhibitor 27 166 IPR032675 -
Bda10g00472 669 ProSiteProfiles Protein kinase domain profile. 370 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00472 669 Gene3D Transferase(Phosphotransferase) domain 1 447 662 - -
Bda10g00472 669 MobiDBLite consensus disorder prediction 323 353 - -
Bda10g00472 669 Pfam Protein tyrosine and serine/threonine kinase 374 644 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00765 Bda-Chr6:10645222 Bda10g00472 Bda-Chr10:37756360 4.09E-55 dispersed
Bda10g00472 Bda-Chr10:37756360 Bda12g00261 Bda-Chr12:2791372 1.65E-92 dispersed
Bda10g00472 Bda-Chr10:37756360 Bda14g00224 Bda-Chr14:1519843 2.64E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69853 PF07714 PK_Tyr_Ser-Thr 2.40E-26 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00472 - - rcu:8262759 1019.61