Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda10g00508 | CTTAAGGAACAGAATCCTAGTCTTAAGGTTGGGGAAGAGGAGGAGATCGGAAATCAAGGGTTGAAGAAGAAGCTTCTTAAGGAAGGTGAAGGCTGGGAATGGGATGCTCCTGATAATGGCGACGAGGTTGAAGGTACGAATGACCAGTCAAAAAATCAACCCACTTTGCTGGTATCGACTCTGATTTTCGTCTGTCTTCTTCTTTCAGTTCATTACACCGAGACTTTGCTTGATGGGACTAAGTTTGACTCAAGTCGCGATCGAGATACAACCTTCAAATTCATTCTTGGGCAAGGTCAAGTGATTAAAGGATGGGACCTGGGAATCAAAACAATGAAGAAACATGAAAATGCTCTTTTCACCATTCCACCTGATCTAGCTTATGGAGCATCGGGATCCCCTCATTACGTGATTGCAATTAAGTTTGAAGCTCAGCTCGATGATGGTGCAGTTGTTGCCAAGTCTGATGGAATAGAGTTTACTGTCCGAGACGGTTGTTTTTGCCCTGCTTTATCGAAGGCTGTCAAAACAATGGAGAAGGGTGAGAAGGTCCTTCTGACGGTGAAGCCACAATATGGGTTTGGGGAGAAAGGAAAGCCAGCCTCTGGTGGTGAGGGTGCTGTTCTTCCAAACGCAACTCTTCAGATCACTATGGAGTTGTTATCATGGATAACCGTCTCAGAAGTTACGAATGACAGAAAGGTTATCAAGATAATTCTCAAGGAAGGAGAAGGGTACGAGCGTCCAAGTGATGGATCTGTCGTAAAGATAAAGGTGATCGGGAAGCTGCATGATGGTACAATATTTATGAAGAAGGGCCATGGCGATGGGGCGGAGCTCCATGAATTTAAGACCGAGGAAGAGCAAGTAATTGATGGGCTTGATAGAGCTGTAATGGCAATGAAAAAGGGGGAGGTGGCATTGCTGACTATTGCTCCCGAGTATGCATATGGTTCATCAGAGTCGTCACAGGAATTAGCCATTGTTCCTCCCAACTCAACTGTGTTCTTTGAGGTTGAACTCGTCTCTTTTGTCAAGGAGAAGGAATCATGGCAAATGAATACGCAGGAGAAGATTGAAGGTGCTGGTAAGAAGAAGGAAGAAGGAAATGCTTTGTTTAAGGCTGGAAAATATGACAGAGCTGCCAAGAGATACGAAAAAGCTGTAAAGTATATTGAGTACGATTTTACTTTCAGCGAGGAGGTGTTAAAAGCTGAAAGTGGGAATGTGAAGGCCCTCCACATAAGGGCACAGGCTTACGTTCAAATTGAAGAATTTGACTTGGCAGAGGTTGATATTAAAAAGGCCTTGGAGATTGACCCGGACAATAGCAGGGAAGTTAAACTAGAGTACAGAAATTTGAAGGAGAAGATGGAGGAATATCACAAGAAGGAAGCTGAATTTTATGGCAACATGATTGCCAAGATGGACAAGACAGGGGTCCTTGAGATTCTAAAGTAA | 1461 | 43.87 | LKEQNPSLKVGEEEEIGNQGLKKKLLKEGEGWEWDAPDNGDEVEGTNDQSKNQPTLLVSTLIFVCLLLSVHYTETLLDGTKFDSSRDRDTTFKFILGQGQVIKGWDLGIKTMKKHENALFTIPPDLAYGASGSPHYVIAIKFEAQLDDGAVVAKSDGIEFTVRDGCFCPALSKAVKTMEKGEKVLLTVKPQYGFGEKGKPASGGEGAVLPNATLQITMELLSWITVSEVTNDRKVIKIILKEGEGYERPSDGSVVKIKVIGKLHDGTIFMKKGHGDGAELHEFKTEEEQVIDGLDRAVMAMKKGEVALLTIAPEYAYGSSESSQELAIVPPNSTVFFEVELVSFVKEKESWQMNTQEKIEGAGKKKEEGNALFKAGKYDRAAKRYEKAVKYIEYDFTFSEEVLKAESGNVKALHIRAQAYVQIEEFDLAEVDIKKALEIDPDNSREVKLEYRNLKEKMEEYHKKEAEFYGNMIAKMDKTGVLEILK | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 38419765 | 38423256 | + | Bda007376.1 | Bda10g00508 | 14396 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda10g00508 | 486 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 65 | 146 | IPR001179 | GO:0003755 | |
| Bda10g00508 | 486 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 252 | 345 | IPR001179 | GO:0003755 | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 345 | 402 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 69 | 135 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 402 | 480 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 4 | 44 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 139 | 231 | - | - | |
| Bda10g00508 | 486 | SUPERFAMILY | FKBP-like | 229 | 363 | - | - | |
| Bda10g00508 | 486 | Gene3D | - | 138 | 224 | IPR046357 | GO:0003755 | |
| Bda10g00508 | 486 | SUPERFAMILY | FKBP-like | 137 | 225 | - | - | |
| Bda10g00508 | 486 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 68 | 137 | IPR001179 | GO:0003755 | |
| Bda10g00508 | 486 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 246 | 342 | IPR001179 | GO:0003755 | |
| Bda10g00508 | 486 | Gene3D | Tetratricopeptide repeat domain | 348 | 398 | IPR011990 | GO:0005515 | |
| Bda10g00508 | 486 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 147 | 224 | IPR001179 | GO:0003755 | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 233 | 344 | - | - | |
| Bda10g00508 | 486 | SUPERFAMILY | FKBP-like | 68 | 135 | - | - | |
| Bda10g00508 | 486 | Gene3D | - | 11 | 137 | IPR046357 | GO:0003755 | |
| Bda10g00508 | 486 | SUPERFAMILY | TPR-like | 350 | 477 | IPR011990 | GO:0005515 | |
| Bda10g00508 | 486 | ProSiteProfiles | TPR repeat profile. | 410 | 443 | IPR019734 | GO:0005515 | |
| Bda10g00508 | 486 | SMART | tpr_5 | 410 | 443 | IPR019734 | GO:0005515 | |
| Bda10g00508 | 486 | SMART | tpr_5 | 362 | 395 | IPR019734 | GO:0005515 | |
| Bda10g00508 | 486 | Coils | Coil | 444 | 464 | - | - | |
| Bda10g00508 | 486 | Pfam | Tetratricopeptide repeat | 411 | 443 | IPR019734 | GO:0005515 | |
| Bda10g00508 | 486 | Gene3D | Tetratricopeptide repeat domain | 399 | 474 | IPR011990 | GO:0005515 | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 233 | 344 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 69 | 135 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 402 | 480 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 4 | 44 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 139 | 231 | - | - | |
| Bda10g00508 | 486 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 345 | 402 | - | - | |
| Bda10g00508 | 486 | Gene3D | - | 225 | 347 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda10g00508 | Bda-Chr10:38419765 | Bda10g00518 | Bda-Chr10:38814020 | 4.61E-06 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda10g00508 | K09571 | - | rcu:8272763 | 647.121 |