Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00508 CTTAAGGAACAGAATCCTAGTCTTAAGGTTGGGGAAGAGGAGGAGATCGGAAATCAAGGGTTGAAGAAGAAGCTTCTTAAGGAAGGTGAAGGCTGGGAATGGGATGCTCCTGATAATGGCGACGAGGTTGAAGGTACGAATGACCAGTCAAAAAATCAACCCACTTTGCTGGTATCGACTCTGATTTTCGTCTGTCTTCTTCTTTCAGTTCATTACACCGAGACTTTGCTTGATGGGACTAAGTTTGACTCAAGTCGCGATCGAGATACAACCTTCAAATTCATTCTTGGGCAAGGTCAAGTGATTAAAGGATGGGACCTGGGAATCAAAACAATGAAGAAACATGAAAATGCTCTTTTCACCATTCCACCTGATCTAGCTTATGGAGCATCGGGATCCCCTCATTACGTGATTGCAATTAAGTTTGAAGCTCAGCTCGATGATGGTGCAGTTGTTGCCAAGTCTGATGGAATAGAGTTTACTGTCCGAGACGGTTGTTTTTGCCCTGCTTTATCGAAGGCTGTCAAAACAATGGAGAAGGGTGAGAAGGTCCTTCTGACGGTGAAGCCACAATATGGGTTTGGGGAGAAAGGAAAGCCAGCCTCTGGTGGTGAGGGTGCTGTTCTTCCAAACGCAACTCTTCAGATCACTATGGAGTTGTTATCATGGATAACCGTCTCAGAAGTTACGAATGACAGAAAGGTTATCAAGATAATTCTCAAGGAAGGAGAAGGGTACGAGCGTCCAAGTGATGGATCTGTCGTAAAGATAAAGGTGATCGGGAAGCTGCATGATGGTACAATATTTATGAAGAAGGGCCATGGCGATGGGGCGGAGCTCCATGAATTTAAGACCGAGGAAGAGCAAGTAATTGATGGGCTTGATAGAGCTGTAATGGCAATGAAAAAGGGGGAGGTGGCATTGCTGACTATTGCTCCCGAGTATGCATATGGTTCATCAGAGTCGTCACAGGAATTAGCCATTGTTCCTCCCAACTCAACTGTGTTCTTTGAGGTTGAACTCGTCTCTTTTGTCAAGGAGAAGGAATCATGGCAAATGAATACGCAGGAGAAGATTGAAGGTGCTGGTAAGAAGAAGGAAGAAGGAAATGCTTTGTTTAAGGCTGGAAAATATGACAGAGCTGCCAAGAGATACGAAAAAGCTGTAAAGTATATTGAGTACGATTTTACTTTCAGCGAGGAGGTGTTAAAAGCTGAAAGTGGGAATGTGAAGGCCCTCCACATAAGGGCACAGGCTTACGTTCAAATTGAAGAATTTGACTTGGCAGAGGTTGATATTAAAAAGGCCTTGGAGATTGACCCGGACAATAGCAGGGAAGTTAAACTAGAGTACAGAAATTTGAAGGAGAAGATGGAGGAATATCACAAGAAGGAAGCTGAATTTTATGGCAACATGATTGCCAAGATGGACAAGACAGGGGTCCTTGAGATTCTAAAGTAA 1461 43.87 LKEQNPSLKVGEEEEIGNQGLKKKLLKEGEGWEWDAPDNGDEVEGTNDQSKNQPTLLVSTLIFVCLLLSVHYTETLLDGTKFDSSRDRDTTFKFILGQGQVIKGWDLGIKTMKKHENALFTIPPDLAYGASGSPHYVIAIKFEAQLDDGAVVAKSDGIEFTVRDGCFCPALSKAVKTMEKGEKVLLTVKPQYGFGEKGKPASGGEGAVLPNATLQITMELLSWITVSEVTNDRKVIKIILKEGEGYERPSDGSVVKIKVIGKLHDGTIFMKKGHGDGAELHEFKTEEEQVIDGLDRAVMAMKKGEVALLTIAPEYAYGSSESSQELAIVPPNSTVFFEVELVSFVKEKESWQMNTQEKIEGAGKKKEEGNALFKAGKYDRAAKRYEKAVKYIEYDFTFSEEVLKAESGNVKALHIRAQAYVQIEEFDLAEVDIKKALEIDPDNSREVKLEYRNLKEKMEEYHKKEAEFYGNMIAKMDKTGVLEILK 486
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 38419765 38423256 + Bda007376.1 Bda10g00508 14396
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00508 486 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 65 146 IPR001179 GO:0003755
Bda10g00508 486 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 252 345 IPR001179 GO:0003755
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 345 402 - -
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 135 - -
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 402 480 - -
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 44 - -
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 139 231 - -
Bda10g00508 486 SUPERFAMILY FKBP-like 229 363 - -
Bda10g00508 486 Gene3D - 138 224 IPR046357 GO:0003755
Bda10g00508 486 SUPERFAMILY FKBP-like 137 225 - -
Bda10g00508 486 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 68 137 IPR001179 GO:0003755
Bda10g00508 486 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 246 342 IPR001179 GO:0003755
Bda10g00508 486 Gene3D Tetratricopeptide repeat domain 348 398 IPR011990 GO:0005515
Bda10g00508 486 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 147 224 IPR001179 GO:0003755
Bda10g00508 486 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 233 344 - -
Bda10g00508 486 SUPERFAMILY FKBP-like 68 135 - -
Bda10g00508 486 Gene3D - 11 137 IPR046357 GO:0003755
Bda10g00508 486 SUPERFAMILY TPR-like 350 477 IPR011990 GO:0005515
Bda10g00508 486 ProSiteProfiles TPR repeat profile. 410 443 IPR019734 GO:0005515
Bda10g00508 486 SMART tpr_5 410 443 IPR019734 GO:0005515
Bda10g00508 486 SMART tpr_5 362 395 IPR019734 GO:0005515
Bda10g00508 486 Coils Coil 444 464 - -
Bda10g00508 486 Pfam Tetratricopeptide repeat 411 443 IPR019734 GO:0005515
Bda10g00508 486 Gene3D Tetratricopeptide repeat domain 399 474 IPR011990 GO:0005515
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 233 344 - -
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 69 135 - -
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 402 480 - -
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 4 44 - -
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 139 231 - -
Bda10g00508 486 PANTHER PEPTIDYLPROLYL ISOMERASE 345 402 - -
Bda10g00508 486 Gene3D - 225 347 IPR046357 GO:0003755
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00508 Bda-Chr10:38419765 Bda10g00518 Bda-Chr10:38814020 4.61E-06 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00508 K09571 - rcu:8272763 647.121