Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00517 | ATGGAAAAGAAAGGAAGTTGGTTTTGTGCAGTGACAAAAGCTCTCGGTTCTGAATCTAATGAAAAGAAAGATCAGAAAACCCAGAAAACAAAGAGAAAATGGTTTGGAAAGAATAAGAAAACGGATGTGATTACGTTTTTGGAAGAAACAACTCCACTGCCTCTTCCTTCGCCACTTCCAGCTCTAGAAAATGTGAAATTGACAAGTGTTGAGAATGAACAAAGCAAGCATGCCTACTCTGTGGCACTTGCCACCGCAGCGGCAACAGAGGCTGCTGTAGCGGCCGCTCAGGCAGCTGCCGAGGTTGTTCGTCTGACCACTATTCCTCGTTTTGTGGGAAAATCAAAAGACGAAATAGCAGCCATCAATATTCAAACAGCATTTCGTGGATATCTGGCGAGAAGAGCTTTGCGAGCATTAAGAGGGCTTGTGCGGTTGAAAATGTTGATGGAAGGGCCATCTGTAAAACGGCCAGTGGCTTCCTCGTTGAGAACCATGCAGAGACTTGCACGTTTGCAATCGCAGATTTGTTCGAGGAGGCTCAGAATGTCGGAGAAGAATCAGGCTCTTCAGCTTCAACTTCAGCGGAAACACGAAAAAGAATTTGCGAAATTAAGAGCTTCTATTGGTGAAGAATGGGATGCTAGAACACAGTCAAAGGAGCAAGTTGAAGCCAAAATACTCAACAAGCAAGAAGCTGTTTTGATAAGAGAAAGGGCTCTAGCATATGCTTTCTCTCATCAGTTACAGAGCTTTACTCTCATTTCTCCTTTTACCTGTCATCGTTTGAAGATAATATTTTTTAGACTTCTCGGGTCGGATCTAACCACTAATATATTGAACATGGCACAGTTGGAAGAACTCTTCGAAATCAGCTAA | 879 | 43.12 | MEKKGSWFCAVTKALGSESNEKKDQKTQKTKRKWFGKNKKTDVITFLEETTPLPLPSPLPALENVKLTSVENEQSKHAYSVALATAAATEAAVAAAQAAAEVVRLTTIPRFVGKSKDEIAAINIQTAFRGYLARRALRALRGLVRLKMLMEGPSVKRPVASSLRTMQRLARLQSQICSRRLRMSEKNQALQLQLQRKHEKEFAKLRASIGEEWDARTQSKEQVEAKILNKQEAVLIRERALAYAFSHQLQSFTLISPFTCHRLKIIFFRLLGSDLTTNILNMAQLEELFEIS | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 38714627 | 38715900 | + | Bda007391.1 | Bda10g00517 | 14405 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00517 | 292 | Pfam | IQ calmodulin-binding motif | 120 | 138 | IPR000048 | GO:0005515 | |
Bda10g00517 | 292 | Gene3D | - | 28 | 143 | - | - | |
Bda10g00517 | 292 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 253 | - | - | |
Bda10g00517 | 292 | SMART | iq_5 | 116 | 138 | IPR000048 | GO:0005515 | |
Bda10g00517 | 292 | ProSiteProfiles | IQ motif profile. | 117 | 145 | IPR000048 | GO:0005515 | |
Bda10g00517 | 292 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE | 1 | 253 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00517 | Bda-Chr10:38714627 | Bda15g00176 | Bda-Chr15:4321536 | 2.02E-123 | dispersed | |
Bda10g00517 | Bda-Chr10:38714627 | Bda03g01731 | Bda-Chr3:56756295 | 5.99E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00517 | - | - | mnt:21397283 | 282.337 |