Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00520 | ATGGACAATGAACTTTTTTTCAACGGTGGACACCCACCGTCGTCCCCCATCGCATTTGAGTCAACTTCTATAATGCCCGTTTGGCACCAGCTAGCTCCGCCGCCCGATTGCTCGCCGGATAAATCCTTGGACTCCTTTTTTGATCCTTTCGCATGTGTCGTCCCGTCGCCGGAGGCGTCCAATTCTCACGTTTCCGGCGAAGGGTTTAAGATTAGGGAGCTGATAGGGAAGCTCGGAGAATTTCCTGGTTACAACACTACTCCACTGAGCTCACCTCCGAAGCTTCATTCTCCAATAATGGCGGCGAATTCTAATGTAACGGAATTCTCAGGTGATCCTGGATTTGCAGAGAGGGCGGCGAGGTTTTCTTGCTTCGGAAGTAAGAGTTTCAATGGTCGAACCAGTCAGTTTCCTACTTATAGATCTATTCCATCAATGGCGGACGGAAAGCTTTCTCGAGTTTCAAGCAGCCCCTCTCTCAAAGCATTTGGATCGAATTCTTCGTTGGAATCCACGGTTTCAGAGCAAATCTCAAACGAGTTAAACTGCAGGAAAAGAAAAGCGAATTCAAAGGGAAAACCGAAAGAACCCATTCAGTTTGACGAGAATTCAAATGGTAAGCGGAGCAAAGTGAGCGAAGAGAAGAGGTGTGGAAATGGCGGCGGGAAAACAGAGGAAGAAGACGATGGAAAAAGTTGCAGAAACGAAGAGAAACCAAACAAGACGAAGAGCAACTCTAAACCTCCAGAGCCTCCAAAAGACTACATCCATGTCAGAGCCAGAAGAGGCCAAGCCACTGACAGCCATAGCCTTGCAGAAAGAGTAAGAAGAGAGAAGATAAGCGAAAGAATGAAGCTTCTTCAAGACCTCGTTCCAGGCTGCAACAAAGTCACCGGAAAAGCGCTAATGCTCGACGAAATCATAAACTACGTTCAGTCATTACAGCGTCAAGTTGAGTTCCTTTCCATGAAGTTGGCTTCTGTCAACACCCGGACGGAATCTGCCATGGATTCTCTGGTCTCCAAAGAAGTAAGTTTAAATTCTCGAATTGGGTATTCGAAATTTTCATGA | 1071 | 46.69 | MDNELFFNGGHPPSSPIAFESTSIMPVWHQLAPPPDCSPDKSLDSFFDPFACVVPSPEASNSHVSGEGFKIRELIGKLGEFPGYNTTPLSSPPKLHSPIMAANSNVTEFSGDPGFAERAARFSCFGSKSFNGRTSQFPTYRSIPSMADGKLSRVSSSPSLKAFGSNSSLESTVSEQISNELNCRKRKANSKGKPKEPIQFDENSNGKRSKVSEEKRCGNGGGKTEEEDDGKSCRNEEKPNKTKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRTESAMDSLVSKEVSLNSRIGYSKFS | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 38831959 | 38833290 | - | Bda007395.1 | Bda10g00520 | 14408 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00520 | 356 | MobiDBLite | consensus disorder prediction | 149 | 179 | - | - | |
Bda10g00520 | 356 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 264 | 314 | IPR011598 | GO:0046983 | |
Bda10g00520 | 356 | Coils | Coil | 311 | 331 | - | - | |
Bda10g00520 | 356 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 93 | 344 | IPR024097 | GO:0006355 | |
Bda10g00520 | 356 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 262 | 330 | IPR036638 | GO:0046983 | |
Bda10g00520 | 356 | SMART | finulus | 270 | 320 | IPR011598 | GO:0046983 | |
Bda10g00520 | 356 | PANTHER | - | 93 | 344 | - | - | |
Bda10g00520 | 356 | CDD | bHLH_AtBPE_like | 254 | 339 | - | - | |
Bda10g00520 | 356 | Pfam | Helix-loop-helix DNA-binding domain | 268 | 315 | IPR011598 | GO:0046983 | |
Bda10g00520 | 356 | Gene3D | - | 261 | 338 | IPR036638 | GO:0046983 | |
Bda10g00520 | 356 | MobiDBLite | consensus disorder prediction | 180 | 255 | - | - | |
Bda10g00520 | 356 | MobiDBLite | consensus disorder prediction | 149 | 255 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01075 | Bda-Chr3:10797734 | Bda10g00520 | Bda-Chr10:38831959 | 1.61E-63 | dispersed | |
Bda06g00566 | Bda-Chr6:7945300 | Bda10g00520 | Bda-Chr10:38831959 | 1.93E-47 | dispersed | |
Bda10g00520 | Bda-Chr10:38831959 | Bda13g00303 | Bda-Chr13:3849368 | 1.02E-70 | dispersed | |
Bda06g00808 | Bda-Chr6:11320119 | Bda10g00520 | Bda-Chr10:38831959 | 1.39E-31 | transposed | |
Bda11g01582 | Bda-Chr11:49101555 | Bda10g00520 | Bda-Chr10:38831959 | 1.08E-39 | transposed | |
Bda10g00520 | Bda-Chr10:38831959 | Bda04g00505 | Bda-Chr4:53632747 | 2.83E-172 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16499 | PF00010 | HLH | 2.40E-06 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00520 | - | - | zju:107426586 | 350.132 |